Oncorhynchus tshawytscha (Chinook salmon): 112253041
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Entry
112253041 CDS
T05605
Symbol
smap1
Name
(RefSeq) stromal membrane-associated protein 1 isoform X1
KO
K12486
stromal membrane-associated protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112253041 (smap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253041 (smap1)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112253041 (smap1)
Endosome - Golgi transport
Arf GTPase associated proteins
112253041 (smap1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
112253041
NCBI-ProteinID:
XP_042179518
UniProt:
A0AAZ3REN9
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Position
LG06:complement(70644058..70710514)
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AA seq
473 aa
AA seq
DB search
MSTRSEREKAQKLNEQHQAILSKMLREDDNKHCADCEAKGPRWASWNLGVFMCIRCAGIH
RNLGVHISRVKSVNLDQWTQEQIQSMVDMGNNKAKQLYEAHLPDTFRRPQTDQAVEFFIR
DKYERKKYYDQNGLKTASKSSDATAFSTSPASQAAEKNRQEKEREKKKREKDLEKVNRPS
SSEKKKAELQTDSRANPRRTPEPAIDLLGLDAPAGGAATSSAAPVSDEDIFGPMVSNPLP
SSNNTQAVSSAAPGAPAVAASAGGSGGAAGPQANLDLFSEKNSSSTKTEEGAKKPLSKDS
ILSLYSNTTVSPQPAAPAAAMYMGQPPMQQFPSQPSGQPNFQTYPGVGGAMPPTTMTGGV
MPQGGGAMMGQNSGMMVGMAMPNGGYMGMQQGMMGPPGGAMPAGAGTPQMYAAMQQQQQQ
QGQWNVSQMTQQISGIAMSDGVAAPPGFVQPGAPMGGGVGPPSGQTLSTQLWK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgcggtcggagagagagaaagcccagaaactgaatgagcagcatcaggccatt
ctgtccaaaatgctccgagaggacgacaacaagcactgcgctgactgcgaggctaaagga
ccgcgatgggcgtcgtggaacctgggggtcttcatgtgtatccgctgtgctggcatccac
aggaacctgggcgtccacatctccagagtcaaatctgtcaacctggaccaatggacccaa
gaacaaatccagagtatggtagacatggggaacaacaaggccaaacagctgtacgaagcc
cacctcccagacaccttcagacgtccacagaccgaccaagcagtagagttcttcatccgg
gataagtacgaaaggaagaaatactacgaccagaatggcctcaaaacagcttcaaagtct
tctgatgccactgccttctctacctctcccgcctcacaggctgctgagaagaacagacag
gagaaggaacgagagaagaagaagagggaaaaggacctggagaaagtgaacagaccaagc
tcctctgagaagaagaaggcggagcttcagacagactccagagccaatcccaggaggacc
cccgagccggccatcgacctgctcggcctggatgcacctgcaggtggagctgcaaccagt
tctgctgcaccagtcagtgatgaggacatctttggtccaatggtgtccaaccctctgccc
tcctccaacaatactcaggcagtctccagtgcagccccaggcgccccagcagtagcggcg
tccgcggggggatcggggggcgctgctggcccccaggctaatctggacctcttcagtgag
aagaacagtagcagcaccaagacagaggagggggccaagaaacccctctccaaggactcc
atcctctccctctacagcaacaccacagtcagcccacagcctgctgccccagctgctgct
atgtatatgggccagcctccgatgcagcagttccccagccagccctccggacagcctaac
ttccagacttacccaggagtgggcggagctatgccacccacaaccatgacgggcggtgtt
atgccccagggaggaggagccatgatggggcagaactctggcatgatggtcggtatggcg
atgcccaacggcggttacatgggtatgcagcaaggcatgatggggcctccgggcggagct
atgccagcgggggcggggactccccagatgtacgccgccatgcagcagcagcaacaacag
cagggccagtggaatgtgagccagatgacccagcagatatcgggcatcgccatgagtgat
ggtgtggcagcgccacccggctttgttcaaccaggtgctcccatgggtgggggggtgggt
cctccctcgggccagaccctcagtacccagctgtggaagtga
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