Oncorhynchus tshawytscha (Chinook salmon): 112253148
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Entry
112253148 CDS
T05605
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112253148
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
112253148
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
112253148
NCBI-ProteinID:
XP_024280888
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All DBs
Position
LG06:complement(79044227..79108206)
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AA seq
547 aa
AA seq
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MSLVEEYEEGEYGRAPKRLKTAEVEEGEELEEGEDSDSESAGLLGDVENVGAEKKALWTT
TKYGPARRDSGEDSHRIAQSPVVHVRGLCEAVVEADLVEALEKFGPICYVMMMPFKRQAL
VEFEMVESADKCVACGSSEAVYIAGQQAFFNYSTSKRITRPTNSDNPNSGNKVLLLSIQN
PLYPITTDVLYTVCNPIGSVMRIVIFKRNGIQAMVEFESVECAQKAKAALNGADIYAGCC
TLKIEYARPTRLNVIRNDNESWDYTKPYLVRRDVSERGKGRQAILGEHPSSYGDNGYGSH
CPLLPLPGNSRYKLSSHDIPEVVAYPLPQSSSYNNHGSSSVAMVSGLHPTKMNCTRIFNL
FCLYGNIEKVKFMKSVPGTALVEMGDEYAVDRAITHLNSIKVFGKRLNVCVSKQHAVIPS
QVFELEDGSSSYKDFAMTRNNRFTSQGQASKNIIQPPSCVLHYYNVPPCISEDQLLRLCS
EHDVPGFTKFKMFDAKPSSKTISGLLEFDSKTHAVEVLTVLNHYQIRIPNGSNPYTLKLC
FSTSSHL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgttgaagaatacgaggaaggggagtatgggagagcgccgaagcgactgaag
acggcagaggtggaggagggcgaggagctggaggagggagaggactcagactcggagtct
gcagggctactcggagatgtagagaatgtaggagccgagaaaaaagccctgtggaccaca
acgaaatacggacctgcaagacgggacagtggggaggactcccacaggattgcacagtcc
ccagtcgtccatgtcagggggctgtgtgaggctgtggtggaggctgacctggtggaggcc
ctggagaagtttggacccatatgctatgtgatgatgatgccctttaagcggcaggcgctg
gtggagtttgagatggtggagagtgctgataagtgtgtggcgtgtgggagtagcgaggcc
gtctacatcgcaggccagcaggccttcttcaactactccaccagcaagaggatcactcgc
cccaccaactcagacaaccccaacagtggcaacaaagtcctgctcctgtctatccagaat
cccctctaccccatcaccacggacgttctctacaccgtctgcaaccccatcggcagtgtg
atgcgcatcgtcatcttcaaacgcaacggcatccaggccatggtggaatttgagtccgtc
gagtgtgctcagaaagctaaggctgctctcaatggagccgacatctatgccggctgctgc
accttaaaaatcgaatatgcaaggccaactcgcttgaacgtgatcagaaatgacaacgag
agctgggactacacaaagccttacctggtccgaagagatgtttcagagcgtgggaagggc
aggcaggccatactgggggagcacccgtcctcttacggagacaatggatacgggtcacac
tgccccctgctgcctctcccagggaacagcaggtacaagctgagctcccacgacatccca
gaggtagtggcttaccccctgccccaaagctcctcctacaacaaccacggctctagctct
gtcgccatggtgagcggcctgcaccccaccaagatgaactgcacccgcatcttcaacctt
ttctgtctctatggcaacatcgaaaaggtgaagttcatgaagagtgtcccgggcactgcc
ctagtagagatgggggatgagtatgcagtggacagggccatcactcacctcaacagcatc
aaggtgtttggcaagcggcttaatgtctgtgtgtccaagcagcatgcggtcatacccagt
caggtgtttgaactggaggacggcagcagcagctataaggactttgccatgaccaggaac
aaccgcttcaccagccaaggccaggcctccaagaacatcatccagccaccctcctgtgtg
ttgcactactacaacgttcctccctgcatctcagaggaccagctactgaggctatgctca
gagcatgatgtgccgggtttcaccaagttcaagatgtttgatgcaaagccctcctccaaa
actatctctgggttgttagagtttgactccaagacgcacgcggttgaggtcttgaccgtc
ctaaaccactaccagatcagaataccaaatggctctaacccctacaccctgaagctgtgc
ttctccacgtcctctcacctctga
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