Oncorhynchus tshawytscha (Chinook salmon): 112252916
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Entry
112252916 CDS
T05605
Symbol
psda
Name
(RefSeq) uncharacterized protein psda isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112252916 (psda)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112252916 (psda)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112252916 (psda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
112252916
NCBI-ProteinID:
XP_024280382
LinkDB
All DBs
Position
LG06:66094630..66138754
Genome browser
AA seq
1691 aa
AA seq
DB search
MSQSGKILHLYVEVRSVPEEEGKELGGGVEGIHPLVLQEPDILPQSQRTPSHSTCTCTST
PSPTSMSPGVVHNVGGSTPSLTPSKSSSRHSVSFQLDLPDNSGPPIHHRQSLPYEGTGQL
LSTLQPAPNGPQHGTLVRPRSSDIEHYQGRVPISPACSGIITAPSTPTSGCRFYDSSGVG
DEGKRSVVSFSYIEKASIKSVDSPCSALCQSIPENNFSRGMEEGYLPARLRKRLSDPVWS
DSWKPSGSSSPKLSPKGSPCLRRSTLDTVAREATYRAMEEFGSPELRRRLAAYSPDQSPS
FPRHYQQQLRCKSWVGSPVLPQGTKTMPVNPHLTDPDRNRGLNGLPRSPASDQLFVQDRQ
SYYKYTMSPSSVRHHYGVHNHRPGLGDESPSLSSKFRPPLPTGRPTAIQHDIPASMSTST
SASCNQRTSSQTSSYTPSDSHCLPNKVNSRPSDQSNGSKLGEGLNQTSGRRSISQASIPD
KARKLAEEVTKLPTILMDRRTPSPTPFQTDSAKSESPRPGYLSRKSQPYTTLQGTGSPAQ
PHPEANSNTHLQDHRWTDKESPSVGCHSRESRPGQGSGQASPLLQQKGISSPTIPAMLHP
VVASQTPIIDPRLQRAELVAKDSPTLHRHQPPQYMGDRGSPGLYRRQCDTLFDRGDPRDS
PESSRRLVIGLDMETPDSWTSRMQQWRENVSVTDQDESNREDQTADGDGLCVVTKEELMQ
QGRDEAAVLGDKHGVNRGETQDHSGLLGSSQSSSGVTGSLEENSQPERDCLSPETSSQSS
QKSNDTEDTASGMQSDSHYSVLGPSLHSQRIAHAKWEFLFGQPTEDCHDSKAPPRGTSSE
SPKPTPPSSLPLKPTNHWRGLDDEGQSLSYHNVQQVEVELVTPPPVAVVGISPKMGIIRK
TIKYSETDLDAVPLKCYRETDLDEVMLAEARAEREREQEEVEVDSAFGSNRSVLATSASS
ASTIVHTDGEVEELEEEMVSWASVRMQGDKKRQHATHEDNQTYSLLMKGCPLDYISDSHS
ALKSPISLTSPRRTSADGLDSFSHHFESIVESHRAKGTSYSSLDSVDLLTSSGPHVFTFD
LPTLTPEIQSQICESARHITELSFAPLAHPEPPRVSVPVRSENTLAPTGDGLSSYSEDST
SGGKSWLEKVSMKTNLDFPLIREKPGHRAPDLFPQQDVGEHLALGSTESLSNGNKADLQA
AKRLAKRLFNLDGFRKSDVARHLSKNNEFSRMVAEEYLSYFNFSGLTIDQAIRAFLREFA
LMGETQERERVLAHFSRRYLQCNPNAIPSEDSVHTLTCALMLLNTDLHGHNIGKKMSILQ
FISNLEGLNDGKDFPRELLKALYNSIRNEKLQWTIDEEELRKSFSELADLRTDSASHTMK
RIGGGLGVAQNPDALIYKNGFLVRKVHADSDGKRTPRGKRGWKTFYVMLKGLVLYLQKGE
YRPDKQLSEEDLKNAVSIHHSLAMRAADYSKRPNVFYLRTADWRVFLFQAPNAEQMQSWI
TRINVVSAMFSAPPFPAAIGSQKKFSRPLLPGSNTKLSQEEQVKSHETRFRTISSELIEL
TAVIPDKKAKVRDLEEHKQREEYLEFEKTRYGTYAMLLRSKIRSGEEDLSLFESRLFDDG
GLQRAHSSPTLREEHSSSSQASSTREGGSSSSSQVSSAKGGASSSSSSTRGSSKTKRSEP
QRHSYRQAVKQ
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctggcaagatcctgcacctgtatgtggaggtgaggtctgtcccggaggaa
gaagggaaggagttggggggtggtgtggaggggattcacccactagtgctccaagagccg
gacatcctacctcagtcccagcgcacccccagccactccacctgtacctgcacctccacc
