Oncorhynchus tshawytscha (Chinook salmon): 112253131
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Entry
112253131 CDS
T05605
Name
(RefSeq) reticulon-1 isoform X1
KO
K20720
reticulon-4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253131
03036 Chromosome and associated proteins [BR:
otw03036
]
112253131
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112253131
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112253131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
112253131
NCBI-ProteinID:
XP_024280853
LinkDB
All DBs
Position
LG06:78216579..78241408
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AA seq
980 aa
AA seq
DB search
MEDSEQVVSSTTPSEDEMRSYRQFENHYGNEATAKVGKDDIVDLVGGAQDAIERHMASYP
DDSKEFTEEAKEQLTNEVISDITPSDEEQEEEATDTFSEAEPVILNPLDADYLPELIRPD
PPKAAQEKEPAPVVESAPVAEVLPEAAPEKEAIAAPPAPSRVLQRWNIDKRDEHFLPSTP
LQPLMQFPKELGQKGDSPAPISPLSPLHSPDSLEDLSLSESPNPTSAPLGFSSWPSTEPP
KIQTKDMPCDEEGNTRLGFIKNDEDIVKGLEAASYAQSKHDQNICLERDGRPKSLCEDSG
VVSPEEQICSSVRSATPSRSPQNPPMTPESYIAPASSTPVEHWDSPSQVSQDNTRASMDM
FSKDSASRGSSGYVPDMLGQPDDDLMFEVKKNPFQGFSPVADAGFSHFGDTTSDSMAAKI
SESPTPDLVQYGQAEDSQDGSPPSYYDETKTYVSVKMAADSLMEPLNQFSTTPKESEDSA
PPSLPDILKPFPLNPDKVDSGSSEGSTEPSPAPVRKIVESPTVPVPLSATNPFAFDSKAL
LLKELTEETEARLAVKTEDKGFSAFDLVKEAGTTPQSKEPVQIEQKDWMFSSQDSPKIVN
KLEPLNIQTRKTPEDSDSESPSADSLSPVLEAMAKNPASFQVETEKDDMKVEEPEAVEEN
SEPEVSSEEFEFIERPTRGVMDEFLEAFDGAKFAKAPELSMDDDDDDDDMSFGLKDVTSA
NVAPEVQEEVPSQSSYLLLTQEGKAYLEKDDLNEPASQAPLIHSPVREPEMVAKDTEGPK
TAQMPNLSTEAVVELLYWRDVKTSGVVFGASLSLLLSLTLCSIVSVSSYIGLALLSVTIC
FRIYKGILQAIQKSDEGHPFKLYLDQDVALSEGTVHKYSDCVLARFNTTVTELRRLFLVE
DLVDSLKFAVLMWILTYVGALFNGLTLFILGLVGMFSCPIVYEKYKVQIDHYVGMASKQV
KDIIATVQSKVPGLTRVKAE
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagtgaacaagtagtatcgtccacaactccgtccgaagacgaaatgagaagc
tacagacaattcgagaatcattatggcaacgaggccacagctaaagttggcaaagatgat
attgtagacttagttggtggagcacaggatgctattgagaggcacatggcttcttacccc
gatgattcaaaagaatttacggaggaagcaaaggaacaactgacaaacgaggtgatttca
gatataactccatcagatgaagaacaggaggaagaggcgactgacacattttcagaagct
gaaccagtgattctcaatcctttggatgcagactatttgccagaactcataaggccagat
cccccaaaagcagctcaagaaaaagaaccagccccagtagtagaatctgctccagtagca
gaagtgctccccgaagcggctccagagaaagaagcgattgcggctcctccagcaccatcc
cgtgtacttcaacgttggaacatagacaagagagatgaacattttcttccttctactccg
cttcaacctctgatgcaattcccaaaagaacttgggcagaagggtgattcccctgctccc
atctcccccctctctcctcttcactctcctgactctctggaggacctctccttgtcagag
agtccaaatccaacgtctgctccattgggcttctcttcttggccttctactgagcctccc
aaaatacagaccaaggatatgccttgtgatgaagagggtaacaccagattaggctttatt
aagaacgatgaggatatcgtgaaagggttagaagctgcttcctacgctcaaagtaaacat
gatcaaaacatttgcttggagagagatggaaggcccaagtctctgtgtgaagacagtggg
gttgtctctcctgaagagcagatttgtagctcagtcaggtctgctacaccttcccggtcc
ccccaaaatcccccaatgacccctgaatcttacattgcacctgcctcctctaccccagta
gagcactgggattctccatcccaagtttctcaagacaacaccagggcctccatggatatg
ttctccaaggactcagcctccagaggctcctctgggtatgtgccagatatgcttggccaa
ccagatgatgacttaatgtttgaggtgaagaagaatccattccaaggcttctcccctgta
gcagatgctgggttctcccattttggggataccacttctgacagcatggcagctaaaata
tctgagagtcccaccccagacctggtccaatatggccaggctgaagactcccaagatggc
agcccaccatcatattatgatgagacaaaaacgtacgtgtctgtcaagatggctgcggac
tctctcatggagccactcaatcagttctcaaccaccccaaaagagagtgaagactctgca
cctccatctctcccagatatcttaaagcccttccctctgaaccctgacaaagtggactct
ggctcttctgaaggaagcactgagccgagccctgctcctgtccggaagatagttgagtca
cccactgtccctgtccctctgtcagccacaaatccctttgctttcgattccaaagcttta
ctgctaaaggagctgactgaggagactgaagcaagattagcagtgaagactgaagataaa
ggctttagtgcctttgaccttgtaaaggaggcagggaccacaccccagagcaaagaacct
gtccagatagaacaaaaagattggatgttttccagtcaagattcacccaaaatagtgaac
aaattagagcctcttaatatccagactagaaagacccctgaagattctgattccgagagt
ccgtccgcagactctctgtcccctgttctggaggcaatggccaagaatcctgcaagtttc
caggtggagactgagaaggatgacatgaaagtggaagagccagaggcagtagaggagaac
tctgagcctgaagtctcctcggaagagttcgagttcatcgaaaggcccaccaggggtgtg
atggatgagtttctagaagcatttgatggtgccaagtttgccaaggcaccagagctaagt
atggatgacgatgatgatgatgatgacatgagctttgggctgaaggatgtgacgtctgca
aatgtagccccagaagttcaggaggaagttcccagtcagagctcttacctcctacttacc
caggagggtaaggcctacctggagaaggatgatctcaacgagcctgcgtctcaggcccct
ctcatccactcaccagttcgcgaaccagagatggtcgctaaggacacagagggccccaaa
actgctcagatgcccaacctgagcacagaagcagtggtagagctcctgtactggcgtgat
gtcaagacttcgggcgtggtgtttggcgctagcctctccctgctgctctccctgacactg
tgcagcatcgtcagtgtctcctcctacatcggtctggctctcctctctgtcaccatctgc
ttcaggatatacaaggggatcctgcaggccatccagaagtccgacgaagggcacccattc
aagctgtacctggatcaggatgtggctctgtcagagggaactgtccataagtacagcgac
tgcgttctggcacggttcaacacaacagtcactgagctgcgtcgcctcttcctggttgaa
gacctggtggattccctaaagtttgctgtgctgatgtggattctcacctatgttggtgcc
ttgttcaacggactcactctctttattctgggtctggttggaatgtttagctgccctatt
gtctatgagaagtacaaggtacagattgaccattacgtgggtatggccagcaagcaggtt
aaagacattattgcaacggtgcagtccaaagtcccaggactgacgcgtgtgaaggcagag
taa
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