Oncorhynchus tshawytscha (Chinook salmon): 112253242
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Entry
112253242 CDS
T05605
Symbol
tbc1d23
Name
(RefSeq) TBC1 domain family member 23
KO
K22555
TBC1 domain family member 23
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253242 (tbc1d23)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112253242 (tbc1d23)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
Rhodanese
DUF4644
Motif
Other DBs
NCBI-GeneID:
112253242
NCBI-ProteinID:
XP_042178724
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All DBs
Position
LG06:841052..913837
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AA seq
688 aa
AA seq
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MADAVEEVLEGSWDQDLAEALDSGGSDLELEMDIGGAGLPAQQRAKLWKIALNVAGKGDS
LSSWDGVLDLPEQNLIHTRCQQLIDQLGCVAEEEGRDMVSDVECVITFYCKSRNITFTPD
LSWPHLLKPLLGLQLPRSDLYNCFYAIMNKYIPRDCVVKGRPFHLYRLLLQYHEPELCSF
LDTHPITPDSYTIHWLGSLFSSHCLPEVTQAMWDFYLQQADPFLIFFLLLIILVNAKDNI
LQQEGDSKEDIIKMLEDSPALLEADDIEDLFSLAQYYWSKTPLSLRKENQNLFGSSLVAL
KEEDMDLSQALCLPVSVPEILQANQLQPEGVRFFVVDCRPAEQYNAGHLSTAFHLDSDLM
LQNPSEFSLSVKSLLEAQKQSLESGSIASGEHLCFMGSGREEEDMYMNMVLAHFLQKNKE
YVSIAKGGFMALQQHLTDINVEGPDNYVHWIVSTSGSAEGDALSTTGDKGVKSLVNKMTF
ALKSKSVIAKEKMISFMENTATPVDRMSFTLPWPEKGVPDRHVSSSDRVGKPYRGVKPVF
SIGDEEEYDTDEIDSSSMSDDDRKEIVNIQTWINKPDVKHHVPCNEVKETGHMFPSHLLI
TATHMYCLREIASRKGFAYIQSRQALNSVVKITSKKKHPELITFKFGNSNTAGIEISAVE
RYLIPNAGDATKAIKQQIMKVLDALESS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagtggaggaagttcttgaaggcagctgggatcaggatctggctgaggcc
ctggactctggaggctctgacctggagctagagatggacatagggggagctgggctacca
gcccagcagagagccaagctgtggaagattgcgctgaatgtggcaggtaaaggagacagt
ctgtcctcgtgggatggagtcctggatcttccagaacagaaccttatacacacccgctgc
cagcagctcattgaccagctggggtgcgtggcggaggaggaggggcgtgacatggtgtct
gacgtagagtgtgtcatcacgttctactgtaagtcccgaaacatcaccttcacccctgac
ctctcctggccacacctcctcaaacccctgctgggcctgcagctgccccgctccgatctc
tacaactgcttctacgccatcatgaataaatatatcccacgggactgtgtagtgaagggc
cgtccgttccacctgtacagactgctgcttcagtatcatgaaccagaactctgctccttc
ttggacactcaccccataaccccagactcctacactatacactggctaggcagtctgttc
tccagtcactgcctaccagaggtgactcaggccatgtgggacttttacctccaacaggct
gaccctttcctcatcttcttcctcctgctcatcatcctcgtcaatgccaaagataacatc
ctgcaacaagaaggggacagtaaagaagatatcattaagatgttggaggactctcctgcc
ctgttagaggctgatgatatagaagacctgttctctctggcccagtattactggagcaag
acccctctgtctctcagaaaggagaaccagaacttgtttgggtccagcctggtggcactg
aaggaggaagacatggatctgagtcaggctctctgtctccctgtgtctgtccctgagata
ctgcaggccaaccagctgcagcctgaaggggttcggttctttgtggtggactgtcgacct
gctgagcagtacaacgctggacacctctctactgccttccacctggactcagacttgatg
ctgcagaacccatcagagttcagcctatcagtgaagtccctcctggaggcccagaaacag
agtctagagtctggctccatcgctagtggagaacacctctgcttcatgggttcagggagg
gaggaggaggacatgtacatgaacatggtgctggcacacttcctacagaaaaacaaagaa
tacgtcagtatcgctaaaggtggttttatggccctgcagcagcacctaacagacatcaat
gtggagggaccagacaactatgtccactggatagtcagcacctctggatcagctgaagga
gacgcgttgagcaccacaggagataaaggagtcaagtctctggtcaacaagatgaccttt
gccctcaagtccaagtctgtcatagcaaaggagaagatgataagctttatggagaacact
gctacacctgtagacagaatgtctttcactctcccctggccagagaagggggtccctgac
cgacatgtgagcagtagtgaccgggttggaaaaccttacagaggagtgaagccagtgttc
agcatcggtgatgaggaagagtatgatacagatgagattgacagctcgtccatgtcggat
gatgacaggaaggagatcgtaaacatccagacgtggatcaacaaaccagatgtgaagcac
catgttccctgtaatgaggtcaaggaaaccggacacatgttccccagtcacctgttgatc
acagcgacccacatgtactgtctgagggagatcgcgtccaggaagggttttgcctatatc
cagtccagacaggccctcaacagcgtggtcaagatcacctccaagaaaaaacacccagaa
ctcatcaccttcaagttcggcaacagcaacactgctggaatagagatctctgctgtggag
aggtatctgatccccaacgcgggtgacgccaccaaggccattaaacagcagatcatgaaa
gttctggatgccctggagagttcctag
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