Oncorhynchus tshawytscha (Chinook salmon): 112252893
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Entry
112252893 CDS
T05605
Symbol
tjap1
Name
(RefSeq) tight junction-associated protein 1 isoform X1
KO
K06105
tight junction protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112252893 (tjap1)
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Gene cluster
GFIT
Motif
Pfam:
Pilt
HIP1_clath_bdg
OmpH
Bacillus_HBL
Med9
Motif
Other DBs
NCBI-GeneID:
112252893
NCBI-ProteinID:
XP_042179444
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Position
LG06:complement(65372287..65451069)
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AA seq
1008 aa
AA seq
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MTVGVTANQAARDLQGMRRFLSRSEGLLALSGDEDVRSDDSQRGGYSTSPAQSSRSLERS
LVFKDNAEILVPRGGQHHQQTSFQRLALPPPKGILKQPNQLGVHFSDLRKSKSAEMLGQS
RGRKPQRRSLAKTTSTRQITPSSTSQSSATSERMIQFLENKLKFSNFLDDVTTRLISPAR
MQMLGGKQQEDTRPVKGNQPPHQAHNSPLTPEAKKKRGTERNPAMSRPWDEWSSALDRDR
PSRKEKGRPKTWHPTPKDIPDQNAEKCRADPLREGARPKAEGPIYSRVGGGGDSSSRRCS
ETDCEDKSRQRDHHQKKRHQSSQLDTRTQHKDAMDKPTAKYVPQPPHSETVSQHLSFSIF
SQVKDSLSDADRIKILQQQNEELRRRLSHTTHKMEAMETEFETSRHYMQGEMGRTRDDLE
KMRDKFRRLQNSYTASQRANQDLEEKLHSLLRKVERDKKTTDQEIVELTNKLLDAKNTID
KLEELNERYRQDCNLAVQLLKCNKSHFRNHKFADLPYELQDMVNKHMKASLPDKSSQGAQ
GQDSDTMSLTPADVVPTSVIARVLEKPEPLVLNSAQSSSSAGRPQAEDVFVHVDMTGPQA
EAGRGGRENGGPRHSSRVPAQSNQAQELLQQNGMCRSQSSLSADGQPGEEGGGAFEKLNP
YPAPPPPHPLYPGRKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEENERQRT
VPNSPAVSDGGWRSGASSSSGGGGHRDPCRTPTQLDTADPISSQSSPFSSPPQPPSAFAS
SGSSEEDLLANWQRMFVEKMAPSSEGTLVNRTSFSSETVKDLERTRTCKPGGGGSHRGAL
RGAYSDGEEGSSTRSWTASRESSLDTDTSSMADLRNRRGHYGADFSTEESEQLLMALDND
QDDASGDTVSMAITVETSLAEAKRNEFVEETGSVGSSAEERDILPQDFPVIVPRVLAGLE
DYTENTPPLTSNSSTSGRPLKSPKRMGVHHLHRKDSLTRAQEHGNLLD
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgggcgtcacagctaaccaggcagccagagacttgcaggggatgagacgattc
ttgagccgcagtgagggcttactcgctctctctggagacgaagacgtccgctcagatgac
tcccagcgaggtggctactctacctctccagcccagtccagtcgcagcctggagcgctca
ctggtcttcaaggacaatgcagagatcctggttcccagaggaggtcagcaccaccagcag
acttccttccagagactagccctccctcctcctaaggggatcctaaagcagcccaaccag
ctgggcgtccacttctcagacctcaggaagtccaagtctgctgagatgctgggccagagc
cgaggccggaagccccagaggaggtctctggccaagaccacctcaaccagacagataacc
ccgtcctccacctcgcaaagctcagcaacctcagaaagaatgatccaattcctagaaaat
aagctgaagttctccaacttcctggatgatgtcaccaccaggctcatcagccctgccaga
atgcaaatgctgggtggaaaacagcaagaggacacaagaccagttaagggaaaccagcct
ccgcaccaggcacacaattctcccctgactcccgaagcgaagaagaagcgaggaaccgag
