Oncorhynchus tshawytscha (Chinook salmon): 112253140
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Entry
112253140 CDS
T05605
Name
(RefSeq) tetratricopeptide repeat protein 7A-like isoform X1
KO
K21843
tetratricopeptide repeat protein 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253140
Membrane trafficking [BR:
otw04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
112253140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_14
TPR_2
TPR_1
TPR_9
TPR_16
TPR_6
Iml2-TPR_39
TPR_12
TPR_20
Motif
Other DBs
NCBI-GeneID:
112253140
NCBI-ProteinID:
XP_042179036
LinkDB
All DBs
Position
LG01:53701927..53753805
Genome browser
AA seq
929 aa
AA seq
DB search
MSTFHRENEAAKFIFRRFESAVTPRVSGEYGHRDRSGSRAGMATSRVSFSQYRLEAEIDR
YRAECQWDKIPPIVEQLVAARFHEDDDYGTLLLAEALLEECLQDNLSLLRNATPLTDINQ
PKLSRSKGYLNSILSRGRLVPRHLNEALLLMAKIHYVQGCYHDAQGMCARVGIDELTGDE
QPLYHLRLLAEAFVIKGLSLDHQAVSAASRVRLSEREEECLSCYLRACDTSLVYLQELDK
QMVVNPSSKAAKTGLVPLPLDIDLGFFQQAALQSAYLCLLHRGHLAQGAHQLRRVLRVVE
SRGSQSFRKAAARKLAEVLLSSVSEDSYWAPMSLPPSAWLQREGNAGPKDAMYPSPKPPQ
RYSTDSVFCPQDVVEEAVLLLLITESTASGDAVISRAPDHREERETSLQDATSVYDLLSI
GMARRGQYAMLSECLERAMKFSFNEFHLWHQLGLSLMACGKGVGAVSVLKECARMRPEDP
SLPMLAAKVCIGQLHWLEEAEALSQSVVSMGEEAAEFLSRAYLTVGLCCSLQASDATLKA
DRDGFNRRALQNLHKAHALDPHDAKIALYLSLQLALVRQVAAAMDPLQVALSLRGDDLHS
LHLLTLLLSAQKHHQHALETLTLALSQHPENFNLLFTKVKLEEALYGPGVALQTCQDMLQ
LWQSRYDFTRTSEGDDSSSIHPPEPLPLNRKPSGLHLTLPDFQDSETGSQSGPSIALSRL
EHAMSEVSAISSAHKQGPTYIWTTLERIWLQAGELFMAEGRVKEAQFCVQEAAVLFPNSH
SVLLLRGRLAELKGNQDEAKGLYDEALAIHPNGHRILLHLVRERDTHIQASCWCGVGVWV
WGRRCCGMRCRPRARPTRRGAAWGRPCSHRAAARLQTASSQPWSWSPPVPSGPSPSYPAS
CEEQTEGTTVLHTHIHIYIHTHTHTHTRV
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctttcatagggaaaatgaagccgccaaatttattttccgaagatttgagtcc
gcagttactccccgggtatcaggggagtacggtcaccgagacagatcgggatctagagcg
ggcatggcaaccagcagggtctccttctcgcaataccgtctggaagcggagatcgaccgc
tacagagctgagtgccagtgggacaagataccccctatcgtagagcaactagtggccgca
cgatttcacgaagacgatgactacgggacgctgttattggccgaggcccttctggaggag
tgtctacaggacaacctgagtcttttacgcaacgccactcctttgacggacatcaaccag
cccaaactgtcccgttccaagggctacctcaactccattctgagcaggggacggctggtg
cccaggcacctgaacgaggctcttctcctgatggccaaaatacactatgtccagggctgt
taccatgacgcacagggcatgtgtgcaagggtgggtatagatgagctgacgggggatgag
cagcccctctaccacctgcgtctgctcgcagaggcctttgtcatcaaaggtctgtccctg
gaccaccaggcagtgtcagctgcctcccgtgtccgtctgtctgagagagaggaggaatgt
ctttcctgctacctgagggcctgtgacacctctctcgtttacctgcaagaactcgacaag
cagatggtggtcaaccctagttctaaagcagctaagaccggtttggtccctctaccactg
gacattgacctgggcttcttccagcaggcggctctacagagtgcatacctgtgcctgctg
catagggggcacctggcccagggagcccaccagctgcgcagggtcctcagggtggtggag
tctcgaggctcccagagcttcaggaaggctgcagcgcggaagctagctgaggtgttgctg
agctcggtgagtgaggacagctactgggcgcccatgtctctcccaccctccgcctggctg
cagagagaagggaacgccggcccaaaggatgccatgtacccctctcccaaaccaccccaa
cgctacagtactgacagcgtcttctgtccccaggacgtggttgaggaggccgtgctcctg
ctgctcatcacagagtctacggccagcggagacgcagtcatcagccgagcccccgaccat
agggaggagcgggagaccagtctgcaggacgccacctctgtctacgacctgctgagcatc
ggcatggccaggagggggcagtatgccatgctgtctgagtgtctggaacgggccatgaag
ttctcatttaatgagttccacctctggcaccagttgggcttgtcactcatggcatgtgga
aagggtgtgggcgccgtgtctgtgctcaaggagtgtgccaggatgagacccgaggacccc
tcactgcccatgttggccgccaaagtctgcatcggccaactgcactggctggaggaggct
gaggccctgtctcagagtgtggtgtccatgggagaggaggctgcagagttcctgtcccgt
gcgtacctgactgtggggctgtgctgcagtctgcaggcctctgacgccactctgaaagct
gatcgggatgggttcaacagacgagcactgcaaaatctgcataaagcccatgcactggat
ccccatgatgctaagattgctctctacctgtctctccagctggctcttgtacgccaggtg
gcagctgccatggatcccctgcaggtggctctgtctctgcgtggggacgacctgcactcc
ctccacctactgacccttctgcttagtgcccagaaacaccaccaacatgccctcgaaacc
ctcacactagcgctcagccaacatcctgagaacttcaatctgctgttcactaaggtgaag
ctggaggaggctctgtatgggccgggcgtagcactccagacctgccaagacatgctgcag
ctatggcagagccgctatgacttcacacgtaccagtgagggggatgacagcagcagtatc
cacccaccagagccacttccactcaaccgcaaacccagtggcctccacctcaccctgcca
gacttccaggacagtgagactggttctcagagcggtccgtccattgctctttcccgcctg
gagcatgccatgtcagaggtgtcagccatcagctccgcccacaaacagggccccacctac
atctggaccaccctggagcgcatctggctgcaagcaggagagttgttcatggcagagggg
cgtgtgaaggaggcccagttctgtgtgcaggaggcagctgtgctcttccccaactcccac
tccgtgctgctgctaaggggccggctggccgagctcaaagggaaccaggacgaggccaag
ggtttgtacgatgaagccctggccattcaccccaacggacaccgcatactgctgcacctg
gtgagagagagagacacacacatacaggccagttgttggtgcggtgtgggcgtgtgggtc
tgggggagaaggtgctgcgggatgcggtgcaggcccagagcacgtcccacgaggcgtgga
gcggcctgggggaggccctgcagtcacagggcagcagccaggctccagactgcttcctca
cagccctggagctggagtcctcctgtcccatcaggcccttcaccatcataccccgcgagc
tgtgaggagcagacagagggtactactgtattacacactcacatacatatatatatacac
acacacacacacacacacacacgcgtatga
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