Oncorhynchus tshawytscha (Chinook salmon): 112253290
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Entry
112253290 CDS
T05605
Symbol
heatr5b
Name
(RefSeq) HEAT repeat-containing protein 5B isoform X1
KO
K24814
HEAT repeat-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253290 (heatr5b)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
112253290 (heatr5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laa1_Sip1_HTR5
HEAT_2
HEAT
TOR1L1_N
HisKA_3
Motif
Other DBs
NCBI-GeneID:
112253290
NCBI-ProteinID:
XP_042161584
LinkDB
All DBs
Position
LG24:complement(31858171..31937939)
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AA seq
2073 aa
AA seq
DB search
MELAHSLLLNEEALAQITEAKRPVFIFEWLRFLDKVLVAANKVDVKEKQKKLVEQLTGLI
SSAPGPPTRKLLAKNLATLYSIGDTFTVFQTLDKCNDIIKSKDDTPTYLPTKLAAVACVG
SFYEKMGRMLGSSFPDTITNMLKALKTAESQGRSEILLSLQKVLNGLGGAAASCHRDIYK
NARSLLTDRSMAVRCAVAKCLLELQNEAVFMWTTELENVATLCFKALEGSNYGVRVAVSK
LLGTVMATALMPKQAAVMRQNVKRATLDEVLELMATGFLRGGSGFLKSGGEMLKGGGSVS
REVRVGVTQAYVVFVTTLGGQWLERNFATFLSHVLDLVSHPRATQTHVEAVYSRRCVSFM
LRSTLGGLLGEKAQVASGKDICQAISKQMRAVGKEIDGGEISRFRALQKAVVNDTSGENK
AGAADVSASQHVMVCALKELGSLVQSLSATSSPLIQEPSIGLLETVSSVLLHPSMAARLA
AAWCLRCVAVALPYQLTPLLERCAERINNLKSSPEAVSGYSFAVAALLGGVHQCPLGVPH
SKGKLVVSIAEDLLRTAAQNSRLSLQRTQAGWLLLGALMSLGPSLVRYHLPKMLLLWRNV
FPRSQKEMEAEKARGDSFTWQVTLEGRAGALCAMRSFVAHCPELLTEDVIRRLMTPIECA
MTMMSHVPSVIKVHGTHLKASAAMVRLRLYDILALLPPKTYEGSFNALLRELVAEFTLTD
NSANTTTSLLRSLCHYDDSVLMGSWLQETDHKSIEDQLQPNSASGSGALEHDPSSIYLRV
PMGEAMPGPLPLGVSVIDASVALFGVVFPHVSFKHRLQMLDHFAECIKQAKGVRQQAVQL
NIFTAVLSALKGLAENKSTLGPEEVRKSALALVMGALDNPNPILRCAAGEALGRMAQVVG
EATFIARMAQYSFDKLRSARDVVSRTGHSLALGCLHRYVGGIGSGQHLKTSVSILLALAQ
DGTSHEVQTWALHSLALIVDSSGPMYRGYVEPTLSLVLTLLLTVPPSHTEVHQCLGRCLG
ALITTVGPELQGNGATISTIRSSCLVGCAIMQGHSDSLVQAAAISCLQQLHMFAPRHVNL
SSLVPCLCVHLCSSHLLLRRAAVACLRQLAQREAAEVCEYAMSLARNKDSTDSTTVNLNI
TETGLEGVLFGMLDRETDRKLCHDIHDTLGHMLSSLAVDKLSHWLKLCKDVLAATTGHKA
GGGVVAPVDLGKEEDDSEKQDEIDDDIMFTALGEDNNAKPSVAPRWVTRVFAADCLCRII
LLCENADKTHFDLARARSAKAKNPKGDLLVLHLSDLIRMAFMAATDNSNQLRMAGLQALE
DIIKKFASVPEPEFPGHVILEQYQANVGAALRPAFSPDTPSDITAKACQVCSTWIGSGVV
SDLNDLRRVHNLLVSSLDKVQAGKGSSSQLYSESATTMEKLAVLKAWAEVYVVAMKIKKE
AESRPVKEVKAGEEDEEEEEEEVGADILPPDSLIMLVQPELPSLSRLWLAVLRDYALLTL
PAEFSSQLPPDGGAFYTPETIDTARLHYRGSWAPVLHAVALWLSSTSFGEGEEEAPAVPP
QASGAPVYPQGNPGPTQSLEDLIKDRMHLMLGVSIEFLCFPRPEEPIEHVMSCLQALCTL
