Oncorhynchus tshawytscha (Chinook salmon): 112253253
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Entry
112253253 CDS
T05605
Name
(RefSeq) nuclear speckle splicing regulatory protein 1 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253253
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
Others
112253253
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
112253253
NCBI-ProteinID:
XP_042178895
LinkDB
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Position
LG06:11448181..11480165
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AA seq
662 aa
AA seq
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MAEFSIDQNKLPGVKEVVRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAKAKAHRQHRDIERSDNEIAQEIQEELVRQAKQQRMQEEKDAAIARKLQEK
ERKEERKRQKQLEANFEEEYYEDNAILPPLNPASRASLDLDDKPRWPGSNSLSLERDAVE
TRTNSLSRYPEHHLEGREGRRGRHGDAHPEHHCSSSRGKHGDGYPDYHHPTEGRSRGKEG
QRRRDHQGSQSTFFADNHEPRRQREEEGDRVVRRKERPARPPPPSHIPVKRDEASDRARH
REWERDGERDRQREPRRDEEIERDSPRQERHGERLREHSRDKDRHRERTKSRERGLDEVQ
DEPIPSSRSRAWDSGGEEAPSPGDEEGKGGARARLTLLSGPSELCEEAARRSPRMGRERG
ERGHRDPGEGPSTGKECSHTHPAPREPGRIVQGGPGNYGLGEATQGITKLDLREQELLDM
EVARKLQEEEVKASKMDKRAAQVAQDEEIARLLMEREKMEYKKSREKEKQGMRPEERRRP
EGGDYKPSSEEVVHPRLREEEYQKPRNHQKPARCWPHSVISLPGLLNLLPITMRMWSPAT
QGATILPGLQRDLRRLTKVSITDSDRGFLNHPSEFLFVFFFHCCIFKTPITFYWPRALEQ
CT
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttagcatcgatcagaacaaactgcctggagtaaaagaagttgttcgggat
tttgctgttctggaggaccactgcctggcccataacctccaggagcaggaaatcgagagc
cacttggcttccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaggaagaggaggaccggagggccaaggccaaggcccacagacagcacagagac
attgagcgcagtgacaatgagatcgcccaggagattcaggaggaactggtccggcaggcc
aagcagcagcggatgcaggaggagaaggatgcggccatcgctcgtaaactgcaggagaaa
gagaggaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataatgccatcctccctcccctcaacccagccagccgagcttctctggacctg
gatgacaaacccaggtggcctggttctaactctctctctttggagagagatgctgtggag
actagaaccaactctctttccagataccctgagcaccatttagagggtagggaggggaga
aggggcaggcatggagatgcacaccctgagcaccactgctccagtagcaggggcaaacat
ggagacgggtaccccgactaccaccaccccactgagggtagaagcagagggaaggagggc
cagaggcgcagagaccaccaggggtcccagtcaaccttctttgcagacaaccatgagccc
aggagacagcgagaggaggagggggatagggtggtcaggaggaaggagaggcccgcccgg
ccgcccccaccatcccatatccctgtgaagagagacgaggcttcggatagagcgagacac
cgggagtgggagagagacggggaacgagacagacagagagaacccaggagagatgaggaa
attgagagagactcaccaagacaggaaagacacggggagcgattgagagagcatagccga
gacaaagacagacaccgagagagaaccaaaagcagggaacgaggtctggatgaagttcag
gacgagcccatccccagtagccgcagcagggcctgggacagtggtggggaggaggcccct
agccctggggatgaagaggggaaagggggggccagggcccgcctgacgctcctctctggc
cccagtgagctgtgtgaggaggcggcaaggaggagccccaggatggggagagagcgaggg
gagaggggacacagggaccctggggagggccccagcacgggcaaggaatgctcccatact
caccccgctcccagggagccaggtcgtattgttcaaggaggaccagggaattacgggctg
ggcgaggccacccagggcatcactaagctggacctgcgggagcaggagctgctggacatg
gaggtggcccggaaactacaggaggaagaggtgaaggcaagcaagatggacaagcgtgcg
gcccaagtggctcaggatgaggagatagcccggctgctgatggagcgggagaagatggag
tacaagaagtccagagagaaggagaagcaggggatgaggcccgaagagaggaggaggcca
gagggaggagactacaagccaagctcagaggaggtagtgcatcccagactacgagaggag
gaataccagaagcccaggaaccaccaaaagcctgccaggtgctggcctcactctgtcatt
agcctgccaggccttctcaacctcctccccataactatgagaatgtggagtccagctact
cagggagccactattcttccgggtctccagcgcgacctgaggcgtcttacaaaggtgtct
attacagacagtgaccgaggcttcctaaaccatccatctgagtttttatttgtttttttt
tttcattgctgtatttttaaaactcccatcactttctattggccaagagccttggaacaa
tgtacctag
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