Oncorhynchus tshawytscha (Chinook salmon): 112253469
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Entry
112253469 CDS
T05605
Name
(RefSeq) protein piccolo
KO
K16882
protein piccolo
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253469
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112253469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-piccolo
FYVE_2
FYVE_CARP1-2
Siva
Motif
Other DBs
NCBI-GeneID:
112253469
NCBI-ProteinID:
XP_042178684
LinkDB
All DBs
Position
LG06:32905490..32934769
Genome browser
AA seq
2703 aa
AA seq
DB search
MFSNFLSGANPLSSVSSAVRGGLFGDNGEVDKQKAGPQHPGSVPGPGNAPQQQQGGPQLQ
GNGQAGQPAKPSGQKDPAKGGPQQQGPPKGGPQQQGPPKGGPQQQGPPKGGPQQQGPPKG
GPQQQGPPKGGPQQQAPQQQGPTKGGPQQQHAPQQQTPARGGPQQQAPDKGGPQQQGSPK
VGAQPQVSPKGGPQQQGPAKDGPQQQGSPKVGVLPQNPKGPQQQGPAKGGPQQQGSPKVG
AQPQGSPKVGAQPQGSPKIGTQQHGSPRTTPQQQGSPRTTPQQQGSPRTTPQQQAAGKAG
HQSKAGPMAGAKPLCPVCNTTGLNLHSKEPPNYNTCTQCKTVVCSFCGFSPPDSGGKEWL
CLTCQMQRALGGSDPPGTPKMKPQPSPNKASISPAPQKKDTSTQGSIHKNPITSATQPPK
AETAKAADPSPVPAQNAPQENRRTSGPQKPPEQPGQPGHKQSNATPCTQEEPGKPQQELP
KDGASPANVVPQLQAQAPKQESGGFFGFGGPKSQPDSSKADDSVSGKMFGFGSSIFSSAS
TLITSAVQDEPHTTPPGSPKVSAAAQASPKMPPTKETKPPAAQKAEEKKAEQPQQAMVPP
SVQVNVDKPPSEPPKGTASYQPSPKAGQSTCPLCKVDLNMGSKDPPNYNTCTECKNTVCN
LCGFNPMTNVTEVKEWLCLNCQMKRMEPTGPPMMKPQASPNKGSAPQKATVTPIATQKKD
IPTPGSPQRKPSTSATEPLKADAARAADLQKPASPAPVQKAPQENRRTSGPQKPPDQPGQ
PGHERSNATLSQQVPGKPQQEPPKGGTSPAKAVPTLQAKPPKQESGGFFGGFGGPKSQIS
SKPEDSVSGKVFGFGSSIFSSASTLITSAVQDEPHTTPPGSPKVSAAAQASPKMLPTKET
KPPAAQKAEEKKAEQPQQAKVPPSVQVNVDKPPSEPPKGTASYQPSPKAGQSTCPLCKVE
LNMGSRDPPNYNTCTECKNTVCNLCGFNPMPNVTEVNVWLCLNCQMHRALGGMEPQGPTM
MKPKPSPNKVSAPAAPQKRDTLTASGPQKVATAPASPNKESVTPASQPVPSKPEESVSGK
MFGFGSSIFSSASTLITSAVQDEPHTTPPASLKVSAPFALQKQETPTPTGAQKGAPTPVS
PQKEAQTPAIAPKKDTPMPASPQRKPDSPTMTAKQDQKPSSPLKPGDPSGAKQGSAAQPQ
QQPLQQKTPQVQPQQTPASALKAEPVKPQQTPASALKAEPVKPQQTPASALKAEPVKPQQ
QPPKVGTSPGPAQKTPQENRRTSEVQKPPQQPSPGRRQSIAIPSTQQHPKQESGGFFGFG
GPKSQSTPSKPEDSVSGKMFGFGSSIFSSASTLITSAVQDEPHTTLPASPMVSAPASPKM
APAKETKPPAVQNAEEKKAEQPQQAKVPTLLQANVDKPPSEPPKGAASSQPALKAGQSTC
PLCKMELNKGSKDPPNYNTCTECKNTVCNLCGFNPMPSVTEMKEWLCLNCQMQRALGGIE
PPEPLMMKLYPNKVFAPQTVTVTPIAAQKDIATPAASVKTDSPIPSSPQRKPVPPAADIS
KAEATKAAGTQMPASPAQMASQGNRRASEPQKPPQQPSQPGRRQSSAIPDTQQHPKQESG
GFFGFGGTKSQSTPSKAEESVSGKMFGFGSSIFSSASTLITSAVQDEPHTTLPASPMVSA
PASPKMAPAKETKPPATERAEESKAEQPQQAKVPPSVQAKVDQPSSEPPKGVVSSQPALI