LDSPCARTHISEDQLLGVELLNVLHRLLLTRDPPAVQLQVTAVVQETIRAAQDHLTQQRE
TQGKEGGGEKDGLSLRGEGGETGELLPGKSLVFAAMELMVFILVRHLPQLNTRVNESPSH
LPLRPQPRLPEESTRLVAHTVSILAELPSLCSPAGSMTILPTVLFLITGVLKETAVKTPD
NSIPLPVSAALQGIKTIITCPLSRAEKTPTQWTGLIRSSLASVLEYSQPDESRPNMDEVS
MLTAMTLFLLSASSEVIGVTVLQQGCMERYRNALLSSDPWVQARCYQLLLSVFQHPSRAL
STPYIHALAPLMVEKLKGVERSRPGTVTELQAIQEGIGVLENLVGMAEEQNRVQLLALLV
PTLVSYLLDDKAFSSAPPASKGLHEFALQNLMRIGPLYPAAFKTVIGAAPELKTRLESAV
RANQASSKAKAAALLAQPTVQAAPTIKLKTSFF
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atggagttggctcacagtctacttctgaacgaggaagccctagcccagatcactgaggct
aagagacccgtcttcatcttcgaatggcttcgcttcctggacaaggttctagtggcagca
aacaaggtggatgtgaaggagaagcagaagaagttggttgagcagctgacagggttgatc
agcagtgcccctggccctcccaccaggaaactgctagcgaagaacctggctaccctctac
agcataggagacaccttcaccgtcttccagacactggacaagtgcaacgacatcatcaag
agcaaggatgacacgcccacttacctccccaccaaactagctgctgtggcctgtgttggg
tccttctatgagaagatggggaggatgctgggaagctcctttcccgacaccatcaccaac
atgctgaaagcactgaagactgcagagtcccagggtcgtagtgagattctactcagtcta
cagaaggtgttgaatggtcttggtggcgcagcagcctcttgccatagagacatctataag
aacgctcgttccctactcacagaccgctccatggctgtgcgctgtgctgtagctaagtgt
cttctagagctgcagaatgaggctgtattcatgtggaccaccgagctggagaacgtagct
actctgtgcttcaaggccctggaaggatcgaactatggagtgagggtagccgtatccaaa
ctactaggaaccgtcatggccacggccctgatgcccaaacaagctgcagtgatgcgtcag
aacgtgaaacgtgccacgctagacgaggtgttggagctgatggctacaggcttcctaaga
ggggggtctggcttcctgaagagcgggggggagatgctgaagggagggggctctgtcagc
agggaggtgcgggtgggagtcacacaggcatatgttgtattcgtgaccacgctgggcggc
cagtggctggagcggaactttgccacgttcctgtctcatgtcctggacctggtcagccac
ccgcgggccacccagacacacgtggaggcggtgtactcccgtcgctgtgtgtcgttcatg
ctgcgctccactctgggggggctgctaggggagaaggcccaggtcgcttcggggaaagac
atctgccaggctatcagtaaacagatgagggctgtgggtaaggagatagatgggggggag
atttcacggttcagagctttacagaaagcagtagtgaatgacaccagtggagagaacaag
gcaggagcagctgatgtttctgccagtcaacacgtgatggtctgtgccctcaaagagctg
ggcagcctggtgcagagtcttagtgccacatcctcaccgctcatacaggaaccctccatt
ggtctcctggagacggtctcctctgtgctgctccacccaagcatggcggcccgtttggcg
gcggcctggtgtttacgctgcgttgccgtggcgctgccctatcagctgactccgctgctg
gagcgctgtgcggagcgcatcaacaacctgaagagctctccagaggccgtcagcggctac
agcttcgccgtggctgctctgctgggcggcgtgcaccagtgtcctctgggcgtaccacat
tccaaggggaagctggtggtgagcatagctgaggacttgctccgtacagcagcccagaac
agccgtctttctctgcagagaacccaggctgggtggctgctgctgggggcactaatgtct
