Oncorhynchus tshawytscha (Chinook salmon): 112252999
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Entry
112252999 CDS
T05605
Symbol
eef1a1a
Name
(RefSeq) elongation factor 1-alpha 1a
KO
K03231
elongation factor 1-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112252999 (eef1a1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252999 (eef1a1a)
03016 Transfer RNA biogenesis [BR:
otw03016
]
112252999 (eef1a1a)
03012 Translation factors [BR:
otw03012
]
112252999 (eef1a1a)
04131 Membrane trafficking [BR:
otw04131
]
112252999 (eef1a1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112252999 (eef1a1a)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112252999 (eef1a1a)
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112252999 (eef1a1a)
Translation factors [BR:
otw03012
]
Eukaryotic type
Elongation factors
112252999 (eef1a1a)
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
112252999 (eef1a1a)
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112252999 (eef1a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
112252999
NCBI-ProteinID:
XP_024280620
LinkDB
All DBs
Position
LG06:complement(69243974..69254862)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGINKMDSTEPNYSQKRYEEIVKEVSTYIKK
IGYNPDTVAFVPISGWNGDNMLEASPNMTWFKGWKITRKDGSSSGTTLLEALDAIQPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPVNVTTEVKSVEMHHEALT
EAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAAVFTAQVIILNHPGQISAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVDMVPGKPMCVESFSEYPP
LGRFAVRDMRQTVAVGVIKAVEKKAPSTGKVTKSAQKAQKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaagctccacatcaacattgtggtgatcggacacgtggactctggcaag
tccaccaccactggccacctgatctacaagtgcggtggcattgacaagaggaccatcgaa
aagtttgagaaggaggctgctgagatggggaagggctcctttaagtatgcctgggtgctg
gacaagctgaaggcagagagggagcgtggcatcaccattgacatctcactgtggaagttt
gagaccagcaagtactacgtcaccattatcgacgcccccggacacagggacttcatcaag
aacatgatcactggaacctcccaggcagactgtgccgtgctgattgtggcagccggtgtg
ggtgaattcgaggccggcatctcaaagaacgggcagacccgcgagcacgccctcctggcc
tacaccctgggggtcaagcagctgatcgtgggcatcaacaagatggattccactgagccc
aactacagccagaagcgttatgaggagattgtgaaggaagtcagcacctacatcaagaag
attggctacaacccggatacggtagcctttgttcccatctctggctggaacggagacaac
atgctggaggccagtcctaatatgacctggtttaagggatggaagatcaccaggaaggat
ggcagttcgtccgggaccaccctgctggaagctctggatgctattcagcccccgtcccgc
cccaccgacaagcccctccgcctacccctgcaggatgtctacaagattggaggtattggc
acagtgcctgtgggtcgtgtggagacgggcatgatcaagccaggcatggtggtgaccttt
gcccctgttaatgtgaccactgaggtgaagtctgttgagatgcaccacgaggccctgacc
gaagcaatgcccggtgacaacgtgggcttcaacgtcaagaatgtgtccgtcaaggacatt
cgccgtggcaatgtggccggagacagcaagaacgaccccccaatggaggcagcagtcttc
actgctcaggtgatcatcctgaaccacccaggtcagatcagtgctggctatgccccagtg
ctggactgccacactgcccacatcgcctgcaagtttgctgagctcaaggagaagattgac
cgtcgctcaggcaagaagctggaggacaacccaaaggctctgaagtctggagatgccgcc
attgtggacatggtcccgggaaagcccatgtgtgtggagagcttctcagagtaccctcca
ctgggtcgttttgcagtgcgtgacatgcgccagactgtggcagtcggggtaatcaaggct
gttgagaagaaagccccctccactggtaaggtcaccaagtctgcccaaaaggcccagaag
accaaatga
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