Oncorhynchus tshawytscha (Chinook salmon): 112253591
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Entry
112253591 CDS
T05605
Name
(RefSeq) oocyte zinc finger protein XlCOF6
KO
K09228
KRAB domain-containing zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112253591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112253591
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112253591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_11
BolA
zf-C2H2_3rep
zf-C2H2_8
zf-LYAR
zf-met
zf-C2HE
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
112253591
NCBI-ProteinID:
XP_024281289
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All DBs
Position
LG01:complement(55790979..55794467)
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AA seq
766 aa
AA seq
DB search
MSRLKDQLATVMRLLVNAAVVEISKLLDECTSQNVYTESQRQCTGPGTELSATMKRLCKE
AMQKIISLIDEDTASLRLQVSVCQRDNQVLKENLQVMDGDLRSTGGLGEVDAEDRKTQGK
DLTKFVRLSEVNSGTSSETEEECAEWITLKEGTLQQDTQTGHTHEHTDGESRTEDGEDAT
IEHNLEEEITTPLSPAKAQDDQDLEPAVPTDISNDAKMAAPTVRQMRLRAVRRTQGQKSV
KGDKCLSCVQCGKAFSKLSNLKAHQVVHTGERPFKCTHCGKGFTAKCSLKVHHVIVHNRE
KRFKCTYCGKIFGTQSQLKEHQVVFKGEKEKVLRCTLCAKAFPAKCSLKAHRIAVHRGEK
RFKCSQCGKVFARQRDMIVHQGVHTGERPFKCTACGKSFTARRSLNVHVLTVHKGERPFS
CDICGNRFSQRSGLKAHRRTHTGEKPYMCDQCGKGFSLKSALNTHHVVHTGEKAFSCEIC
GKCFSLAPNLRRHQQTHSGVKAFTCDICQKSFTQASHLKVHQRIHTGEKTFVCDVCGKSF
NQKSSLMIHQKIHSGDKPYDCLECGKCYRSANYLKRHQVTHTEKKTHSCEECGKNFHTAT
NLKTHRRVHTGKKTFTCDICEQGYSSLSYYNAHRLIHTEGKPFSCTMCEKQFAKQRFLNL
HLRTHTGERPHTCDLCGKSFSFAQNLVRHKRVHTGEKPFLCILCGKTFSQANNLKAHQQV
HTGEKPYNCSKCRKSFSCMRNLKEHKCIEVQEQIVEVTVGRLSQVL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtttaaaggatcaactggccaccgtcatgaggcttttagtaaatgcagccgtg
gtggaaataagtaaattgttggacgagtgcacgagtcaaaacgtttacaccgagtcacag
aggcagtgcactggccctgggactgagctgtctgccaccatgaagagattgtgcaaagag
gccatgcaaaaaatcattagtctcatagatgaggatacagcttctctgcgtctgcaagtg
tctgtgtgtcagagagataatcaggttctgaaggagaatctccaggtgatggatggggac
ctgaggtcgactggagggcttggagaggtggatgcagaggacaggaagacccaaggaaaa
gacctgactaaatttgtgcgcttgtctgaagtcaacagtggcacgtcttcagagacggag
gaggaatgtgctgaatggatcacgttgaaggagggtaccctgcaacaggacacccagaca
ggacacacacatgagcacacagatggagaatccaggacagaggatggggaggatgctact
attgaacacaacttagaggaggagattactacaccactctcaccagcaaaggcccaagat
gaccaagacttagagcctgctgtgcccacagacatatccaatgatgctaagatggcggct
cccacagtacgtcaaatgagactgcgtgcagtgagacgcacccagggccagaaatctgtc
aaaggagacaaatgtttaagctgtgtacagtgtgggaaggcttttagtaaactaagtaac
ctgaaagcccaccaggttgttcacacaggtgagaggccatttaagtgtacgcattgtggg
aagggctttacagcaaagtgcagtctcaaagtacaccacgttatagtccacaacagggag
aagcgattcaagtgcacatactgcgggaagatatttggcacccagagccagcttaaagaa
caccaggtggttttcaaaggagagaaagagaaggtattaagatgtactttgtgtgctaag
gctttccctgccaaatgtagcctcaaagctcacagaatagctgtacacagaggagagaag
agattcaagtgctctcagtgtgggaaggtttttgccaggcagagagatatgatagtacac
cagggtgtacacacaggagaaagaccatttaagtgtacagcgtgtgggaagtcttttaca
gctagacgaagtttaaatgtacacgtgctgactgtacacaaaggagagcgacctttcagc
tgtgacatatgtggcaatagattcagccagagaagtggcctcaaggctcaccgaaggacc
cacaccggagagaagccctacatgtgtgaccaatgcggaaaaggcttcagcctgaaaagt
gcccttaatacccaccacgtagttcacactggtgagaaagcatttagctgtgagatctgt
ggcaaatgttttagtttagcgcctaacctccgcagacaccagcagactcactctggtgtt
aaagcgttcacctgtgacatatgccagaagagtttcactcaagctagtcatctcaaagtc
caccagcgcattcacacaggtgagaaaacgtttgtatgtgacgtatgtggaaagagcttc
aaccaaaagagttcgctgatgatccaccagaagatacacagtggggacaaaccctatgac
tgcttagagtgtggaaaatgctaccggtctgcaaactatctgaaaaggcaccaggtgaca
cacacagagaaaaaaactcactcttgtgaagaatgcggaaagaatttccacaccgctacc
aatctcaaaactcatcgtcgggtccacacaggcaagaagacgtttacctgtgatatatgt
gaacaagggtacagttccctgagttactataacgctcaccggctcattcacactgagggg
aaaccattcagctgcaccatgtgtgagaagcagttcgccaaacagcgtttcctcaatctt
cacctacgcactcacactggagagaggccacatacctgtgacctgtgtgggaagagcttc
agttttgcacagaaccttgttcgccacaaacgcgtgcacactggggagaaaccgtttctc
tgcattttgtgtgggaagactttcagccaagcgaacaatctcaaggctcaccagcaagtg
cacactggggaaaaaccatacaactgctccaaatgcaggaagagcttctcctgtatgaga
aatctgaaggaacacaagtgtattgaagttcaagaacaaatagtggaagtgactgttggg
agactctcacaagtactgtaa
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