Oncorhynchus tshawytscha (Chinook salmon): 112253532
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Entry
112253532 CDS
T05605
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253532
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
112253532
Small GTPases and associated proteins
Rab associated proteins
112253532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
FYVE_2
PDZ_6
Nudix_N_2
Zn_ribbon_recom
TMEM171
Motif
Other DBs
NCBI-GeneID:
112253532
NCBI-ProteinID:
XP_042179507
LinkDB
All DBs
Position
LG06:complement(70469362..70535056)
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AA seq
1548 aa
AA seq
DB search
MSASVGPPGGARPPVVPASMPEPDLSHLTEEERKIIMAVLARQKEEEEKEEAMLKEEKPI
QARTVNLVGQKKPQQNDVRGIQQQMSSYRETVRRVGEETRRQTTTGQHRDDAPTCGICHK
TKFADGCGSLCSYCQTKFCARCGGRVSLRTNSEDKVVMWVCNNCRKQQEILTKPGEWFSG
PGKPGLGSGISDPAMCGLNPGDKKLRSHFQVPLGPLDPNHPGDPGLAPGMDPRSRSEPPR
KPGDQNIKGRGERHPRLHTQVSVDRDQWERDRREGRRLTKGRSLEHDPVGVPRWTEEGYH
IDPHAPRHLSQPQPGEPLGGRHPLQPQGRGRGVGMGIGFESVGGIGGQPEAMLGQRTVVG
GTRGPQGLGPPQLQPPELREPPGTAPGPGQDPLLRRSKRDKAESMLRNDSLSSDQSESLR
PPPPRPYKSKRGGAGKRQTSVSSSEEEGGTTPEYSSCEDAEIESVSERGGRGKRRGDWEC
YPLDPTVWHHPVTWQPSKEGDHLIGRITLSKRSAMPKEAGAPLGLKVVGGRVTEAGRLGA
FITVVKKGSLADIVGHLRAGDEVLQWNGKMLPGATQKEVYNIILNSQAEPQVELVVSRPI
GDIPRIPDTSHPPLESTLTAGSSSFESQKMERPSISVMSPTSPSTLRDHPQLMPGQLAVL
PGRLLVKLWYDKVGHQLIVNVVQATELPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVK
KSGEPKWNQTFVYSHIHRRDFRQHMLELTMWDQPRLPDENSMFMGEILIELETAPLDDKP
HWYKLQTHDVSSIPLPWPSPYMPRRNTDTPSKKLQRSQRVKEPEYDDTGPMSKAAERGSR
ERGRQQKDPHATTLEVPEQKRTPQHRSRSVSPHREEQGRGRSRPANVPTQRSLDDEIHHS
RRSRSPTRYYDSTRGHYQEQDYVDDSEVILIHQSMRGKSAECLHTESSTLPACLKTGSMV
RSSVVTAIRSSFTQRVLRFTDEITVSDLHTSLDRVKTRSASTNCLNPERNHSVPSPDPQS
CSQSLPRRRPASPRILIQHASPEDDSKWMMEPLVPRQETVNHLSAKKRQTRSLDSSTCHT
LGKKLPDNDRGHLQGGASLSSSVMSSSAARRVRQLPQVPDKSSSPVEQALAAEERVRQLQ
MKVQQRDSYRSSAAPSTSSRDVERVLKSKREVSHLSLELYKDQRRTSCENVSRKSSESDV
SDVSAISRTSSASRISSTSYISIQSERPRGRFNKAMRASGRSMLKSTSVSGEIYGIEHTD
GSQSDTALGGGKKRRSSLSQRVVAIVGLPSRRSCSTSQLTSQKAVVVDTKKKGKKKNKIQ
IQRSTEVGMAVEYPRSAMNRQASRDSTDGSMNSYSSEGNLIFSGMRLGVDSQFSDFLDGL
GPAQLVGRQTLATPAMGDVQIGMMDKKGQLEVEVIRARGLTPKPGSKSLPAPYVKAYLLD
NGACKAKKKTKIARKTLEPLYQQALLFEESPQGKVLQVIVWGDYGRLDHKCFMGVAQILL
EELDLSSTVIGWYKLFPPSSLVDPTLASLTRRASQTSLDSSGPAGMRS
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtgggccctccgggcggcgcgcgtccacccgtcgtgccggcgtccatg