AGQSTCPLCKVDLNIDSKDPPNYNTCTECKNTVCNLCGFNPMPHVTEVKEWLCLNCQMQR
ALGGMEPPEPLMMKPQPLLNKVSTPVAPQKDPPATQKVKETVIPAVDQKKAASTLQKEET
TTLAAPQKETPLPASSKMGETPVTALKQDTPTPDSPQNKKYPTPPGVSVTDEVPTTALPV
KKDVSASALIKEEPTSASPLIKEVTGSPLTKGAPASPQNNKEHILPGSQNRKVSPTPGST
QDNYAVQSGLPLKKEAPFSTAVETKEVQLPAAVISNDAPVPDSLKTNETTTLGSAMKKER
SSTEISIDNQKPAIVQKSMEPPATPTNKQNEVVQPLQQPEKKMPAAQPLAQVQAQEAPKP
DPKITPPKQELGKPASSAPAQKALENRRTSEPQTPPQQPSQSSAIPSTQQPPKQESGGLF
GFGGPKSQSTPSKAEESVSGKMFGFGSSIFSSASTLITSAVQDEPHTTLPASPMVSAPAS
PKMPPAKETKPPAVQNAEEKKAEQRQQVKVPTLLQANLDTPPSEPPMGEASSQPSPKAGQ
STCPLCKVDLNMGSKDPPNYNTCTECKNTVCNLCGFNPMPHETEVKEWLCLNCQMQRALG
GMEPPGPPMIKSQPFPSKVSTPAASLKLTPAPAKPQKEEIPAPAAAQKEIPPPTVPQETL
IPAGTPSTAAVKKEENPAPGSPQNKHAPPAVAAKDKQEPRIVQKPVDQTIPVTPIPSGAA
TPAQQPEKQTPPLQQPDAKPPPQLQPQQVPKIDPKTDPLMQEPGKPQQQLPKGGTSPAKA
VSQPQAKPPKQSVGFFGFGGAKSQPAQSNPEESVSGKMFGFGSSIFSSASTLITSAVQDE
PHTTLPASPMVSAPASPKMPPAKETKPPAVQNAEEKKAEQPQQAKVPTLLQANVDKPPLE
PPKGAASSQPALKAGQSTCPLCKVELNKGSKDPPNYNTCTECKNTVCNLCGFNPMPHETE
VRL
NT seq
8112 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaactttctaagtggggccaaccccctcagctctgtctcctctgctgtcaga
ggaggtctttttggggacaatggggaggttgacaaacagaaagcaggccctcagcatcca
gggtcagttcctggcccggggaatgccccacagcagcaacagggaggaccccagctgcag
gggaacggtcaggctggtcaaccagccaaacctagcgggcagaaagaccccgctaagggt
ggtccacaacagcaaggacctcctaagggtggtccacaacagcaaggacctcctaagggt
ggtccacaacagcaaggacctcctaaaggtggtccacaacagcaaggacctcctaagggt
ggtccacaacagcaaggacctcctaagggtggtccacaacagcaagcccctcaacagcaa
ggacctacaaaaggtggaccacaacaacaacatgccccccaacagcaaacccctgctagg
ggtggaccacaacagcaagcacctgataaaggtggaccgcaacaacaagggtcacctaag
gttggcgctcagccacaagtgtcccctaagggtggaccacaacagcaaggacctgctaaa
gatggaccccaacagcaagggtcacctaaagttggagttctgccacaaaatcctaaggga
ccacaacagcaaggacctgctaagggtggaccccaacagcaagggtcccctaaggttgga
gctcagccacaagggtcgcctaaggttggagctcagccacaagggtcccctaagattggc
actcagcagcatggttcccctaggactacaccacagcagcagggttcccctaggactaca
ccacagcagcagggttcccctaggactacaccacagcagcaagccgctggtaaagctggg
catcagtctaaagccggacctatggctggagctaaacccctgtgcccagtgtgtaacact
accggactcaacctacactccaaggagccacccaactataacacctgcacacagtgtaag
actgtcgtctgcagcttctgtggcttcagtcctcctgactctggcggtaaggagtggctg
tgtctgacctgccagatgcaaagagcactcggaggctcggacccacctggaaccccaaag
atgaaaccccagccttcacccaacaaagcctctatatctcctgcaccacagaagaaagac
acctctacacaaggctccatccataaaaaccctattacatcagcaacacagccacccaag