ctgggcccgtccctggtccgctatcaccttcccaagatgctgctgctgtggaggaacgtg
ttcccccgttcccagaaggagatggaggcagagaaggctagaggagacagcttcacctgg
caggttacgctggagggacgtgctggggcactctgtgccatgcgtagctttgtggcccat
tgtcctgagctgctgacggaggatgtgatccgcaggctgatgacacctatcgagtgcgcc
atgaccatgatgtcacatgtcccgtcagtcatcaaggtgcatggcacccatctgaaagcc
agtgcagctatggtgaggctgagactctatgacatcttggctctacttcccccgaagaca
tacgaaggtagtttcaatgccctgctgagagagctggtggcagagttcactctgactgat
aactcggccaacaccaccacctcgttgctacgctccctctgtcactatgacgacagtgtt
ctgatggggtcctggctacaggagactgaccacaagtctattgaggaccagctccagccc
aacagtgcgtcaggcagtggcgctctagaacacgacccctcctccatctacctgagggta
ccgatgggcgaggccatgcctgggcccctcccccttggcgtttctgtcatcgacgcctcc
gtcgctctgttcggagtggtattccctcatgtctcctttaaacacaggctgcagatgctg
gaccactttgcagagtgtattaaacaggccaagggggtcagacagcaggctgtccagctc
aacatcttcaccgctgtcctgagcgccctcaagggtctggcagagaacaagtccaccctg
ggtcctgaagaggttcgtaaatccgccctggcgctggtgatgggcgctctggacaaccca
aaccccatcctgcgctgtgctgctggggaggccttgggaaggatggctcaggtggtggga
gaggccaccttcattgcccgcatggcacagtacagctttgacaaactgaggtcagcccgt
gacgtggtctccagaacaggccactccctggctctgggctgtctgcacagatacgtagga
ggaattggttcaggacagcacctcaaaaccagcgtcagcatcctattggccctagcccag
gatggaacctctcacgaggtccagacgtgggccctccactccctggctctcattgtagac
tccagtggccccatgtatcgaggctatgtggagcccaccctctccctggtcctgaccctg
ctcctaaccgtacccccgtcacacactgaggtacaccagtgtctgggacgatgtctgggc
gctctcatcaccacggttggacccgaactacagggtaacggagcgaccatctcgacgatc
cgctcatcatgtctggtgggctgtgccatcatgcagggtcacagcgactccctggtgcag
gcagcggccatatcctgtctccagcagctacacatgttcgccccacgccacgttaacctc
tccagcctggtgccctgtctctgtgtccacctgtgtagctctcacctgttgctgcgtcgt
gcagcggtggcctgtctgagacagctggcccagagagaggctgcagaggtctgtgagtac
gccatgagtctggcccgcaacaaggacagcacggactcaaccaccgtcaatctgaacatc
acagagactggtttggagggggttctgtttggaatgctggaccgggagacggacaggaag
ctttgtcacgacatccatgacactctgggccacatgctctcctcgctcgctgtggacaag
ctctctcattggttgaagctctgcaaggatgtcctggctgctacgacaggtcacaaggct
ggaggaggggttgtggcaccggtagatctgggtaaagaagaggacgactcagagaagcag
gatgagatcgacgatgacatcatgtttacggcgctgggagaggacaataacgccaagccg
tctgtggcgccgcgctgggtgacccgtgtgttcgccgcagactgtctgtgtcgcatcata
ctgctgtgtgagaacgcagacaagacccactttgacctggcccgcgcccgctctgctaag
gccaagaaccctaaaggtgatctgttggtcctccacctctctgacctgattcgcatggcc
ttcatggcggctacagacaacagtaaccagttgaggatggctggtcttcaggctctggaa
gacattattaagaagtttgcctctgttccggagccagagttcccaggtcacgtgatcctg