cccgaaccggacctgagccatctgacggaggaggagaggaagatcataatggccgtgcta
gctcgacagaaggaggaggaggagaaggaagaggccatgttaaaggaggagaagcccatc
caagcaagaactgtgaacctggttgggcagaagaagcctcagcaaaacgatgtccgaggt
atccagcagcagatgtcgagctacagggagacggtgcgacgggttggggaggagacgcgc
cggcagaccaccacgggccagcaccgggacgacgctcccacctgtggcatctgccacaag
accaagtttgctgacggctgtggcagcctctgctcttactgccagaccaagttctgtgcc
cgttgtggagggagggtgtccttacgcaccaacagtgaggacaaagtggtgatgtgggtg
tgtaataactgccgtaagcagcaggagatcctcactaagccaggggagtggttctcaggt
ccagggaagccaggtctaggctcaggcatcagtgacccggccatgtgtggcctgaacccc
ggtgacaagaagctccgttcccacttccaagtccccctggggcccctcgaccccaatcac
cccggtgacccaggactggcacccggaatggacccccgctcacgtagcgagccgccgaga
aagccgggcgatcagaacattaaaggtcgaggtgagcgtcaccccagactccatacccag
gtgtcagtggaccgggaccaatgggagcgggaccggagggagggccggcggctgactaag
ggtcgctctctggaacatgatcctgtgggggtcccccgatggacagaggagggctaccac
atagacccccacgccccccgacatttatcccagccccagccaggggagccactggggggc
aggcaccctctacagccccaggggcgaggcaggggggttgggatggggattgggtttgag
agtgttgggggcattgggggccagcccgaggctatgctgggccagaggacggtggtgggg
ggcactagggggccacagggcctcggccctccacagctccagcccccagaactcagggag
ccccctgggacagccccaggccccggtcaggatcccctcctgcgccggtccaaacgggac
aaggctgagagcatgctgcgcaatgattcgctcagctcggaccagtcagagtctctgcgg
ccgcccccgccacggccgtacaagtcaaaacgtggcggtgccgggaagagacagacatct
gtcagcagctcagaggaagagggagggaccacgccggagtatagcagctgtgaggacgcc
gagattgagagtgtcagcgagagaggtgggagaggtaagaggagaggggactgggagtgc
tacccgctggaccccactgtgtggcatcatccggtgacatggcagccatccaaagagggt
gaccatctaattggccgaatcaccctgagcaagaggagtgctatgcccaaagaggccgga
gcaccgctggggctgaaggtggttgggggaagggtcacagaggcgggcagactgggagcc
ttcatcactgtagtcaagaagggcagtctggccgacatcgtgggacaccttcgagcaggg
gatgaggttctgcagtggaacggcaagatgttgccaggagcaacccagaaagaagtttat
aatatcattctcaattcccaagcagaacctcaagtggaactagtggtgtcccggcccatt
ggtgatatcccaagaatcccagacacgtcccaccctccattagaatctaccctcacagca
ggttccagttcatttgagtcccagaagatggagcggccatctatatcggtcatgtccccc
accagtcccagtacacttagagaccacccacagctaatgcctggacagcttgcagtactg
cccggacgacttttagtcaagctgtggtatgataaggtgggacaccagctgattgtgaac
gtggtacaggctacagagctgcctccccgcccagatgggcgtcccagaaacccctacgtc
aaaatgtacttcctgccagaccgaagcgataagagcaagcggaggactaagacagtgaag
aagagtggagagccaaagtggaaccagacgtttgtgtactcccacatccaccgcagagac
tttcgccaacacatgctagagctgaccatgtgggaccagcctcgcttacctgacgagaat
agcatgttcatgggagagatcctaatagagctggagacagccccgttggatgacaagcct
cactggtacaagctgcagacccacgacgtgtcgtctatccccctgccctggccatcccct
