Oncorhynchus tshawytscha (Chinook salmon): 112252950
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Entry
112252950 CDS
T05605
Name
(RefSeq) core histone macro-H2A.2 isoform X1
KO
K11251
histone H2A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
otw04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112252950
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112252950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112252950
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112252950
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
Histones
112252950
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112252950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macro
Histone_H2A_C
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
112252950
NCBI-ProteinID:
XP_024280468
LinkDB
All DBs
Position
LG06:67322916..67328997
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AA seq
375 aa
AA seq
DB search
MSARGGKKKTTKLSRSARAGVIFPVGRMMRYLRTGTHKYRIGMGAPVYMAAVIEYLAAEI
LELAGNAARDNKKGRITPRHIKLAVANDEELNQLLRGVTISNGGVLPRIHPELLSKKRGS
RVKVDTQVTVPEKRAERVKSIKKPTTKKGKGKPGRKQRKNTENDKEAVVANSTVEDGPGD
GFTILSAKSLFLGQKVSLNLSLTESEISKIGTIKVEGIINPTNAEMDLKEGVGSALEKAG
GRDFLEAVKELRKAQGPLEVASVAVSQASGMPARFVIHCNIPQWGSEKCEDQLEKTVKAC
LSAAEEKKLKSVAFPSLPAGRNGFPKQTAAQLILKAISNHFVSATTSSLKNIYFVLFDSE
SIGIYLQEMAKLDAK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcccgaggaggaaagaagaagaccaccaaactgtcccgctccgccagagcagga
gtcatctttcctgtggggaggatgatgaggtatctacgcacagggacgcacaagtaccgc
atcggcatgggggcacccgtctacatggcagccgtcatagagtacctggcagctgagatt
ttggagttggcagggaatgcagcaagggacaacaaaaaaggcagaataactcctcggcac
attaaactggctgtcgccaatgacgaggagctcaaccagcttctcagaggggtgaccata
tcaaacggaggggttctgcctcgcatccaccctgagctgctgtccaagaagaggggcagc
cgagtgaaagtggacactcaggtgaccgtgccagagaagagggcggaacgcgtcaagagc
atcaagaaacctaccaccaaaaaaggcaaaggcaaaccaggtcgcaagcagaggaaaaac
acggaaaacgacaaagaggctgttgtcgctaactcaacagtggaagacgggccaggggat
ggcttcactatcctctcagcaaaaagcctgttccttggacaaaaggtatcattaaatctt
tcactaacagagagtgaaattagcaaaattggaaccatcaaggtggagggaatcatcaac
cccacaaatgcagagatggacctcaaagagggagtgggcagtgccctggagaaggcaggg
gggcgagacttcttggaggcagtaaaagaactgcggaaagcacagggacctttggaggta
gcttcagttgcggtgagccaggccagtgggatgccagctcgttttgtcatccactgtaac
atccctcaatggggctcagagaagtgtgaggaccagctggagaagactgtcaaggcctgc
ctctctgcagcagaggagaagaaactcaagtccgttgccttcccctcacttcctgctggc
cggaatggattcccaaagcaaacagccgcccagctgatcctcaaggccatctccaaccat
tttgtctctgcgacgacctcctccctgaaaaacatttactttgtactgtttgacagcgag
agcatcggaatataccttcaggaaatggccaagctggatgccaagtga
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