gcagagactgctaaagcagcagaccctagcccagtacctgcccagaatgcaccacaggag
aaccggagaacatcagggcctcagaaaccgccagagcagccaggccaacctgggcataag
cagagtaatgccaccccatgcacacaggaggagcctgggaagcctcagcaagagcttcca
aaggatggagcctctcctgccaacgttgtgccacagctacaggctcaggcccccaagcaa
gagtcagggggcttctttggctttggtggtcctaagtctcagcctgattcctcaaaggct
gatgattcagtgtctggtaagatgtttggctttggctcctccatcttcagctctgcatcc
actttgatcacctcagctgttcaggatgagccccacaccacaccaccaggttccccgaag
gtgtctgcagcagcccaggcctctcccaagatgcctcctacaaaggagaccaaaccacct
gctgctcagaaagcagaggagaagaaagcagagcaaccccaacaggccatggtcccccca
tcagtacaggtcaacgtggacaaacccccatcagagcctccaaagggaacagcatcctac
caaccatctcccaaagcaggccagtccacctgtccactctgcaaggtggacctcaacatg
ggctccaaggaccctcccaactacaacacctgtaccgaatgcaagaacactgtctgcaac
ctctgtggtttcaaccccatgacaaatgttactgaggtgaaggagtggctgtgtctgaac
tgccagatgaagagaatggaacccacaggacctcccatgatgaaaccccaagcttctcca
aacaaaggttctgcacctcagaaggccactgtcacacccatcgctacccaaaagaaagac
attccaacaccaggctctccccagagaaaaccttctacatcagcaacagagccactcaag
gcagatgctgctagagcagcagaccttcagaaaccagccagcccagcacctgttcagaag
gcaccacaggagaaccggagaacatcagggcctcagaaaccaccagatcagccagggcaa
cctgggcatgagcggagcaatgccaccctgtcacagcaggtgcctgggaagcctcagcaa
gagcctccaaaaggtgggacatctcctgccaaagctgtgccaacactacaggccaagccc
cccaagcaggagtcagggggcttctttggtggctttggtggtcctaaatctcagatttcc
tcaaagcctgaagattcagtgtctgggaaggtgtttggctttggctcctccatcttcagc
tctgcatccactttgatcacctcagctgttcaggatgagccccacaccacaccaccaggt
tccccgaaggtgtctgcagcagcccaggcctctcccaagatgctccctacaaaggagacc
aaaccacctgctgctcagaaagcagaggagaagaaagcagagcaaccccagcaggccaag
gtccccccatcagtacaggtcaacgtggacaaacccccatcagagcctccaaagggaaca
gcatcctaccaaccatctcccaaagcaggccagtccacctgtccactctgcaaggtggaa
ctcaacatgggctccagggaccctcccaactacaacacctgtaccgaatgcaagaacact
gtctgcaacctctgtggattcaaccccatgccaaatgttactgaggtcaatgtgtggctg
tgtctgaactgccagatgcacagagcacttggaggaatggaacctcaaggacctaccatg
atgaaacccaagccttcccccaacaaagtctctgctcctgctgctcctcaaaagagagac
acactaacagcatctggtccccaaaaagtggccactgcaccagcctcacccaacaaggag
tcagtgactccagcctctcagcctgtcccctcaaaacctgaagagtcagtgtctgggaag
atgtttggctttggttcctccatcttcagctctgcatccactttgatcacttcagctgtt
caggatgagccccacaccacaccgccagcttccctcaaggtgtctgcaccctttgcgctt
caaaagcaggagactcccacaccaactggtgcccaaaaaggtgcaccaacaccagtgtca
ccccaaaaagaggctcaaacaccagccatagccccaaagaaagacaccccaatgccagcc
tccccccagagaaagccagactcccccacaatgactgcaaagcaggaccagaaaccttca
