Oncorhynchus tshawytscha (Chinook salmon): 112253209
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Entry
112253209 CDS
T05605
Name
(RefSeq) actin-related protein 2-A isoform X1
KO
K17260
actin-related protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
otw04517
IgSF CAM signaling
otw04530
Tight junction
otw04810
Regulation of actin cytoskeleton
otw05100
Bacterial invasion of epithelial cells
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112253209
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112253209
09144 Cellular community - eukaryotes
04530 Tight junction
112253209
09142 Cell motility
04810 Regulation of actin cytoskeleton
112253209
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112253209
05100 Bacterial invasion of epithelial cells
112253209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253209
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112253209
04147 Exosome [BR:
otw04147
]
112253209
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Arp2/3 complex
112253209
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
112253209
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112253209
Exosomal proteins of other body fluids (saliva and urine)
112253209
Exosomal proteins of bladder cancer cells
112253209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
112253209
NCBI-ProteinID:
XP_042170664
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGNIEIKNIQKMDL
MVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMN
PTKNREKIIEVMFETYQFSGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSL
PHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLAL
ETTVLVESYQLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIHAADIDTRS
EFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVF
LGGAVLADIMKDKDNFWLTREEYQEKGVRVLEKLGVTVR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggatagccagggaaggaaagtggtggtttgtgacaatggaaccgggtttgtgaagtgt
ggctatgcaggctccaacttccccgagcacatcttccctgccttggtgggcaggccaatc
attcgctccacagccaaagtgggcaacattgagattaagaatattcagaagatggacctg
atggtgggcgacgaggccagcgagctgcgctccatgctagaggtcaactaccccatggag
aacggcatcgtcaggaactgggacgacatgaagcacctgtgggactacaccttcgggcct
gagaagctcaacatcgactccaggaactgcaagatcctgctcaccgagccgcccatgaac
cccaccaagaaccgagagaagatcattgaggtgatgtttgagacgtatcagttctcaggg
gtctacattgctatccaggctgtgctgacgctctacgcccaaggcctgctgacaggtgtt
gtggtggactctggggacggtgtgacacacatctgtccggtgtacgagggcttcagcttg
ccccatctgacacgacgcctggacatcgctgggagggacataacccgctacctcattaag
ctgttgttgctgagaggctatgcgttcaaccactctgcggactttgagacggtgcgtatg
atgaaggagaagctgtgctacgtgggttacaacatcgaacaggagcagaaactggctctg
gagaccaccgtgctggtcgagtcctaccagctcccagacggcagggtgatcaaggtggga
ggggagcgtttcgaggctccagaggctttgttccagccccatctcatcaacgtagaggga
gtcggggtggcagagctgctcttcaacactatccatgcagcagacatcgacaccaggtct
gagttctataaacacatagtgttgtcaggtgggtccaccatgtatccaggccttccatct
cgactagagagggagctcaaacagctctacctggaacgtgtgctgaaaggcgacgtggac
aaactctcgaaatttaagatccgcatcgaggacccgccgcggcgtaagcacatggtgttc
ctgggcggggccgtgctggcggacatcatgaaggacaaagataacttctggctgaccagg
gaggagtaccaggagaaaggtgtcagggtgctggagaaactgggagtcactgtcagataa
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