Oncorhynchus tshawytscha (Chinook salmon): 112253090
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Entry
112253090 CDS
T05605
Name
(RefSeq) alpha-actinin-2 isoform X1
KO
K21073
actinin alpha 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112253090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253090
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112253090
04147 Exosome [BR:
otw04147
]
112253090
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112253090
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112253090
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112253090
Exosomal proteins of colorectal cancer cells
112253090
Exosomal proteins of bladder cancer cells
112253090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_7
EF-hand_1
EF-hand_6
CAMSAP_CH
AIF-1
EF-hand_8
EF-hand_11
XisI
Motif
Other DBs
NCBI-GeneID:
112253090
NCBI-ProteinID:
XP_024280768
LinkDB
All DBs
Position
LG06:75338285..75359208
Genome browser
AA seq
896 aa
AA seq
DB search
MMTQIETTVHYNNGFGDEEDYMIQEDEWDRDMLLDPAWEKQQRKTFTAWCNSHLRKAGTQ
IENIEDDFRNGLKLMLLLEVISGERLPKPDRGKMRFHKIANVNKALDFITSKGVKLVSIG
AEEIVDGNIKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYRNVNVQNFHV
SWKDGLAFCALIHRHRPDLIDYAKLNKDDPMGNLNLAFEIAEKHLDIPKMLDAEDIINTP
KPDERAIMTYVSCFYHAFAGAEQAETAANRICKVLGVNQENEKLMEEYERLASELLEWIR
RTTPWLENRTAEKNMVEMQRKLEDFRDYRRMHKPPKVQEKCQLEISFNTLQTKLRISNRP
AFMPSEGKMVSDIASAWQGLEGAEKGYEEWLLTEIRRLERLDHLAEKFRQKASTHETWAN
GKELILSQKDYETATLTEVRALLRKHESFESDLAAHQDRVEQIAAIAQELNELDYYDVAA
VNQRCQRICDLWDQLGTLTQKRREALERTEKLLETIDQLFLEFAKRSAPFNNWMEGAMED
LQDMFIVHTIDEVQSLISSHEQFKATLPEADGERQAILGIHMEVQKISQSYGIKANLINP
YSTITTEELLAKWDRVKKLVPQREGSLQEELARQHASERLRRQFAVQANLIGPWIQTRME
EIGHCSLEVGGTLEDQMTQLKQFEHVIVTYKPNIDKLEGDHQLIQESLVFDNKHTNYTME
HIRVGWELLLTTIARTINEIETQILTRDAKGISQEQMHEFRSSFNHFDRKKHGAMDTDDF
RACLISMGYDLGEVEFARIMMLVDPSATGMVSFQSFIDFMTRETTDTDTADQVVASFRIL
AANKPYILVEELRRELPPDQAEYCILRMAPYSGPGGPVGALDYTAFSTALYGESDL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccaaatagagacgacagtgcattataataacggattcggggatgaggaggac
tacatgatacaggaggatgagtgggacagggacatgttgctggaccctgcctgggaaaaa
cagcaaagaaagaccttcacagcctggtgtaactcccacctgaggaaagcaggaacacag
attgagaacattgaggacgactttaggaatggcctcaaactcatgcttctcttggaagtt
atttcaggtgagaggttacccaagcctgacagagggaagatgcgttttcacaagattgcc
aacgtcaacaaagccttagatttcatcaccagcaaaggagtgaaacttgtctctattgga
gctgaagaaattgtggatggtaacattaagatgacactgggaatgatatggaccatcatc
ctccgctttgccatccaggacatctctgtagaagaaacctctgcaaaggaaggccttctc
ttgtggtgccagagaaagactgccccctacaggaatgtcaatgtccagaactttcatgtt
agctggaaggacggactggccttctgtgccctgattcacagacacaggcctgacctcatc
gactacgctaagctcaacaaggatgatcccatggggaacctgaacctggcgtttgaaata
gcagagaagcacctggatattcccaagatgctggacgcagaagacatcatcaacaccccc
aagcctgatgagagagctatcatgacctatgtgtcctgcttctatcatgcatttgctgga
gccgagcaggctgaaacggcagccaacaggatttgtaaagtgctgggtgtgaaccaggag
aatgagaaactgatggaggaatacgagaggttggccagcgagctactggagtggatccgc
cggaccaccccatggttggagaacaggactgcagagaagaacatggttgagatgcagaga
aagctggaagatttcagagactaccgccgcatgcacaagccccccaaggtgcaggagaag
tgccagctggagatcagcttcaacaccctgcagaccaagctgcgcatcagcaaccgtccc
gctttcatgccctcggagggaaagatggtgtctgacatagccagtgcatggcaggggctg
gagggggcagagaaaggctacgaggagtggcttctgacagagatccgaagacttgagaga
ctggaccacctggctgaaaagttccgccagaaagccagtacccatgagacctgggctaat
ggtaaagagctgattctatctcagaaggactacgagacggccaccctgacggaggtgcgg
gcgttgctacggaaacacgagtcgtttgagagtgacctggctgctcatcaggacagggtg
gagcagatcgctgccatcgcacaggagctcaatgagctggactattatgatgtggctgct
gtcaaccagaggtgccagagaatctgtgacctgtgggatcaacttggtacactgacccag
aagaggagagaggctctggagaggacagagaagttgctggaaaccattgatcagttgttc
ctggagtttgccaagagatcagcacccttcaacaactggatggaaggggccatggaggat
ctgcaggacatgtttattgtacacactatcgatgaggtccagagcctgatctcttcccat
gagcagttcaaggccaccctcccagaggcagacggagagagacaggccatcctggggatc
cacatggaggtgcagaagatctcccagagctacggcatcaaggccaacctcatcaacccc
tacagcaccatcaccaccgaggaactcctcgccaagtgggacagggtgaagaagctggtt
ccccagagagaaggctccctccaggaagagctagcccggcagcatgctagcgagaggctg
agacggcagtttgctgtccaggctaacctcatcggaccatggatacagacaaggatggag
gagatcggccactgctccctggaggtgggtggtaccctggaggaccagatgacccagctg
aagcagtttgagcacgtcatcgtcacctacaagcccaacatcgacaagctggagggagac
caccagctcatccaggagtctctggtgtttgacaacaagcacaccaactacactatggag
cacatccgtgtgggctgggagctcctcctcaccaccatcgcccgcaccatcaacgagatc
gagacccagatcctgacccgtgatgccaagggcatcagtcaggaacagatgcacgagttc
cgctcttccttcaaccactttgatcggaagaaacacggggcgatggacactgatgacttt
agggcctgtctgatctccatgggttatgatttgggtgaagtggaatttgcccgcatcatg
atgctggtagatcccagtgccactggcatggtgtctttccaatcctttatcgattttatg
accagagaaaccactgacacagacaccgccgaccaggtcgtggcatccttcagaatcctg
gcagccaataagccctacatcctggttgaggagctgaggagggagctcccccctgaccag
gcagagtactgcatcttgaggatggccccctacagtggtccagggggacccgtgggggct
ctagactacaccgccttctccactgccctctacggagagagtgacctctaa
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