Oncorhynchus tshawytscha (Chinook salmon): 112253114
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Entry
112253114 CDS
T05605
Symbol
tbc1d12a
Name
(RefSeq) TBC1 domain family member 12
KO
K20167
TBC1 domain family member 14
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253114 (tbc1d12a)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112253114 (tbc1d12a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
DUF4355
Motif
Other DBs
NCBI-GeneID:
112253114
NCBI-ProteinID:
XP_024280815
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All DBs
Position
LG06:complement(76450915..76468125)
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AA seq
940 aa
AA seq
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METAEHGDVVLVLPVDVNENEEAGKSYGSHADCNIIATSRPLIDNGSRVCAADEGQTGKG
YVYIASNGKSPIVECVVLPSQNVRVGNTIMRDLVADCLPIQMHESCVISNLCNDPPHPND
HRFNGFTESSVQLMVGSETDGGGNGGPFSCSDTAASAYRHEEGNGMLLQLARVSQRGKLD
YEGETQDSNSGTLNEGDSNMEPGPQPPSLSPLSCRPIDNRQQNDTFTDSVDVDMKMANGD
MDCYLSNDDWSTDVDTDYCSQMDTCNRLLCQGLDCSVMEVNGGLHTVNTEATCDLDAVSS
ERTTNVPFDVVVVHASNLQLQNIQSSPALCERNSGGLRHGSPVGAPPAAAKPPDAASSVP
DSEGVPSESSAKRPSPSLSTLSENTNSPNTEPSMREDLRECSLPARPLSLRTNPNITVSL
SCDATPLSPEDGDMLFGDEGGADCSRNTYDVGRRQSAPEKLPDGSTVLSSSKKFGISDFF
TRNLFSRKPKEPKPPSQNIPGWRLFGKVPLRENTTKDPKDSFTIQQEYPVKVGPAPGPQV
QLSAARRKNLEFEPLSTTALILEDRPSNLPAKSVEEAMRHKQEYDEMVAGAKRRELKEAQ
KKKRQMKERFKQEDSIANAMVIWNNDVLPNWDCMRNTRRVRELWWQGLPPSVRGRVWSLA
IGNELNITPELFEIFLSRAKERWKSFSETSSENETEDSGSLQADRESSLDLIKLDISRTF
PSLFIFQKGGPYHDLLHSVLGAYTCYRPDVGYVQGMSFIAAVLILNLEEADAFIAFANLL
NKPCQMAFFRVDHDLMLKYFAAFEVFFEENLPRLFNHFQINNLTPDLYLIDWIFTLYSKS
LPLDVACRVWDVFCRDGEECLFRTGLGILRLYQEVLLQMDFIHMAQFLTRLPDDMAADNL
FSCITATQMLSSNRKWGQVFSALMKDGSKEIANHSPAPRS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagcagaacatggagatgtggttcttgttttgcccgtcgatgtcaacgaaaat
gaagaggcaggtaaatcttacggttcacatgccgactgtaatataatagcaacctctcgc
ccattgatcgacaacggaagccgagtatgcgcggcggatgagggtcaaacggggaaaggt
tatgtttatatagccagcaatgggaagagtccaatcgttgaatgtgtcgtgttaccatcg
cagaacgtccgagttgggaatacaataatgcgggatttggttgcagactgtctccccatt
cagatgcatgaaagctgtgtaatttcaaacctgtgcaacgacccaccgcacccgaacgac
cacagatttaatggatttactgagtcatcggttcagctaatggtcgggtcggaaactgac
ggaggggggaacggggggcccttttcctgctcagacacagccgcaagcgcctacagacac
gaggaggggaacggaatgttactgcagctggctcgtgtttcacagcggggaaaactggat
tatgagggggagactcaagattccaactcgggtacactgaacgaaggggattctaatatg
gagccagggccacagccgccatctctctctccattgtcatgtaggcctatagacaaccgt
caacagaatgacactttcacagactctgttgatgtggacatgaagatggccaatggggat
atggattgttatttatcaaatgatgattggtctacagatgtggatactgattattgtagc
cagatggacacatgcaaccgactgctatgccaaggacttgactgctctgtcatggaagta
aatggtggcctgcatactgtaaacactgaagctacatgtgatttggatgctgtttcctca
gaaagaaccacaaatgttccatttgacgtcgtcgtggtgcatgcttctaatctgcagctc
caaaacatccagtcatcacctgcattatgtgagagaaacagcggggggttgaggcatggc
agcccagtgggagctcccccggcagctgccaagccccccgatgcagcgagtagtgttccg
gactctgagggtgtcccttcagaatcgagtgccaaacgcccgtctccctctctgtcaaca
ctttctgaaaacaccaacagtccaaacacagaacccagcatgagagaggatttgagagag
tgcagtctcccagctaggcctctcagcctcaggactaacccaaacatcacagtctctctc
agctgtgatgccacccctctcagcccggaggatggggacatgttatttggagatgagggg
ggtgcggactgctctagaaacacttatgatgtcggtcgtcgtcaaagtgctccagagaaa
ctccccgacgggtcgacagttctgtcctcttctaagaagtttggaatctcagattttttc
accagaaacctgttttctaggaagcccaaagagccaaagccaccttctcagaatattcct
gggtggaggttgtttggaaaggtccccctgagggagaacactactaaagatcctaaagac
tccttcaccatccagcaggagtacccggtgaaggttggaccagctccaggtccccaggtc
cagctctctgcagcgcggcggaaaaacctggagtttgagccgttgtctaccacagctctg
atactagaggacaggccatcgaaccttcctgccaagtctgttgaggaggccatgcgtcac
aaacaagagtatgacgagatggtggcaggagccaagaggagagagctgaaggaggcccag
aagaagaagcgtcagatgaaggagaggtttaaacaggaggacagcatcgccaacgccatg
gtcatctggaacaatgacgtcctgcccaactgggactgcatgcgtaacacgcgtcgggtc
agagagctctggtggcagggccttcctcccagcgtccgaggacgagtctggagcctggcc
atcggcaacgagctcaacatcacccccgagttgtttgagatatttctgtctcgggctaag
gagaggtggaagagcttcagtgagaccagctctgaaaatgagaccgaagactctggatca
ttgcaggcggatagagagtcaagtctggacctgataaagctggacatctccaggaccttc
ccctctctctttatttttcagaagggtgggccctatcatgacctcttgcacagtgttctg
ggggcgtacacgtgttatagaccagacgtgggctatgtccaggggatgtccttcatcgct
gcagtgctaatcctgaatctggaggaagctgacgccttcatcgccttcgccaacctgctc
aacaagccctgtcagatggccttcttcagagtggaccacgacctgatgttgaaatacttc
gctgctttcgaggtgttctttgaagagaacctcccacggctgttcaatcactttcagatc
aacaacctcacccctgacctttatctcatagactggatcttcaccctgtacagtaagtcg
ttgccattggatgtggcgtgtcgcgtgtgggacgtgttctgtcgggacggggaggagtgt
ctgttccggacaggcctgggcatcctgcgcctctaccaggaggtcctactgcagatggac
ttcatccatatggctcagttccttacccgcctgcctgatgacatggccgctgacaacctg
ttcagctgcatcactgccacacagatgctcagcagcaaccgcaagtggggtcaggtcttc
tctgcattgatgaaggatggcagtaaggaaatagccaaccacagtccggctccaagaagc
taa
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