Oncorhynchus tshawytscha (Chinook salmon): 112252844
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Entry
112252844 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112252844
04082 Neuroactive ligand signaling
112252844
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112252844
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112252844
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112252844
NCBI-ProteinID:
XP_024280275
UniProt:
A0A8C8GTN8
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Position
LG06:complement(62623838..62688321)
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AA seq
462 aa
AA seq
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MMAVLRSGVRVFIMLLISRMLENSLLSAEVKEGEILPPTIQKLMKGYNKYLRPFFDNGPV
TVGMSLDIASIDTISEINMDYTATIFLRQRWTDERLVFEGNKSLSLDGRLVELLWVPDTF
IVDSKKSFLHDITVENRLIRIFPNGTVLYALRITTTVACNMDLTKYPMDKQTCTLQLESW
GYNINDVMFYWTRGNESVSGLDTLRLAQYTVEDHYTSASEAIYETGHYPKLIFHFELKRS
ILYFILETYVPSSLLVVLSWVSFWISQSSVPARICIGVTTVLTMTTLMMGARTSLPNANC
FIKAIDVYLGICFSFIFGALIEYAVAHFCTLNHPDANIVMYGHQMGGFDEEMNGMVTTIA
AENNRAKRRKEKAASDEAALAPTAELELYPSSPTGSEPKPEAPEEPPNRCLIVLVLLRKV
LRRAANCCHVENPHLIDNYSRMTFPLSFVFVNLLYWTYYLYL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgtgctccgctctggagtgagagtgttcatcatgctcctcattagcaggatg
ttagagaactcgctgctcagcgctgaagtgaaagagggagagattctgcctcccaccatt
cagaagctgatgaaaggatacaacaagtacctcaggcctttttttgacaatgggccagtg
actgtgggcatgagtttggacattgccagcattgacaccatatcagagatcaacatggac
tacacggccactatcttcctgcgtcagcgctggacagacgagcgcctggtgtttgagggt
aacaagagcctgagtctggacggcaggctggtggagctgctctgggtaccagacaccttc
attgtagactccaaaaagtccttcctccatgacatcactgtggagaacagactgatcagg
atcttccccaatggaacggtgctctacgccctgaggataaccaccactgtggcctgcaac
atggacctgaccaagtaccccatggacaagcagacctgcactctgcaactggagagctgg
ggctacaacatcaatgatgtgatgttctactggaccagagggaatgagtcggtcagtggt
ttggatacgctgcgtctggctcagtacacagtagaggaccactacacatctgcgtctgag
gccatctatgaaacaggccactaccccaagctgatcttccactttgagctgaagagaagc
atcctgtacttcatcctggagacgtacgttccctccagcctgctggtggtcctctcctgg
gtctctttttggatcagccagtcttccgtccccgcaaggatctgtatcggagtgaccacg
gttctgaccatgaccacgttgatgatgggtgccaggacgtccctgcccaacgccaactgt
ttcatcaaagccatcgacgtgtacctgggcatctgcttcagcttcatctttggagccctg
atcgagtacgccgtggcccacttctgcacccttaaccatcccgacgccaacattgtcatg
tacggtcaccagatgggaggctttgacgaggagatgaacggcatggtcaccaccatcgcc
gctgaaaacaacagagccaagaggcgtaaggagaaagctgcttcagatgaggcggcctta
gcgcccacagctgagctggaactttacccctccagccccactggcagtgagcccaagcct
gaggcccctgaggagccccccaaccgctgcctcattgtcctggtcctcctccgcaaggtc
ctgcgcagagctgcaaactgttgccatgtggagaatccccacttaatagacaattactcc
aggatgaccttccccctgtcctttgtattcgtcaacctcctctattggacatactacctg
tacttgtaa
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