Oncorhynchus tshawytscha (Chinook salmon): 112252962
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Entry
112252962 CDS
T05605
Symbol
exo1
Name
(RefSeq) exonuclease 1 isoform X1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112252962 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
otw03032
]
112252962 (exo1)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112252962 (exo1)
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
112252962 (exo1)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
112252962 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
112252962
NCBI-ProteinID:
XP_024280494
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All DBs
Position
LG06:complement(67988266..67996691)
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AA seq
807 aa
AA seq
DB search
MGIQGLLQFLKDASEPISVRKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVTYCM
KFVDMLLSFGVKPILVFDGCNLPSKQEVDKARRERRQANLQKGKQLLREGKISEARDCFT
RCVNVTPSMAHDVIKAARTRGVDCVVAPYEADAQLAFLNKAGIAQAIITEDSDLLAFGCK
KVILKMDKQGNGLEIDQNHLGRCRSLGDVFTEEKFRHMCILSGCDYLSSLYGIGLGKACK
LLRMANNPDIIKVIRKIGQYLKMNVVVPDEYIDGFVKANNTFLYQLVFDPIKRKVVPLNP
YPEHMDPATLSYAGRNLGDCKGLQVALGNLDINTMERIDDFNPDATNVKPVKPRSRDWND
SQETRASTHPSIWSRGYIPGTLSASQPVGSPQRPPSTRGKERVISVQGLRLPHKNTQVKR
PREDSGVSDQDVLQQYSPSGQKRSRGEEDPGPRESHQISTCPQPSATAAATHPRPRNRFA
TLLQRRNQEGGGEGQEMQSRFFCSGSSSSEVGSQNPESFVKGEVSQDEVTQDPREDYCIR
GYADTEENDSVDPHSPPPSPLSASQGLGVFRWSGSSSERSRTPTPTSGLSGLQQFQRKKE
SFSWSQEGQRTRKTPGAPSPILGKEDKDSPPNSPPSQDSAYFSQHNHTSCNVVEVSPPTR
LEDATRPKIYSSKDSDSVKSLSSSPTADEKKSSTMRPKVAGLPRMKPGDQGKGTKIRPSA
PARASGLRKKPAGPGKKLPTNNENNPGLQATISGLWKNFGFKKENPKINPCKKGEPMSPV
KDNVLALTPETDKDIYLISSVQKTICL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggggatccaggggctgttgcagttcctcaaagatgcctcggagcccatcagtgtgagg
aagtacaagggacagacagtggccgtagacacatattgctggcttcataaaggggcattt
tcttgtgcagagaaacttgccaaaggggagccaactgaccagtatgttacatactgcatg
aaatttgtggacatgctgttgtcttttggtgtgaagcccatcttggtgtttgatggctgc
aatctgccttcaaaacaggaggtggacaaagctcgcagagagcgtcgtcaggcaaatctg
cagaaaggtaagcagctcctacgtgagggaaagatttcagaggccagagactgctttact
cgctgtgttaacgtcaccccttccatggcccatgatgtcatcaaggctgcaaggaccaga
ggagtggactgtgtggtggccccgtatgaagctgatgcccagctggccttccttaacaag
gctggcattgcacaggctatcatcactgaagactcagacttattggcgtttggctgcaaa
aaagtgatcctaaagatggacaaacaggggaacggtctagagattgaccagaaccacctg
gggcggtgccgctcactgggtgacgtcttcacggaagagaagttccgccacatgtgtatt
ctctctggctgtgactatctgtcctcactctatgggattggcttgggcaaagcctgtaaa
ctgctgaggatggcaaacaacccagacatcattaaggtgataaggaagattggccagtac
ctgaagatgaatgtggttgtgccagacgagtacattgacggctttgttaaggccaataac
accttcctctaccagctggtgtttgaccccatcaagaggaaggtggtgcctctcaacccc
tatccagagcacatggaccctgccaccctcagctacgctggccgtaatttaggagattgc
aaaggtttacaggtggccctgggtaacctggatataaacaccatggagaggattgatgac
ttcaacccagatgctacaaatgtcaagccagtgaaaccacgcagtcgtgactggaatgac
agccaggagactcgggcctctacacaccctagcatctggagcagaggttacataccaggc
accctctctgcctcccagcctgtgggctctccacagaggcctccctcaaccagggggaag
gagagggtcatcagtgtgcaggggctgaggcttccacacaagaacacacaggttaagaga
cccagagaagactctggtgtttcagaccaggatgtgctgcagcagtactctccctccggt
cagaagcggtccagaggggaggaggaccctggacccagagagagccatcaaatctccaca
tgcccccagcccagtgccactgctgccgctacccatcccagaccacgcaaccgcttcgcc
accctgctacagaggagaaaccaggaaggaggtggagaagggcaggaaatgcaaagcagg
ttcttctgtagtggcagcagctccagtgaggtgggcagccagaatccggagtcttttgtc
aaaggggaagtgtctcaggatgaggtcacacaggaccccagggaggactattgtatcagg
ggatatgctgatacagaggaaaatgactctgttgaccctcatagcccacccccctcccct
ctgtctgccagtcaagggttaggggtgttccgctggtcaggcagctcctcagagagatcc
aggaccccgacacccacatccggcctctcgggactgcagcagttccagcgcaagaaggaa
agcttctcctggagccaggaaggccagagaactcggaagacccccggagccccatcccct
attctgggaaaagaagacaaggattcaccaccaaactctccaccgtctcaggacagtgcc
tacttctctcagcataaccacacttcctgcaatgtcgtggaagtgtccccacccactcgg
ctggaggatgccaccaggcctaaaatttactctagtaaggattcagactctgtcaaaagc
ctcagttcctctccaacagcagatgaaaagaaatccagcacaatgagaccgaaggtggca
ggtctcccgcggatgaaacccggtgaccaaggaaaagggacaaagatccgaccctctgcc
cctgccagggccagtggcctccgtaaaaagcctgcaggccctggaaagaaactccccacc
aacaatgagaacaaccctggcctccaggccacaatcagtggcctctggaaaaactttggt
tttaagaaagaaaatccaaagataaacccctgtaagaaaggagagcccatgtcaccagtg
aaggacaacgtgctagccctcacacctgaaacggacaaggatatttacttaatctccagt
gttcagaaaaccatatgcctctga
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