Oncorhynchus tshawytscha (Chinook salmon): 112253622
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Entry
112253622 CDS
T05605
Name
(RefSeq) ninein-like protein isoform X1
KO
K16477
ninein-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112253622
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
112253622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF5580_M
ATG14
Motif
Other DBs
NCBI-GeneID:
112253622
NCBI-ProteinID:
XP_024281294
LinkDB
All DBs
Position
LG01:complement(55899731..55941242)
Genome browser
AA seq
1786 aa
AA seq
DB search
MDEEEQNRYVAQLKEEFHSCDTTGTGYLDKEELSALCHKLSLDAHLPLLLDTLLGPHHYA
RVNFEEFKEGFVAVLSRSLDFSTSEEESSYLEPVVPEEVKPKFVKGTKRYGRRSQPDRPD
SELTADSEGSRPFRTEQKESSPAGVRRIKLRRSTSLESVESLKSDEDTGSHKDTIHQTFE
AQGQQKRWKRDSSESTLHSPGPRAEVTDSRMRAVWEELGVGVGGFLNRQELSLVCDHLGL
QDLNPEELDALFRKLDTDLDGRVSLREFQKGLFREGSVPAPTSSSTPIRANPQHSLQQAF
EERTVRSTSPSLLSATVGQRLLTRLDEGSGCTSPERVIALWTGEGIRNSRDILQTLDFPL
EERVSLSELTLALDNELLVSGNGIHQAALISYKNEIQFLQVLADQACRERDKVKADLEWA
DRRNLQLVSEVDDRHAAIESLNETKIKGLEQEFRDRLTALRSESAQENEVLLQQVEHERA
KLKEEVEVLRAHDASLHEEVCNATQEKDRLEEEGSVLKGKLSETERTISKLQRDLDQLLL
DKFGSLDPNNTGLLNQEERFSEIIKEFELQCRALRDRNDELNSEVDFLKSHGMGRRSRQE
RDTSTHAWSSRRSLTESDSDDPEMKRGISPMVRKKLQVANKNGLGSLESLPGLVVSIETE
MAMGQLKERHSQEVQDLKIELETKVNFYERSLELMRQNMEVERKDISQGFKVEISDLEEQ
KAQVEEQVKRLREEVEKLQAQLQHSSRGLGGPGWGTDQERRAQREQAELEQNYAREISNL
VQRLTSEKDQLEAELKLRMDQEVLLVRKEAEQQVSQMKTQQAQHSLMHQLRCECLQEPEQ
ERHRERLHSTERVSEEQARICSRAAVERKRLEEEHQEEVLQLKEQTATLQKQADLASESH
IQHSQSEAKLEETCSQCSQMQARLEVVCAQLEESTVSLEFHETLTERLTSKQQAVEELGL
VRDRERALFSEVSQLSEELRILRSESETLLQDKEMLAENCSHLSSAFIQQQVQLRAKEED
TATLRGELETARVALRNEVEQRSRQSAEMVSLKTDRAKLKEELQKRTTTIDRLQSDLDCV
TEELDQWKRAEENLQEALRQERTKVTQIQSTLDLERGETDSLSQENAHYIRLADQLSNQI
VEMETESSKLRDHIQELKAQLSETFNLVSNLRAQLEAKSTEVHHLVSDMKQMAGLLEMAE
ALSNKHYREKELRNTQLETKESELHSLRGKAGRIVQLQQVLLSSRAEVHELEEAFEKEKG
RMKEQLVEMEKLVMALEMVMDPASPHRSQLDKVNCENSALKDRLAMLQQDVQRLEVEIIQ
KKKKLDKVEQEHEKNREEQERHCKENAEYREELLDMSARNLQLSNENAELSSRLRGDQGA
VQMLTERLAQVSQEQEEGAATARQLQETSTQQERERFHLQAAWQHDKELLERELNTTKEK
LQRLSEVESSLTSLTLKHQWLEQDKERLLREAEERTHKVEMLQDSLRSVDSQTELLRSKL
QAVGQVKTDQDQEVANHQRMLQEAQDKVTELEASMGRLSREKEQLRLAQKHHEEEATMAL
QEECQSLRLRNQELLHEVCQLQGQDFEVQSLTQECLTMKSKQAQLEAAWAEAQDQALRAE
TALTLAQVQHAQQLQQFREQAGLGSREQLAHLQAQLAEERRRGQQLEETLRTQAQQASAQ
MGLQQEQYEKVMGDMQERMEEVETKLRSVRMILQEKVNQLKEQLAKNAKSDIMLKDLYVE
NSQLMKALQVTEQRQKSAEKKTFILEEKITALNKLLRKIAPASLSA
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaagagcagaaccgctatgtggcccagctgaaggaggagtttcacagctgt
gacaccacaggcactggttacctggacaaggaagagttgtcagccctttgccacaagcta
tccctggatgctcaccttcccctactgttggacaccttgctaggaccacaccactatgct
cgggtgaattttgaggagttcaaagaaggctttgtagctgtgctatcacgctctctggac
ttcagcacctctgaagaggagagcagctacctggagccagttgttcctgaggaagtgaag
cccaagtttgtgaagggaacgaagcgctacggccggcggtcccagccggacaggcccgac
tctgagctcacagctgactcggagggctctcgtcctttcaggacggagcagaaggagtcc
tctcccgctggcgtgaggaggataaaactcagacgctctacttctctagagagtgtggag
agtctcaagtcggatgaggacaccggaagccataaggacaccatccatcagacttttgag
gcacaagggcagcagaagcgatggaagcgggacagttcggagagcacgctccactcccct
