Oncorhynchus tshawytscha (Chinook salmon): 112252823
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Entry
112252823 CDS
T05605
Symbol
ikzf1
Name
(RefSeq) DNA-binding protein Ikaros isoform X1
KO
K09220
IKAROS family zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112252823 (ikzf1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112252823 (ikzf1)
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112252823 (ikzf1)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112252823 (ikzf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_11
DUF6487
zf-H2C2_5
zf-C2H2_REST
CPSF100_C
GAGA
zf-met
Motif
Other DBs
NCBI-GeneID:
112252823
NCBI-ProteinID:
XP_024280231
LinkDB
All DBs
Position
LG01:51176779..51201304
Genome browser
AA seq
620 aa
AA seq
DB search
MVYWVSAFIGTIQSKSQGLLPPLPKQTRPLDKSKQNASVEHRNIEMLGWKEEVQWRGEGP
RAEFHGAAAALRTSAHGAGESWKNFILQTQGIAEYLHRMETEEAQEMSQMPGRDSPPPND
VSEENDEAMPIPEDLSASSNLQHNNRGDKEGMACNIKVEARSDEENGLAIDMMMNGEEEE
ECAEDLRVLDASGAKVNGSHAGGPDSKGPYSSAGGIRLPNGKLKCDICGIVCIGPNVLMV
HKRSHTGERPFQCTQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRDALSGHLRT
HSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVKEESNQNEQREDLS
QMGSKRALVLDRLANNVAKRKSTMPQKFVGEKRLSDISFEGGPGELMQPHVIDQAINSAI
NYLGAESLRPLIQTSPTSSDMGVMGSMYPLHKPPAEGHGLSAKDSAAENLLLLAKSKSAS
SEKDGSPSHSGQDSTDTESNNEERAGVGASGLIYLTNHITSGVRNGVLPLGKEEQQRQYE
AMRASIEIASEGFKVLSGEGEQVRAYRCEHCRILFLDHVMYTIHMGCHGFRDPFECNLCG
HRSQDRYEFSSHMTRGEHRY
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtctactgggtgtcagcttttattggcacgatacaaagcaagagccaagggctgctg
cctccactccccaagcagactcgacctctggataaaagcaagcaaaatgcctcagtcgag
cacagaaacatagaaatgttaggctggaaagaggaagtacagtggagaggggagggaccg
agggcagagttccatggggctgccgcggcgcttcgaacttctgcacatggagcgggggag
agttggaagaacttcatattgcaaactcaaggaatagcagagtacctgcaccgaatggag
acggaggaggcacaggagatgtctcagatgccaggcagggacagcccccctcccaatgat
gtgtctgaggagaacgacgaggccatgcccatcccagaggacctgtctgctagctccaat
ctgcaacacaataacaggggcgacaaagaaggcatggcctgtaacattaaagttgaggct
cgcagtgacgaggagaatgggctcgccattgacatgatgatgaatggcgaggaggaggag
gagtgtgcggaagacttgcgcgtgctcgatgcctcgggggccaaagtgaacggctcccat
gcaggcggccccgacagcaagggcccctactcctcggctgggggtatccgcctgcccaac
gggaagctcaagtgtgatatctgtgggatagtttgcattggccccaatgtgctgatggtg
cacaagcgaagccacactggagagcgtccattccagtgcacccagtgtggcgcttctttc
acccagaaaggcaacctgctacgtcacatcaagctccactcaggagagaagcccttcaag
tgtcacctgtgcaactatgcctgtcgccggagagacgccctcagcggtcacctgcgtacc
cactctgttggaaaaccccacaagtgtgcctactgtgggcggagctacaagcagcgtagc
tctctggaggaacacaaggagcggtgtcacaactacctccagtgcatggggctgcagaac
agcatctatacagtagtaaaggaagaaagcaaccagaatgagcagagggaagacttaagc
cagatgggatctaagagagccttggtgctagacagactagctaataatgtagccaaacgt
aagagcactatgccacagaagtttgtaggtgagaaacgcctctccgacatctccttcgag
ggtggcccgggggaactgatgcagcctcatgtcatcgaccaggccatcaacagtgccatc
aactacctgggtgccgagtcactccgaccgctcatccagacctccccaacctcctctgac
atgggggtcatgggctccatgtaccccctccacaagccccctgcagagggccacggcctg
tcagccaaggacagcgcagccgaaaatcttctgttgctcgcaaagtccaagtcagcctcc
agcgagaaggacggctcccccagccacagtggccaggattccaccgacacggagagcaac
aatgaagagagggcaggtgtcggggcctcaggcctcatctacctgacaaaccacatcacg
tccggggtacgtaatggcgtgctgcccctggggaaggaggagcagcagcggcagtacgag
gccatgcgggccagtatcgagattgcctcggaggggttcaaggtgctgagtggagagggg
gagcaggtgagggcatatcgctgtgaacactgccgcatcctcttcctagaccatgtgatg
tacaccatccacatgggctgccatggcttccgagacccgttcgagtgcaacctctgtggc
catcgcagtcaggaccgttacgagttttcgtcacacatgacccgaggggagcatcgctac
tga
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