Oncorhynchus tshawytscha (Chinook salmon): 112253105
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Entry
112253105 CDS
T05605
Name
(RefSeq) AT-rich interactive domain-containing protein 5B-like
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112253105
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
ARID
112253105
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
112253105
NCBI-ProteinID:
XP_024280805
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All DBs
Position
LG06:76224341..76289257
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AA seq
1175 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFKFHRDGKPRILSLGDFFFVRCKPGDPICIAELQLL
WEERTTKQLLSSSKLYFSPEDTLLGRTVSHGEHEVIAVSEKVIVRLEDLVKWTVPEFSGW
SHGLRAAPLKPSVLRELGANGRRDALHRYRESTFTSGLNFRDIQRERAQLGQEDDGRKVL
VLSYPQYCRYRSVLARLREQPSALLTNHTVLALGGIASLHSTTRILYCRDTFEHPTLLQN
ESVCDEFAPNLKGRPRKKKLSVSQRRDSQGHSQGPQGPQEPSTLENKSPTKVKPNCKITV
PTSRGTTTKPRICKKASVEEKVEREEKMEREEKVEREEKVEREEKVEKVEREEKVEREEK
VEEEKEEPEENQSEESGADEQAFLVALYKYMKERDTPIERIPFLGFKQINLWTMFQAAQK
LGGYELITVRRQWKNVYDELGGNPGSTSAATCTRRHYERLLLPYERHTKGEEDKPLPSAK
PKKQEHGAQEGGAKHKGVTAKRPKGGLHQRQGARKKRERGDTAKSQELSQVSEKKGDNQE
PAAMKQDPLPREEPEEEELQLTLKKEETVSEEEPSRLNPPNTDCHRATPVLHSELSPLSE
WRHPQQPQSDKLNPEQRDQADGTLSKTPYPYHWDNNSKPGYSSLPDPSNPDIPVTKDTDS
LSYGHGGRVGKVLPMCKQSPPPLQQYSTELITDKQDSPSKNKEINQCHMPMPTAYSKDNL
GVMSPLAKKKLLSQVCETNHYSFSSPPLPLPPPTPSASVGDVSDSCVEEGVKLRQDSLPD
SPEMAPVFRPSVIQHAQSIKPHQERSPLGDLSEPFTCRVSHFQPQLHPPWHPYLHRTETQ
DGEENAGETRMQQQPSQAPPGYAGDCYSSPHLHNLYRQTENCLSQERMDSYPNRDKHGHF
IRERQNSEVFTSNNSDREYLTYRAPHFSERTQTHGDRPMEEEPQDFSISKPVSQRMSFTK
PSFCGLPYPMMHQSLDCHPKACRVPPMTISSTKHLEPLQPFFNPKSHAEAVGASRPSKRS
LGELENEGVPDRKVRVVTPMHPAGSVRRGDPQGEELKPAEPAHAVHFHLHSHIPEGHTYP
PHAPFYPGMYPGMQDALHHNLQYLKSQTAVSPLVPPLAFHSMMLQRQLMASQPSPHHFYR
HPGGAALYGDLLHHLYPLSTLTHPQLSSMHPSTRL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggagcctaactcactcaagtgggtaggctcgtcttgcggtttacacggaccatatata
ttctacaaggcttttaaatttcaccgggacggtaaaccaaggattctgtccctcggagac
tttttcttcgtaagatgtaaacccggggatccaatttgcatagcggagctacagctgttg
tgggaggaaagaactactaagcaacttttatcaagctcaaaactttatttctcacccgaa
gatactctcttgggaaggacagttagtcatggagagcacgaggtcattgctgtgtcagag
aaggtgattgttcggttggaagacctggtgaagtggacagtcccagagttttcgggatgg
tcccacggactgcgggcagcgcctctgaagccctctgtcctgagggagctgggtgccaat
gggcgcagagatgccctccacagatacagggagagcaccttcaccagcggcctcaacttc
agagacatccaaagggagagggctcaattgggccaggaagatgacggcaggaaggttctg
gtgctgagctatccccagtactgccgttaccgctctgtcctggcccggctcagagagcag
ccgtcggccctgctgacgaaccacaccgtgctggctctgggcggcatcgcctccctacac
agcacaacacgcatcctctactgcagggacaccttcgaacaccccaccctgctgcagaac
gagagtgtctgcgacgagttcgcccctaacctgaagggtcggccacggaagaagaagctg
tcagtgtcccagcgaagggattcccagggccacagtcaggggcctcaggggccccaagaa
cccagcaccctagagaacaagtctcccaccaaggtaaaacctaactgcaagataacagtt
