Oncorhynchus tshawytscha (Chinook salmon): 112253241
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Entry
112253241 CDS
T05605
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112253241
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112253241
Ion channels [BR:
otw04040
]
Ligand-gated channels
Serotonin (5-HT3)
112253241
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
112253241
NCBI-ProteinID:
XP_042178837
UniProt:
A0A8C8C507
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All DBs
Position
LG06:8503829..8509937
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AA seq
488 aa
AA seq
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MAAKDFSKMESQRWWVSSHQVLFIICCIMVQAPCLRCKIVVNCTNPNTISLLAALENVMK
LYSIRPVMNLSTPTNISMYFTLYGILGVEEKAQLLNTYIWLVKEWENEFFSWDPVQCGSA
NISLPRERFWSPDVVINEFMDENRAPIVPYVYIKHTGIVRDANPVRVVSSCNLEIYTFPF
DVQNCTFTFRSYIHHVSDIRIILGKKVEDILKRSISVLSTEGEWELMDIKSSKFKLSTFN
QGESNPYDELCFYIVLRRRATLYVVNLLIPSCFLITVDLFSFLLPPQNVDRSSFKMTLIL
GYSVFLLIVNDLLPVTGSTIPLINVFFAICLALMVASLLETILITNLLVAPCNFRPVPGW
VRVLVLRFMGTLVWLPQKSREDKIILNPVARDVKVCPLVTVERQVQTGEPGKMWAEADDP
ALAELRNLGNELQSIRLHVAQHVNGNQISQDWMQVGYIIDRLLFGVYCIFITFSFIVILG
IWSNSYNQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggatttttccaaaatggagtctcaacgatggtgggtcagttcccaccag
gttctgttcatcatctgctgcatcatggtacaggcgccatgcctgagatgtaagatagtg
gtgaactgcaccaaccccaacaccatatcccttctggctgccctggagaacgtcatgaag
ttgtactccatacgacctgtcatgaacctctcaacccccaccaacatcagcatgtacttc
actctctacggcatcctgggtgtggaagaaaaagcacaactgttgaacacatacatttgg
ctggtaaaggaatgggagaatgaatttttcagctgggacccagtccaatgcggctctgcc
aatatttctctccccagggaaaggttctggtcaccagatgtggtaatcaatgaatttatg
gatgaaaacagagctcccatcgtcccttatgtgtacattaagcacactggtatagtgcga
gacgccaaccctgtcagagtggttagctcctgtaacctggagatctacaccttccccttt
gacgtccagaactgcaccttcaccttcagatcctacatccaccacgtgtcggacataagg
attatcttagggaagaaggtggaggacatcctgaaacgctccattagtgtgttgtccacc
gaaggggagtgggagctgatggacatcaaatccagcaagttcaagttatcaacattcaat
cagggagaaagcaacccctatgatgagctctgcttctatattgtcctgaggcgcagagcc
accctctacgtggtgaacctcctgatccccagctgctttctcatcactgtggatctcttc
agcttcctgctgcctccccagaacgtggaccgctcctccttcaagatgaccctaattttg
ggctactccgtcttcctgctcatcgtgaatgaccttcttcccgtcacaggaagcaccatt
ccactgataaatgtgttcttcgccatctgcttggctctgatggtggccagcctgctggag
actattctcatcaccaacctcctggtcgccccctgtaacttccgcccagtgcctggctgg
gtccgagtgctcgtcctgcgcttcatgggcaccctcgtctggctgcctcagaaatccaga
gaggacaagatcattctcaatccagttgcaagagatgtgaaagtctgccctctagtgacg
gtggagagacaggttcaaacaggagaaccaggtaagatgtgggcagaggcagacgatcca
gccctggcggagctgaggaatctgggcaatgagctccagtccatccgcctccatgtggcc
cagcatgtgaacgggaaccagatctcccaggattggatgcaggtgggctacatcatagac
cggctgctgtttggcgtctactgcatcttcatcaccttcagcttcatcgtcatcctcggc
atctggagtaattcgtacaaccagtga
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