Oncorhynchus tshawytscha (Chinook salmon): 112253424
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Entry
112253424 CDS
T05605
Name
(RefSeq) tight junction-associated protein 1
KO
K06105
tight junction protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112253424
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Gene cluster
GFIT
Motif
Pfam:
Pilt
Rac1
HIP1_clath_bdg
CALCOCO1
Prominin
Bacillus_HBL
ATG17_like
DUF4200
Med9
OmpH
TPR_MLP1_2
DUF6267
Uso1_p115_C
DUF4795
betaPIX_CC
7TMR-HDED
ADIP
Motif
Other DBs
NCBI-GeneID:
112253424
NCBI-ProteinID:
XP_024281172
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Position
LG01:complement(55380655..55509434)
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AA seq
700 aa
AA seq
DB search
MTSAAPARKPYRKAPPQHRETRNSLPLFREDLSGSTPPAHTAGPNLPDPCQDSLSDADRI
KILQQQNEDLRRRLSHTTHKMEAMETEFETSRHYMREEMGRTRDDLEKMRDKFRRLQNSY
TASQRANQDLEEKLHALLRKVERDKKTMDQEIVELTNKLLDAKNTIDKLEELNERYRQDC
NLAVQLLKCNKSHFRNHKFADLPYELQDMVNKHMKASLPDKSSQGAQGQDSDTMSLTPAD
VVPTSVIARILEKPEPLVLNSAQSSSSAGRPQAEDVFVHVDMTGPQAGGGGRENGGPGHS
SRAPAQSSQAQELLQQNGMCRSQSSLSADGQSGEEGREGGAFEKLNPYPAPPPPHPLYPG
RKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEENERQRTVPNSPAVSDGGWR
SGTSSSSGGGGQRDPCRTPTQLDTADPLSNQSSPFSSPPQPPSAFASSGSSEEDLLANWQ
RMFVEKMAPSSEGTLVNRTSFSSETVKDLERTRTGKPVGGGSDRGALRGAYSDGEEGSST
RSWTASRESSLDTDTSSMADLRTRRGHYGADFSTEESEQLLMALDPLDNDRDNTSGDTVS
TAITVETSPAEANRNDFVDETGSVGSSAEERDILPQDFPVKAPRVLAGLEDYTKNTPPLP
ANSSTSTPGRPLKSPKRMGVHHLHRKDSLTRAQEHGNLLD
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgctgccccggccaggaagccataccgcaaggctccgcctcagcaccgcgag
acacgaaacagcctgcccttgtttcgagaggaccttagtgggagcacgccgcctgcccac
accgctggccccaacctgcctgacccctgccaggactccttatcagatgcagacaggatc
aagatcctgcagcaacagaatgaagacctgcgccggcggctctcccacaccacccacaag
atggaggccatggagacggagtttgagaccagccgccactacatgcgggaggaaatgggt
cgtacccgcgacgacctggagaagatgagagacaagttccgcagactgcagaacagctac
actgcctcccagcgggccaaccaagacctggaggagaagcttcatgccctgctccgtaaa
gtggagagggacaagaagacaatggaccaggagatagtggagctcaccaacaaactcctg
gacgccaagaacaccatcgacaagctggaggagttgaacgagcgctatcggcaagattgc
aatttggccgtgcagctgttgaagtgcaataagtcccatttcagaaaccacaagtttgca
gatctgccctatgagctgcaggacatggtgaacaagcacatgaaggccagtctgccggat
aagagttcccagggggcccagggccaggactccgacaccatgagcctgacgcccgccgac
gtggtgcccacctcagtcattgcccgcatcctggagaagcctgagcctctggtgctcaac
tctgcccagtccagcagcagtgcaggccggccccaggcagaggacgtgtttgtgcatgtg
gacatgactgggccccaggcaggaggagggggtagagagaacgggggtcccggtcacagc
agcagggccccagcccagagcagccaggcccaggagctcctccagcagaacggcatgtgt
cggagccagagcagcctgtcagcagacggccaatcaggagaggagggtagagagggtggt
gccttcgagaagctcaacccctacccagccccccctccgccccaccccctctatcccggc
cgcaaggtgatcgagttctcctcggacgacaaggtgaagatccccaagaacagccccctg
cccaactgcacctacgcaacacgccaggccatctccctcagcctggtgcagaatgatgag
gagaacgagcgccagcgcaccgtgccaaacagccccgctgtgtcggacgggggctggcga
tctgggacgtcgtcgtcctcagggggaggggggcagcgtgacccctgccgcacccctact
cagctggacacagcggaccctctctccaaccagtccagccccttcagcagcccccctcag
ccccccagcgcctttgccagctcaggtagctccgaggaggacctgctggccaactggcag
cgcatgtttgtggagaagatggcaccatcctctgagggcaccctggtcaaccgcacctcc
ttcagcagcgagacagtcaaggacctggagaggacccggaccggcaagccagtgggcggg
ggttccgacaggggggcactacggggggcctactcggacggggaggaggggtcctccacc
cgcagctggacagcaagccgagagtccagcctggacactgacaccagcagcatggctgac
ctccgcaccaggagggggcattatggagcagacttctccacagaggaaagcgagcagctg
ctgatggccctggacccactggacaacgaccgagacaacaccagtggcgacaccgtgtca
acggccatcactgtggagaccagcccggcggaggccaataggaatgattttgtggacgag
actgggtctgtaggcagctctgcagaggagagagacatcctgccacaggacttccccgtc
aaagccccccgggtcctggcagggctagaggactacacaaagaacacccctccccttccc
gcaaactcctccacttctacccccggccgacccctgaagagcccaaagaggatgggagtc
caccacctgcaccgcaaagacagcctgacccgggcacaggagcatggtaacctgctggac
tga
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