cccagcccaacctccatgtcccctggagtggtgcataatgttgggggcagcactcccagc
cttaccccctccaagtcctcctcgagacactctgtcagtttccagctggacctaccggac
aactcgggaccgcccatccaccacaggcagagtctgccttacgaggggactggtcaactg
ctctccactctccagcctgcacccaatgggccgcagcatggaactctggtgcgcccccgc
tcctcagacattgagcactaccaagggagggtgccaatatcccctgcctgctctgggata
ataactgccccctccactccaaccagtgggtgcaggttctacgatagctctggtgtgggg
gatgagggcaaacgctctgtggtcagctttagctacatagagaaagccagcattaagtct
gtggacagcccctgcagtgctttgtgccaaagtatacctgagaacaacttcagtagagga
atggaggaggggtatctgcctgcccgcctcaggaagaggcttagtgaccctgtgtggtca
gacagctggaagccctccggtagctccagccccaaactgtcccccaagggctccccctgt
ctccgtaggtccactctggacactgtagccagagaagccacctacagggccatggaggaa
tttggctccccggaactgaggcgcagactggcagcctacagcccagaccagagccccagc
tttccacggcactaccagcagcagctccgctgcaagtcctgggtagggtccccagtcctg
ccccagggtaccaaaacaatgcccgtcaatccacacctcacagacccagacaggaaccgc
ggtttaaatggcctccccagaagcccagcttctgaccagctcttcgttcaagacaggcag
tcctactacaaatacaccatgtccccctccagtgttcgccaccactatggtgtccataac
cacaggccaggcctgggggacgagagccccagcttgtcctccaagttccgcccgccttta
cctacagggaggcccactgcgattcagcatgacataccagcaagcatgtctaccagcacc
tcggcctcttgcaaccagaggactagcagccaaaccagcagctacactcctagcgatagc
cactgcttacccaacaaagttaactccagaccgtcagatcagtcaaatggcagcaagctg
ggagagggattgaaccagaccagtggcaggagaagtatctcccaggcctctatccctgac
aaggcccgtaagctggcagaggaagttaccaagcttcccaccatcctcatggacaggagg
actccctcccccaccccgttccagactgactcggctaagtcagagagccccaggcctggc
tacctctctaggaagtctcaaccctataccaccctccagggcacgggttctccagcgcag
ccccaccctgaagctaacagtaacacccatctccaggaccacaggtggacagacaaggag
tctcctagtgttggatgccactccagagagtccagaccaggccaaggctcggggcaagcc
tcccccctcctacagcagaagggcatctcctcccctactataccagctatgctgcaccca
gtggtggcgtcccagacccctatcatagaccctcggctgcagagagctgagctggtggcg
aaagacagccccaccctgcaccgccaccaacccccacagtacatgggagaccggggctcc
cctggcctgtataggagacagtgcgacaccctctttgacagaggggatccaagggacagc
ccggagagcagcaggcgcctggttataggccttgacatggagacaccagacagctggacc
tccaggatgcagcagtggagggagaacgtgtccgtcacggaccaagacgagtccaatagg
gaggatcagactgctgatggtgatggattgtgtgtggtgaccaaggaagagctgatgcaa
caggggagggatgaagcagctgtgttgggggataaacatggggtaaacaggggggagacc
caggaccatagcggattgctggggtcttcccaaagctccagtggagtgacaggcagtcta
gaggaaaacagtcagccagagagggactgtctctctccagagacatccagccagtccagc
cagaagagcaatgacactgaagacactgcttctgggatgcagtcagacagccactactct
gtgctgggcccgtccttgcactcccagaggattgcccatgccaaatgggagttcctgttc
ggacagcccacggaggactgccacgattctaaagccccccctaggggcacctccagcgag
tctcccaagcctacccctccctcctccctgcccctgaagcccacaaatcactggaggggg
ctggacgatgagggacagagtttatcctatcacaacgtccagcaggtggaggtggagctg