aggaaccctgcgatgagccggccgtgggacgagtggtcctcggcgctggacagggacagg
ccttccaggaaggaaaaaggtcgaccaaagacctggcaccccaccccgaaggacatccct
gaccagaatgcagagaagtgtagggcagacccccttagggagggagcgaggcccaaagct
gaggggcccatctacagccgtgtggggggtggcggggactccagctctcgacgctgcagt
gagactgattgcgaggacaagagtcggcagagagaccatcaccagaaaaaacgtcaccag
tcctctcagctggacaccagaacacagcacaaggacgctatggataaacccacagctaaa
tacgtgccccagcctcctcactctgaaacagtatcacaacacctctctttttctattttc
tcacaggtcaaggactccttatcagatgcagacaggatcaagatcctacagcagcagaat
gaagagcttcgccggcggctctcccacaccacccacaagatggaggccatggagacagag
tttgagaccagccgccactacatgcagggggagatgggtcgcacgcgcgacgacctggag
aagatgagagacaagttccgcagactgcagaacagctacaccgcctcccagagggccaac
caggacctggaggagaagcttcattccctgctccgtaaggtggagagagacaagaagacc
acggaccaggagatagtggagctcaccaacaaactcctggacgccaagaacaccatcgac
aagctggaggagttgaacgagcgctatcggcaagattgcaatttggccgtgcagcttttg
aagtgcaataagtcccatttcaggaaccacaagtttgcagatctgccctatgagctgcag
gacatggtgaacaagcacatgaaggccagtctaccggataagagttcccagggggcccag
ggccaggactccgacaccatgagcctgacgcctgccgacgtggtgcccacctccgtcatc
gcccgtgtactggagaagcctgagcctctggtgctcaactctgcccagtccagcagcagc
gcaggccgaccccaggcagaggacgtgtttgtgcatgtggacatgactgggccccaggcc
gaggcaggaagagggggtcgagagaatgggggtccccgccacagcagcagagtcccagcc
caaagcaaccaggcacaagagctcctccagcagaacggaatgtgtcggagccagagcagc
ctgtcagcagacggccagccaggagaggagggtggtggggcctttgagaagctcaacccc
tacccagccccccctccgccccatcccctctaccccggccgcaaggtgattgagttctcc
tcggatgacaaggtgaagatccccaagaacagccccctgcccaactgcacctacgcaacg
cgccaggccatctccctcagcctggtgcaaaatgacgaggagaacgagcgccagcgcact
gtgcccaacagccccgctgtgtcggacgggggctggcgctctggggcttcctcctcctca
gggggaggggggcatcgtgacccctgccgcacacctactcagctggacacagcagacccc
atttccagtcagtccagccccttcagcagcccccctcagccccccagtgccttcgccagc
tcaggcagctctgaggaagacctgctggccaactggcagcgcatgtttgtggagaagatg
gcaccatcctctgagggcaccctggtcaaccgcacctccttcagcagcgagacagtcaag
gacctggagaggacccggacctgcaagccagggggcgggggatcccacaggggggcacta
cggggagcctactcggacggggaggaggggtcctccactcgcagctggacagctagccga
gagtccagcctggacactgacaccagcagcatggctgacctccgcaacaggaggggacat
tatggagcagacttctccacagaggagagcgagcagctgctgatggccctggacaacgac
caagacgacgccagtggcgacaccgtgtcaatggccatcactgtggagaccagcctggcg
gaggccaagaggaatgagtttgtggaggagactgggtctgtaggcagctctgcagaggag
agagacatcctgccccaggacttccctgtcatagtacccagggtcctggccgggctagag
gactacacagagaacacccctcccctcacgtccaactcctccacttccggccgacccctg
aagagcccaaagaggatgggagtccaccacttgcaccgcaaagacagcctgactcgggca
caagagcatggtaacctgctggactga
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