Oncorhynchus tshawytscha (Chinook salmon): 112252946
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Entry
112252946 CDS
T05605
Name
(RefSeq) lymphocyte-specific helicase isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112252946
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112252946
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Shugoshin_C
CdiI
Motif
Other DBs
NCBI-GeneID:
112252946
NCBI-ProteinID:
XP_024280435
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Position
LG06:complement(67016509..67028276)
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AA seq
854 aa
AA seq
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MSCVKEETRSMSPHCPKPNESEEPLGTAMEETLPENAAASVEAEDVVSAVVITKEMEEEE
KQLMEKGEKQEEEIMKKAREAREKESHDIRFKRLQHLLEKSNIYSKFLLTKMEQQQQEEM
LKKERLEKTHKGTGKKTGRVERKKRKREEDYKIADVMSKEEIMSKAKKPKVEDEEVLGKK
KLEAEDIEKMSDSNADIKGRLSEAVRDNAKQLLDPDRKVNGQAVPAQQPLLFTGGVMRSY
QIEGVEWLRMLWENGINGILADEMGLGKTIQCIAHVAMMLERKVLGPFLVVAPLSTLPNW
INEFKRFTPEVSVQLYHGPAKERMSLLKQIRKPQGPHNMCPVVVTSFEIAMIDRKFLQRF
QWKYLIVDEGHRIKNLNCRLVRELKMLPTDNKLLLTGTPLQNNLAELWSLLNFLLPEVFD
DLKSFESWFDIDTIGSNAKQVVANEREQNILHMLHQILTPFLLRRLKSDVTLEVPPKKEI
VVYAPLTAKQESFYTAVVNKTIAKMLGQEKGEAPVVLTTDGRPKRRTRKPVDYKETDGDT
PYDLEKYLERVQKEAELSPAPVVDVQMPLDSQINLKLQNILMLLKRCCNHPYLIEYPLDP
ATQEFKIDEQLVQTSGKFLILDRMLPELKRRGHKVLIFSQMTSILDILMDYCYLRGYQYS
RLDGTMAYADREENMTKFSSDPEVFLFLLSTRAGGLGINLTAADTVIIFDSDWNPQADLQ
AQDRCHRIGQTKPVVVYRLVTANTIDQKILERASAKRKLEKMVIHKNKFKGGKAELKQTK
SCVDVSELMDLLSARDYEKEVKSTTGKVISDEDLEFLLDRSDLLDKAKRSSKQKVGVFKV
IEAKESSEINLTRV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagttgcgtaaaggaagaaacccgaagcatgtctcctcattgtccaaagcctaacgaa
tctgaagaaccgctgggtacagctatggaggagactttgcctgaaaatgcagctgcaagt
gtggaagctgaagatgtagtgtctgcagttgtcatcacaaaagaaatggaggaagaggag
aaacaattgatggagaaaggagagaaacaagaagaggagataatgaaaaaggctcgagaa
gctcgggagaaggaatctcatgacattcgcttcaagaggctgcaacacttgctggagaaa
agtaacatctattccaaattccttcttaccaagatggagcaacagcagcaggaggaaatg
ctgaagaaagagagactggaaaagacacacaagggcactggcaaaaagactggaagagtt
gaaagaaagaaaaggaagagggaggaagattacaaaattgctgatgtcatgtctaaagag
gaaattatgtccaaggccaagaaacctaaagtggaggatgaggaggtccttgggaagaag
aagctagaagcggaagacattgaaaagatgagtgactcaaatgctgacatcaagggccgt
ctgtcggaggctgtgagagacaatgccaaacaactgctggacccagacaggaaagtgaac
gggcaggccgtgcccgcccagcagcccctgctcttcactgggggggtcatgaggtcgtac
cagatagagggcgtggagtggctcaggatgttgtgggagaatggtattaatgggatcctg
gcagatgagatgggtctggggaagaccatccagtgcatcgcccacgtggccatgatgctg
gagagaaaggtgctgggacccttcttggtagtggcccccctgtccactctgcccaactgg
atcaatgagttcaagcgcttcactccagaggtgtccgtacagctgtaccatgggcctgct
aaggagaggatgtcgttgttaaagcagattcgtaagccccaggggcctcacaatatgtgc
cctgtggtggtcacctcctttgaaattgccatgatagacaggaagtttctgcagcgcttc
cagtggaagtacctgatcgtggacgagggccacaggatcaaaaacctgaactgccgactg
gtgagggaactcaagatgctgcccacggacaacaaactgctcctgacaggcacgccgctg
cagaacaacctggctgagctctggtcactgctcaacttcctcctgcctgaggtctttgac
gacctcaagagctttgagtcgtggtttgacatcgacaccattggatcgaatgcaaaacaa
gttgtggctaacgaacgagagcagaacatcctgcacatgctccaccagattctgacgccg
ttcctgctacgacgactgaagtctgacgtgacgttggaggtgccgcccaagaaagagatt
gttgtgtacgccccactcactgccaaacaggagtctttttacactgctgtggtcaacaag
accattgccaaaatgctgggccaggagaagggggaggccccagtggtgctgacgactgac
ggcaggcctaagcgcaggaccaggaagcctgtggactacaaagagactgatggtgacacg
ccctatgacctggagaaatacctggagagggttcagaaggaggcagagctgagccccgcc
ccggtggtggatgtgcagatgcccctggactcccagatcaacctgaaactgcagaacatc
ctcatgctgctgaagaggtgctgtaaccacccctacctcatagagtacccactggaccca
gccactcaggagttcaagattgatgaacaactggtgcagacctctgggaagttcctcatt
ctagacagaatgctgccagagctgaagaggaggggacacaaggtgctgattttcagccag
atgacgtccatcttggatatcctaatggactactgctacctgcgtggttaccagtacagc
cgactggacgggacaatggcttatgccgacagagaggagaacatgacaaagttctcgtct
gacccagaggtgttcctcttcctactgagcaccagagcaggtggcctgggcatcaacctg
actgctgctgacacggtcatcatctttgacagtgactggaacccccaggcagacctgcag
gcccaggataggtgccaccgcatcgggcagaccaaaccagtggtggtgtatcgcctggtc
actgccaacaccatcgaccagaagatcctggagagagcctcagccaagaggaaactggag
aagatggtcattcacaagaacaaattcaaaggaggaaaagctgagctcaaacagaccaag
agctgtgttgatgtgtctgagctgatggatcttctcagcgcaagagattacgagaaggag
gtgaaaagcaccacggggaaggtcattagtgacgaggacctggagtttctgctggaccgc
agtgacctactagacaaggccaagaggagctcaaaacagaaggttggcgtcttcaaggtt
atcgaagccaaggaatcatctgagatcaacttgaccagagtttga
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