gtgactccgcccccagtcgctgtggttggcatctcacccaagatgggcatcatacggaaa
accatcaagtactctgagacggacttagatgcggtgcccctgaaatgctatagggaaaca
gacctggatgaggtaatgttagctgaggcccgggcagagagagagagagaacaggaggag
gtggaagtggactctgcctttgggagtaatcgcagcgtgctggccacctcggcctctagc
gccagtaccatagtccacactgacggagaggtggaggagctagaggaggagatggtgagc
tgggccagtgtgaggatgcagggggataagaagagacaacatgccacccatgaggataat
cagacgtacagtctgctgatgaagggttgtccattggactacatatcagattcccattca
gcactcaagtcccccatctcattgaccagccctcgcaggacctctgcggatggccttgac
tcctttagccaccactttgagagcattgtggagtctcaccgggctaagggcacctcttac
agcagcctggacagcgttgacctcttgacctccagcggcccgcacgttttcacatttgac
cttcccaccctcacccctgagatccagagccagatatgtgagagtgcgcgtcacatcacg
gagctgagttttgcccccctggcccatccagagcctcccagggtgtctgtccctgtccgg
tctgagaacaccctggcccccacaggagacgggctcagtagctactctgaggattctact
tcaggagggaagtcctggttggagaaagtctcaatgaaaactaacttagactttcctctc
attcgggagaagccaggccaccgggctccagacctgttcccacagcaggacgtgggcgag
cacttggccctgggcagcaccgagtccctgtccaacggcaataaggctgacctgcaggct
gccaagcgcctggccaaacgcctgttcaacctggatggcttcaggaagtctgacgtggcc
aggcacctcagcaagaataatgagtttagtcggatggtggcagaggaatatctcagttac
ttcaacttctcaggccttactattgaccaggcaatacgagccttcctgagggagtttgcc
ctcatgggagagacacaagagagggagcgagtgctggcccacttctctaggagatatcta
caatgcaacccaaatgcaataccttctgaagacagtgtccacactctgacctgtgccctg
atgctgctcaatacagacctgcatggccacaatattggcaaaaagatgtccattctgcag
ttcatcagcaacttggaaggactaaatgatggaaaagattttcctagagaactgctcaag
gccttgtacaattccattagaaacgagaagctccagtggaccatcgacgaggaggagttg
cgcaagtccttttcagagttggccgatttgcgcaccgactccgcctctcacaccatgaag
cgaatcggcggtggtctaggcgtggcccagaatcctgacgccctgatctataagaatggt
ttcctggtgcggaaggtccacgcagactctgacggcaagagaacccctcgaggtaagaga
ggatggaagactttttatgtcatgctgaagggattggtcctttacctgcagaagggagag
taccgtccagataagcagctgtctgaagaggatctgaagaacgctgtgtccatccaccac
tctctggccatgagggcagcagactacagcaagaggcccaacgtgttctacctgcgcact
gcagactggcgagtgttcctcttccaagcacctaatgcagagcagatgcagtcgtggatc
acccgtatcaacgtggtctcagccatgttctcagcgccacccttccctgctgctatcggc
tcccagaagaaattcagccgcccgctactgccaggctccaacaccaaactgtctcaggag
gaacaagtgaaatcccatgagacccgtttccggaccatctcctctgagctgatcgagcta
actgctgtgattccagacaaaaaggccaaagttcgtgatctggaagagcacaagcaacgt
gaggagtacctagagtttgagaaaacacgctatgggacgtacgcaatgctactgaggtct
aagatccggagtggggaagaggacctgtctctgttcgagtcacgcctctttgacgatggg
ggtctccagagggcccactccagccccactctgcgggaggagcacagcagcagcagccag
gccagcagtaccagggaggggggaagcagcagcagcagccaggtcagcagtgccaagggg
ggggccagcagcagtagttccagcaccagggggagcagcaagaccaagcgctctgagccc
cagagacacagctacagacaggctgtcaaacagtga
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