cctaccagcaggggcacaacgaccaaacccaggatctgtaaaaaggcatctgtggaggag
aaggtggagagggaggagaagatggagagggaggagaaggtggagagggaggagaaggtg
gagagggaggagaaggtggagaaggtggagagggaggagaaggtggagagggaggagaag
gtggaggaggagaaagaagaaccagaagagaaccaatcagaagagagtggtgcagacgag
caggccttcctagtagccctatacaagtacatgaaagagagggacacacctattgagagg
atccccttcctgggatttaagcagataaacctttggactatgtttcaagctgctcagaaa
ctcggaggatatgagttgatcacagttcgccgacagtggaaaaatgtatatgatgagctg
ggtggtaacccaggaagcacaagtgccgccacatgcacacgaagacactacgagaggctc
ctcctaccttatgagaggcacaccaaaggagaggaagacaaacccctcccctcagcaaaa
cccaaaaaacaggagcatggagcccaagaggggggtgccaaacacaaaggggtcacagcg
aaacgacctaaaggtggactacaccagaggcagggggccaggaagaagagggagagaggg
gacactgcaaaaagccaggagctctcacaggtatctgagaagaaaggggacaaccaggag
ccagcagccatgaagcaggatcctctgcccagagaagagcctgaagaggaggagttacaa
ctcaccctgaagaaagaggagacagtgagcgaggaggaaccttcgcgactgaatcccccc
aacacagactgccacagagctacacctgtcctccacagtgaactgtctccactgtctgag
tggagacatccccaacagccacagtcagacaaactcaaccctgagcaaagggaccaagct
gatggaaccctgtctaagaccccatatccataccactgggacaacaacagtaagcctggg
tatagcagtctacctgacccaagcaatcctgacattccggtaactaaagacacagacagt
ctcagttatggacatggtgggagggtgggaaaggtgctgcccatgtgtaagcagagccca
cccccactgcagcagtactccacagagctaatcacagacaaacaggactcccccagtaaa
aacaaagagattaatcagtgtcacatgcccatgccaacagcgtactcaaaggacaacctg
ggggtcatgtccccactagccaagaagaaactcctctcccaagtctgtgagacaaatcat
tactcattcagttctcctcctcttcctctccctcctcccactccgtcagccagcgtgggt
gatgtgagcgacagttgtgttgaagagggggtgaaactgaggcaggactccctgccggat
agcccagagatggctcctgtcttcaggccttctgtcatccagcacgcccagagcatcaaa
ccccatcaagagaggagtcctctgggggatttgtctgagcctttcacttgcagagtgagc
cacttccagccccagctccaccccccctggcacccctacctccacaggactgagacccag
gatggagaggagaacgcaggggagacacggatgcagcagcagcccagtcaggcaccacca
ggctacgcaggtgactgctactcctcccctcacttacacaacctctaccggcagacagag
aactgtctgagtcaagagcgaatggacagttatcccaacagagacaaacatggacatttt
atcagggaacgccagaacagcgaggtattcacctcaaacaattctgacagagaatatttg
acttacagagctccccacttctctgagaggacacaaacacatggggatagaccaatggaa
gaggaacctcaagatttcagtatttccaagcctgtctctcaaaggatgtctttcacaaag
ccctctttctgtggcctcccgtatcccatgatgcaccagagtttagactgtcaccccaaa
gcgtgcagagtccctccgatgactatatctagcaccaaacacctggaaccccttcagccc
ttcttcaaccctaaaagccacgctgaggcagttggtgcctctagacccagtaagagaagc
ctgggggaactagagaatgagggggtgccagaccgcaaggtgcgagtggtgacccccatg
caccccgccggctctgtccgccgaggcgacccacagggagaggagctcaaaccagccgaa
ccggcgcacgccgtccacttccacctccacagccacattcctgagggccacacctaccct
ccccacgcgcccttctacccagggatgtaccccgggatgcaggacgccctccatcacaac
ctccagtacctgaagagccagacagccgtgtcccctctggtccctccgctagccttccac
tccatgatgctacagaggcagttgatggcctcccagcccagcccccaccacttctacagg
caccctgggggggcggccctgtacggggacctcctgcaccacctgtaccccctgtccacc
ctcacccacccacagctgtcctccatgcaccccagcaccagactctaa
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