tacatgccccgcagaaacacagacacacccagcaagaagctgcagcgttctcagcgtgtt
aaagagcctgaatacgatgacactggacctatgtctaaagctgccgagaggggatcgcgg
gagagggggaggcagcaaaaggatccccacgccaccactctggaggtgccagagcagaag
aggacaccccagcatcgctctcgatctgtctctcctcacagagaggaacagggcaggggg
cgatcacgacccgccaatgtccccacccagaggagtttggatgatgagatccaccatagt
aggaggtctcgttctcccacccgctactacgactctaccagaggacactaccaggagcag
gactatgtagatgacagtgaggtcatcctgatccaccagtcaatgcgaggcaaaagtgca
gaatgcctacacactgaaagttccacactgcctgcatgtctaaagactggctcgatggtg
cgttccagtgttgtcacggcaatacgcagctctttcacacaacgcgttctcaggtttaca
gacgagatcaccgttagtgatctacatacctctctggacagggttaagactaggagtgct
agcaccaactgtctgaacccagaaaggaaccatagtgttccttcaccagatccccaaagc
tgctcccagtctctaccccgcagacgccccgccagccccaggattctaatccaacacgcc
tccccagaagacgacagcaaatggatgatggaacctctagtacctagacaggagacagtt
aaccacctcagtgcaaagaagaggcaaactcggagcctggactcatccacctgtcacact
ctgggcaagaagctccctgacaacgacaggggccacctccaaggtggcgcgtctctgtcc
tcctcagtgatgtcctcgtcagcagctcgcagggtcagacaactcccacaggtcccagac
aagagcagcagccccgtagagcaagccctagcggcagaggagcgtgttcgtcagctccag
atgaaggtgcagcagagggactcctataggagttctgctgctccgtccacttctagcagg
gacgtggagagggtgctcaagagcaaacgcgaggtcagtcacctgtcacttgagctgtat
aaggaccagaggagaaccagctgtgagaacgtatcccgcaagtcttcagaaagtgatgtc
agcgacgtgtcagccatctctcgcaccagcagtgcctcccgcatcagtagtaccagctac
atatccatccagtcagagagaccccggggacgcttcaacaaggcgatgcgtgcgtcaggc
cgcagcatgttgaagagcaccagtgtgagtggtgagatctatggcattgagcacacggac
ggcagccaatcagatacagcattgggcgggggcaagaagcggcgctccagcctcagccaa
cgggtggtggccattgtaggcctgccctccagacgcagctgcagcacctcacagctcacc
tcccagaaagcagtggtggtggatactaaaaagaagggcaaaaaaaagaacaaaattcag
atccagcggagtacagaggtgggcatggctgtagagtacccacgctctgccatgaaccgc
caggccagcagagactccactgacgggagcatgaacagctacagctctgaggggaatcta
atcttctcggggatgaggctgggggttgacagtcagttcagtgacttcctggatggcctt
ggccccgcccaactggtgggccggcaaacattagccacacccgccatgggagatgttcag
atcggaatgatggacaaaaaaggccagctagaggtggaggtgattagagcacgtggcctt
acccccaaaccagggtccaaatcactcccagcaccctatgtcaaggcctacctgctggat
aacggagcctgtaaagccaaaaagaaaaccaagattgcacgtaaaaccctggagcccctc
taccagcaggccctgctgtttgaggaaagcccacaggggaaagtcctccaggtaatagtc
tggggcgactacgggcgactggatcacaaatgcttcatgggagttgcacagatcctattg
gaggagctggacctctccagcacagtgattggctggtacaaattgtttcctccttcctca
ttggtggaccctaccttagcctcgcttacgcggcgggcatcccagacatccctggacagc
tcaggaccagctggtatgcgctcttag
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integrated database retrieval system
