Oncorhynchus tshawytscha (Chinook salmon): 112253390
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Entry
112253390 CDS
T05605
Name
(RefSeq) carbohydrate sulfotransferase 1-like
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
112253390
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112253390
Enzymes [BR:
otw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
112253390
Glycosyltransferases [BR:
otw01003
]
Unclassified
Sulfotransferases
112253390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
CBM_17_28
Atu4866
Motif
Other DBs
NCBI-GeneID:
112253390
NCBI-ProteinID:
XP_024281140
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Position
LG06:50218943..50222413
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AA seq
430 aa
AA seq
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MNSAMQCSWKAVILLALLSIAIQYTAIRTFTAKPFQMCPVTASNPLNCGMLWQDAVDSSF
DQRICDDFLYFTSNVSKKTHVLILATTRSGSSFVGQLFNQHQDVFYLFEPLYHVQTTLLP
RLSHSRTAGDTRVMLGASRDLLRSLYDCDLYFLESYIKPQPANHSTDKLFRRGASKALCS
LPVCDAFSPGELNIDEGECVRRCGGLNMTLASDTCRERRHVAIKTVRIPEVSDLRALVED
PRLNLKVIQLVRDPRGILASRIETFRDTYRLWRIWRATGRRPYNLDLTQLTMVCEDFLGS
VTTGLSRPPWLKGRYMLVRYEDLARNPLQKTKEIYEYLGLIMDKNVGEWIQNNTRGSNDL
SAKHKYSTVRDSAANAESWRLKLSYDMVDYTQTVCQQVLQELGYKTVSSPEELKNLSLTL
IEDKTFLPFL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagccatgcaatgttcctggaaggctgtgattctgctagccttactgtccata
gcgatccagtacacagccatcaggacgttcacagccaagccattccagatgtgtccagtg
acagcctcaaaccctctgaactgcggcatgctgtggcaggatgcggtggactcgtccttt
gaccagcggatctgtgacgacttcctttacttcacctccaacgtctccaagaagacccac
gttctcatcctggccacgacccgcagcggcagctccttcgtgggccagctgttcaaccag
caccaggatgtgttttatctgtttgagccgctctaccacgtccagaccaccttgctcccc
cgcctgtcccacagcaggacggcaggcgacaccagggtgatgctgggggccagcagggac
ctgctccggagcctctacgactgtgacctttacttcctggagagctacatcaaaccccag
ccggccaatcacagcacagacaagctgttccggaggggagcaagtaaggctctgtgctcc
ctgcccgtctgcgacgcctttagtcctggagagttgaacattgatgaaggagagtgcgtc
aggaggtgtggcggtctcaacatgacgctggcgtcggacacctgccgtgagaggcgccat
gtggccatcaagacggtgaggataccggaggtgagtgacctcagagctctggtggaggac
cctaggctcaacctcaaggtgatccagctggtcagggacccccgagggatcctggcctcc
cgcatcgagaccttcagggacacctatagactctggaggatctggagggccactgggagg
aggccctacaacctggacctcacccagctcaccatggtctgtgaggacttcctgggttct
gtgacaacgggccttagcaggcccccctggctcaaagggaggtacatgttggtcaggtat
gaggacctggccaggaaccctctccagaagaccaaggagatctatgaatacctgggtctg
atcatggacaagaacgtaggcgaatggatccagaacaacaccaggggaagcaacgatctg
tccgccaagcataaatacagcactgttcgggactcagctgccaatgcggaaagctggagg
ctcaaattgtcttatgacatggttgattacacacagactgtgtgtcagcaagttctacag
gagcttggttataagactgtcagttcccctgaggagctgaaaaatctgtctctgactctc
atcgaggacaaaacttttttaccttttttgtag
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