agtcctttaaaaccaggagacccatcaggggctaagcaggggagtgctgcacaaccacag
cagcagcccctacagcagaagactccacaagtccagcctcagcagaccccagcaagtgca
ctgaaagcagaacctgtgaagcctcagcagaccccagcaagtgcactgaaagcagaacct
gtgaagcctcagcagaccccagcaagtgcactgaaagcagaacctgtgaagcctcagcaa
cagcctcctaaagttgggacctctccaggaccggctcagaagacaccacaggaaaaccgg
agaacatcagaagttcagaaaccaccacagcagcccagccctgggcgtaggcagagtatt
gccattccgtccacacagcaacaccccaagcaggagtcaggaggcttctttggctttggt
ggtcccaaatctcagtctaccccctcaaagcctgaagattcagtgtctgggaagatgttt
ggctttggctcctccatcttcagctctgcatccactttgatcacctcagctgttcaggat
gagccccacaccactctgccagcttcccccatggtgtctgcaccggcctctcccaagatg
gcccctgcaaaggagaccaaaccacctgctgttcagaatgcagaggagaagaaagcagag
caaccccaacaggccaaggtccccacattattacaggccaacgtggacaaacccccatca
gagcctccaaaaggagcagcatcttcccaaccagctctcaaagcaggccagtccacctgt
ccactatgtaagatggaactcaacaagggctccaaggaccctcccaactacaacacctgt
actgaatgcaagaacactgtctgcaacctctgtggatttaaccccatgccaagcgttact
gagatgaaggagtggctgtgtctgaactgccagatgcagagagctcttggaggaattgaa
cccccagaacccctcatgatgaaactgtatcccaacaaagtttttgcacctcaaacagtc
actgtcacacctattgcagctcaaaaggacattgcaacacctgctgcatctgtgaagaca
gacagtccaatcccaagctcccctcaaaggaaaccagttccccctgcagctgatatatca
aaagctgaagctactaaagcagcaggcactcaaatgccggcaagcccagctcagatggca
tcacaagggaaccggagagcttcagaacctcagaaaccaccacagcagcccagccagcct
gggcgtaggcagagtagtgccatcccagacacacagcaacaccccaagcaggagtcagga
ggcttctttggctttggtggtaccaaatctcagtctaccccctcaaaggctgaagagtca
gtgtctggtaagatgtttggctttggctcctccatcttcagctctgcatccactttgatc
acctcagctgttcaggatgagccccacaccactctgccagcttcccccatggtgtctgca
ccggcctctcccaagatggcccctgcaaaggagaccaaaccacctgctaccgagagagca
gaggaatcaaaagcagagcaaccccagcaggccaaggtccccccatcagtacaggctaaa
gttgaccaaccctcatcagagcctccaaaaggagtagtatcctcccaaccagctctcata
gcaggccagtccacctgtccactctgcaaggtggacctcaacattgactccaaggaccct
cccaactacaacacctgtaccgaatgcaagaacactgtctgcaacctctgtggatttaac
ccaatgccacatgttactgaggtgaaggaatggctgtgtctgaactgccagatgcagaga
gctcttgggggaatggaacccccagaacccctcatgatgaaaccccaacccttactcaac
aaagtttctacacctgttgcacctcaaaaggaccctccggcaactcaaaaggtaaaggag
actgtcatacctgctgtagatcagaagaaggccgcctccacactccaaaaagaagagaca
accactcttgctgcaccacaaaaggagactccattaccagcctcatccaaaatgggggag
acaccagttacagctttaaagcaggacactccaacaccagattcaccacaaaataaaaaa
tatcctacaccaccaggtgtgtctgtaacagatgaggtcccaaccacagctttgcctgtc
aagaaggacgtttctgcctcagcccttatcaaggaggaaccaacttctgcctcccctctc
atcaaggaggtcactggttcacctctcactaagggggcaccagcctcacctcaaaataat