gagcagtaccaggctaacgttggagctgctcttagaccagcgttttccccagatacacct
tctgacatcacagctaaggcatgccaggtgtgcagtacgtggatcggtagtggtgtggtc
agtgacctgaatgatcttcgtcgcgtccacaatctcctggtatcctcgctggacaaggtg
caggctgggaagggttcctctagtcagctgtacagtgagagtgctaccaccatggagaaa
ttggctgtactgaaggcctgggctgaggtgtatgttgtggccatgaagataaagaaggaa
gcagagtctcggccggtgaaggaggtgaaggcaggagaagaggatgaggaagaggaggag
gaggaggtgggagcggacattcttcctcctgacagcctaattatgctggtgcagcctgaa
ctaccgtctctgtctcggctgtggttggctgtcctcagagactacgctctgctcacactg
cctgctgagttctccagccaactgccccctgacggtggtgccttctacaccccagagacc
atcgacacagcccgtctccattaccgtggctcctgggcccccgttctccatgctgtggcc
ctctggctgagcagcaccagctttggggagggggaagaggaggcccctgctgtccctcca
caggcttctggggcaccagtctacccccagggtaatcctggacctactcagagcctggag
gatctgattaaggacagaatgcatctgatgttgggtgtcagtattgagttcctgtgtttc
ccaagacctgaggaaccaatagaacatgtcatgtcatgtctacaggctctctgtacccta
ctggactctccctgtgccaggacacacatcagtgaagaccagttgttaggtgtagagctg
ctcaacgttctccacagactactcctgaccagagatcctccagccgttcagctccaagtt
acggctgtggtgcaggagacgatccgggctgcacaggaccacctgacacagcagagagag
acacagggtaaggagggtggaggggagaaggacggtctgtctctccggggagagggaggt
gagactggggagttgctcccggggaagtccttagtcttcgctgccatggagcttatggtg
ttcatcctggttcgtcacttgccccaactcaacaccagggtgaacgagtcccccagccac
ctgcccctccgaccccagcctcgtctgcctgaggagagcacccggctggtggctcacacc
gtctctatactggctgaactgccgtcgctatgctcccccgcaggcagcatgaccattctc
ccgactgtactcttcctgataaccggggtcctgaaggagacggctgtgaagacacctgat
aactccatacccctgccagtctcagctgctctacagggtataaagaccatcatcacctgt
cctctgtcccgggctgagaagactcccactcagtggacaggactgattaggagtagtctg
gcttctgttctagaatattctcaaccagatgagtctcgtcccaacatggatgaggtcagt
atgctgacagccatgaccctcttcctgctgtctgccagttcagaggtcataggagtcact
gtgctgcagcagggttgtatggaacgctataggaacgcactcctctcctctgacccctgg
gtccaggcgcggtgttaccagctcctcctgtccgtgttccagcaccccagccgtgcgtta
tccaccccctacatccacgccctggcgccgcttatggtggagaaactgaagggggtggag
aggagtcgcccaggcacggtcacagagctgcaggccatacaggagggcatcggggttctg
gagaacctagtgggcatggcagaggagcagaaccgggtacagttgctagctctgctcgtg
cccaccctggtctcctatctcctggatgacaaggccttctcctctgctcctcctgcctcc
aagggcctacatgagtttgctctccagaacctgatgcggatcgggcccctctacccagct
gccttcaagacagtgattggagccgcacctgagctcaagacccgccttgagtcggccgtc
agagccaatcaggcgagcagcaaagccaaagcagcagccctattggcccagccaactgtg
caggccgcgcccaccatcaaactcaaaacgagtttcttctaa
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