Oncorhynchus tshawytscha (Chinook salmon): 112253003
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Entry
112253003 CDS
T05605
Symbol
rin2a
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 2
KO
K23687
Ras and Rab interactor 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253003 (rin2a)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112253003 (rin2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RA
SH2
Motif
Other DBs
NCBI-GeneID:
112253003
NCBI-ProteinID:
XP_024280623
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All DBs
Position
LG06:complement(69290851..69350960)
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AA seq
1085 aa
AA seq
DB search
MSTSTLIQPSLREKKGSFFKLIDSFAWEIGTLKREVVQKAEPAERDPEPVILQGLDGEVG
GLYLQAPPCVGVGARLAGARDSGYDSLRRRMSVLDRLVQTHVVWLQLGLNHADSTSILEP
QPTGTFLVRKSTTLQRKVISLRMHQDSETPVKDFPVKESQYTFSLEGSGLGFADLFRLVA
FCCISRDVLPFTLKLPEAISAARTPTDLEEVAKLGAGFWDSEHCCRSKSSVSRLSGTTIQ
DQSFSPLVTRTPSQLECSQSNGALCFINPLFLKVHDPEGGNHTPPSSTSYYNNPHHLNNN
STTTTTATTVQGQQHCTSNPEQLIDCTNSPQPPSNSPQSPSPGNSPQHYNNSVSQAKSVS
RQPPPRPPPPHCAPRRPAPPRRQCSMPEKISWINPPKEKDRVGEREKGGEREKGSSLLSR
LGSSLSISPSSSFLLSSPPKKLSISAPISIPLSLSSPSRPKPTPPSDVDCHLALDDQTIE
NAISLSLAKLSLRNATTPDDNTEGNSPSTQDPAPSRREEGGRERGGRGDSVQRLSDMSLS
TESSADSLDFSQGFFPPLSEPSPPPPTTWSCPPSPTPTAAWRKMMMMKMKQTSAGLESDQ
DQDLTITPPGLRTKRRASAGAMVIQRALRGHLRKMSGVFNSLMTPEKRAIRRVLELSRDK
GSYFGCLVQDYLSFLQEGGGSQAWQCHASGLELLQTLRQFITQMKSYLRQSSELEPPIES
LIPEDQIDYVLEKAMHKIVLKPLKGVVGVALQEFQVRSGAWQELKENLSLAKVRQPQEMG
VTDALPPDPVAIEKIRHKFHTMCKLYSPEKKVTMLLRVCKLIYTIMEDNSGRLYGADDFL
PMLTYVLAQCDMPQLDNEILYMMELLDPSLLNGEGGYYLTSAYGAMSLIRNFQEEQAARV
LSSETRNTLHQWHRRRTTQRTAPSVDDFQNYLRVALQELDSGCTAKTLQVQPYATTEEVC
QICAYKFKVPDPEDYALFLLTEGSSQQLAPDTYPQKIKAELHSRPQAAPFHFVFRRVANL
NELDVTSFDPQSILNDVTLTTDSEPNHNDVALTPSDPQPNFNLGLSPSLSLSLPPNQQNG
NSISI
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaagcacactcatccaacccagcctcagggagaagaaaggcagcttcttcaag
ctgatcgactcatttgcctgggagatcggaactctgaagagggaggtggtgcagaaggct
gagccagcagagagggacccagagcctgtcatactacaggggctggatggggaagtggga
ggtctgtacctacaggctcctccctgtgttggtgtgggggcacggctggctggagctaga
gattcaggctacgactcgttgcgtagaaggatgagtgtgctggacaggctggtgcagacg
cacgttgtgtggctgcagctgggacttaaccatgcagactccacaagcatactggaaccg
cagcccaccgggacgtttctggtgaggaagtcgactaccctgcagaggaaggtgatttct
ctgcgtatgcatcaggactctgagacacccgtcaaagacttccctgtgaaggagagtcaa
tacacattctccttggagggatcgggcctcggcttcgcagacctgttccgtcttgtggcc
ttctgctgcatcagcagggacgtcttgccattcaccctaaagcttcctgaagccatctct
gcagccaggacaccaacagacttggaggaggtggccaagctaggagcaggcttctgggac
tctgagcattgctgcaggagcaagagttccgtctcccggttgtccgggacaaccatccag
gaccaatcattcagccccctggtcacccgcaccccgtcccagcttgagtgttcccagtcc