aaggaacatatactacctgggtcacaaaacagaaaggtgtccccaacaccaggttcaacc
caagataactatgctgtacaatcaggtttacctctgaagaaggaagcaccattttcaaca
gcagtagagactaaagaggtccaacttccagctgcagttataagcaatgacgcacctgtt
ccagattcactcaaaacaaacgagacaacaacacttggctccgcaatgaaaaaagagcgt
tcatctactgagatctcaattgacaaccagaaacctgcaattgttcaaaagtcgatggag
ccaccagccacacctacaaacaagcagaatgaggttgttcaacccttacagcagccagaa
aagaaaatgcctgctgcacagcctctggcacaagtacaggcccaggaagctccaaagcca
gaccccaaaatcactcccccaaagcaggagcttgggaaaccagccagttcagcacctgct
cagaaggcactagagaaccggagaacatcagaacctcagacaccaccacagcagcccagc
cagagtagtgccatcccatccacacagcaaccccccaagcaggagtcaggaggcttattt
ggctttggtggtcccaaatctcagtctaccccctcaaaggctgaagagtccgtgtcgggt
aagatgtttggctttggctcctccatcttcagctctgcatccactttgatcacctcagct
gttcaggatgagccccacaccactctgccagcttcccccatggtgtctgcaccggcctct
cccaagatgccccctgcaaaggagaccaaaccacctgctgttcagaatgcagaggagaag
aaagcagagcaacgccagcaggtcaaggtccccacattattacaggccaacttggacaca
cccccatcagagcctccaatgggagaagcatcctcccaaccatctcccaaagcaggccag
tccacctgtccactctgcaaggtggacctcaacatgggctccaaagaccctcccaactac
aacacctgtactgaatgcaagaacactgtctgcaacctctgtggattcaaccccatgcca
catgaaacagaggtaaaggaatggctgtgtctgaactgccagatgcagagagctcttgga
ggaatggaacccccaggaccgccgatgattaaatcccaaccctttccaagcaaagtctcc
acacctgctgcatctctaaagctgaccccagcaccagctaaaccccaaaaggaggagatt
ccagcacctgcggctgcccaaaaagagattcctccacccactgtacctcaggagacacta
ataccggctggaaccccatcaacggctgcagtcaaaaaggaggagaacccagcaccagga
tccccacaaaacaaacatgctccacctgctgtggctgcaaaggacaaacaggaacctaga
attgttcagaaaccagtggaccaaacaattccagtgacacccatacccagtggtgctgct
acacctgcacaacagccagaaaagcaaactcctccactgcaacagcctgatgctaagccc
ccaccacaactacagccccagcaagttccaaagatagaccccaaaactgatcccctaatg
caggagcctggaaagcctcaacaacagcttccaaaaggtgggacctctcctgccaaagct
gtatcacaaccacaggccaagcccccaaagcagtcagtgggcttctttggctttggcggt
gctaaatctcagcctgctcagtcaaatcctgaagagtcagtgtctgggaagatgtttggc
tttggctcctccatcttcagctctgcatccactttgatcacctcagctgttcaggatgag
ccccacaccactctgccagcttcccccatggtgtctgcaccggcctctcccaagatgccc
cctgcaaaggagaccaaaccacctgctgttcagaatgcagaggagaagaaagcagagcaa
ccccaacaggccaaggtccccacattattacaggccaacgtggacaaacccccattagaa
cctccaaagggagcagcatcctcccaaccagcactcaaagcagggcagtccacctgtcca
ctctgcaaggtggaactcaacaagggctccaaggaccctcccaactacaacacctgcact
gaatgcaagaacactgtctgcaacctctgtggatttaaccccatgccacatgaaacagag
gtaagactgtga
DBGET
integrated database retrieval system