aacggggctctctgcttcatcaaccccctcttcctgaaggttcacgacccagaggggggc
aaccacacccctccctcctccaccagctactacaacaacccccaccacctaaacaacaat
agtactacaacaactacagcaacaacggtacaaggtcaacagcactgtaccagcaaccca
gagcaacttatcgactgcacaaacagccctcaaccccctagcaacagccctcagagtcct
agccctggcaacagcccccagcattataacaacagtgtgagccaggctaagagcgtgtcc
cgccaaccaccgcctcgccccccacctccccattgtgctccccgtcgccctgcccctcct
cgacgccagtgcagcatgcctgagaagatatcttggatcaacccccccaaagagaaggac
agggtgggagagagggagaaaggaggagaaagagagaagggcagtagccttctctcccgc
ctgggctcctctctcagcatcagtccatcctcttctttcctcttatcctcccctcctaag
aagctcagcatcagtgcccccatctctattcccttgtccctctcctccccaagtaggccg
aaacccacgccaccaagcgacgtcgactgccatcttgctctcgatgaccagactattgag
aacgccatttctctcagtctggctaagctgtcactgagaaacgccaccacccctgatgac
aacacagagggaaacagtccgtccactcaagacccagccccctcccgtcgagaggaagga
ggaagagaaagaggaggaagaggggacagtgtgcagcgcctgagcgacatgagcctttcc
accgaatcctctgccgactcactagacttttcccagggcttcttcccccctctctctgaa
cccagccccccaccaccaacaacctggtcctgccccccctcacccacccctacagcagca
tggaggaagatgatgatgatgaagatgaagcagacttcggcgggactggagagcgaccaa
gaccaggacctgactatcacccctcctgggctgcgcaccaaacggcgagccagcgccggg
gccatggtcatccagcgggccctcaggggccacctccgtaaaatgagtggggtgttcaac
tcgctgatgaccccagagaaacgggccatacggagagtcctggagctgtcgagggacaag
gggtcttacttcggctgcctggtgcaggactacctgagcttcctgcaggagggaggcggc
agccaggcctggcagtgccacgcatcaggactggagttgctgcagacgctacgccagttc
atcacccagatgaagagctacctgcggcagagctctgagctggagccccccatcgagtca
ctcatcccagaggaccagatcgactatgtcctagagaaggccatgcataagattgtcctg
aagcccctaaaaggtgtggtgggagtggccctccaggagttccaggtccgcagcggggca
tggcaggagcttaaggagaacctttcattggccaaggtccggcagccccaggaaatgggc
gtgaccgacgcactccctccagatccagtcgccatagagaagatccggcacaagtttcac
accatgtgtaaactctactcccctgagaagaaggtgaccatgctgctgcgcgtgtgtaaa
ctcatctataccatcatggaggacaactcaggtcgtctgtacggggcagatgacttcctg
cccatgctgacctatgtgttggcccagtgtgacatgcctcaactagataacgagatcctc
tacatgatggaactgctggacccctctctgctcaatggagaaggtggatactacctgacc
agtgcgtacggagccatgtccctcattaggaacttccaagaggagcaagcagctcgtgta
ctcagttctgaaacacgcaacacactccaccagtggcaccgtcgccgcaccacccagcgc
actgctccctctgtagacgactttcagaactacctgcgagtggcgctccaggagctggac
agcggctgcacggccaaaaccctgcaggtgcagccctacgccaccacagaggaagtctgc
cagatctgtgcctacaaattcaaagttcccgaccctgaggattacgctctgttcctgctc
actgagggctcgagccagcagctagcccctgacacatacccccagaagatcaaagcagag
ctccacagtcgaccccaggccgcaccttttcacttcgtcttccgtcgcgtggctaacctc
aatgaactggacgtgacctcttttgacccccagtccatcctcaatgacgtcacccttacc
acagactctgagcccaatcacaatgatgtagccttaaccccttcggacccccagcccaac
ttcaacctgggtctcagtcccagtctcagcctcagtctaccccccaaccagcaaaatggc
aactccatatctatctga
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