gggccgcgggccgaggtgacagacagccggatgagggcggtgtgggaggagctgggggta
ggagtaggtggctttctgaacaggcaggagctgtccctggtctgtgaccaccttggcctg
caggacctgaatccagaggagttggacgccctcttcagaaagttggacactgacctggat
gggagggtcagcctcagggagttccagaagggtctcttcagagaggggagtgtcccagct
cccacctcttcctccacccccatacgtgccaacccccagcactcactccagcaggccttc
gaggagcggacggtgcgctccacctctccctctctcctgtctgccaccgtgggtcagagg
ctgctgaccaggctggacgaagggtcgggttgcaccagtccagagagggtcatcgccctc
tggaccggcgagggcatacggaacagcagggacatcctacagactctggacttccccctg
gaagagcgggtcagtctgtcggagctcaccctcgccctggacaatgagctgctggtcagc
ggcaacggcatccaccaggcagccctcatctcctacaagaacgagatccagttcctccag
gtcctagcagaccaggcatgtcgggagagggacaaggtcaaggccgacctggagtgggcc
gacaggaggaacctccagctggtcagcgaggtggatgacagacacgccgccattgagtca
ctgaatgaaaccaaaatcaagggtctggagcaggagttccgggataggcttacggccctg
cgtagtgaatctgcgcaggagaacgaggtcctgctgcagcaggtggagcatgagcgggcc
aagctcaaagaggaagtggaggtcctacgggcacacgatgccagtctgcacgaggaagtc
tgcaatgccacccaggagaaagaccgtttggaggaggagggcagtgttctgaaggggaag
ctgtcagagacagagagaaccatctctaaactgcagagagacctggaccagcttctacta
gacaagtttgggagcctggatccgaacaacacaggactgcttaaccaggaggagcgcttc
tctgagatcatcaaggagttcgagctgcaatgccgggcgctgcgggaccggaatgacgag
ttgaactcggaggtggattttttaaagagtcatgggatggggaggagatccagacaggaa
agggacacatccacacacgcctggtccagccgacgatcactgactgagtcagactcagat
gacccggagatgaagagaggcatatctcccatggtgaggaaaaagcttcaagtggccaat
aagaatggcctgggttctctggagagtctgccaggtcttgttgtgagcattgagactgag
atggccatgggacagcttaaggagaggcacagccaagaggtgcaggacctgaagattgag
ttagagaccaaggtgaacttctacgagcgcagcctggagctgatgcggcagaacatggag
gtggagaggaaagacatctctcagggcttcaaggtggagatcagtgatctggaggagcag
aaggcccaggtggaggagcaggttaagaggctcagggaggaagtggagaagctgcaggcc
cagctacagcacagctccaggggcctgggagggccaggctggggcactgaccaggagaga
agggcccagcgcgaacaggcagagctggagcagaactatgcccgggagatcagtaacctg
gtccagaggctgacctcagagaaggaccagctggaggctgagctgaagctcagaatggac
caggaagtgctgctcgtaaggaaagaggcagagcagcaggtgtctcagatgaagacacag
caggcccagcacagcctcatgcaccagctacgctgtgagtgcctgcaggaaccggagcag
gagaggcacagggagaggctccacagcacagagagggtgagtgaggagcaggccaggatc
tgcagcagggccgctgtggaaaggaagaggctggaggaggagcatcaagaggaggttctg
cagctgaaggagcagacagccactctgcaaaagcaggctgatctggcctctgagtcacat
atacagcacagtcagtcagaggctaaactggaagagacttgcagtcagtgtagtcaaatg
caggccagactggaggtggtttgtgcccagctagaggaaagcactgtgtctctggaattt
catgagactttgaccgagcgcctgacctctaaacagcaagctgtagaggagctggggttg
gtgagggatagagagagggcgctcttcagtgaggtgtctcagctaagcgaggagctgcgt
attctacggtctgaatctgagacacttcttcaggacaaagaaatgttggcagagaattgc
agccatctgtccagtgctttcatacaacagcaagttcaactgagggccaaagaggaagac
acggcgaccctgaggggggagttggagacggcacgggtggctctgagaaacgaagttgag
caacgctcaaggcagtctgctgagatggtctccctgaagacggaccgagcaaagctgaag
gaggagctgcagaaacgcacgacaaccattgaccgtctgcagtcagatcttgactgtgtc
actgaggagttagaccaatggaaaagggcagaggagaatctacaggaagccttgaggcag
gaacgaaccaaggtcacacagatccaatccaccctggacctggagaggggagagacggac
agtctgagccaggagaacgcccactacatccgcctggctgaccaactctccaaccagatc
gtagaaatggaaacggaatcatccaaactccgagaccacatccaagagctgaaagcccaa
ctgagtgaaacgttcaacctggtttctaatttaagggcccagctagaggccaaatccaca
gaggtacaccaccttgtgtcagatatgaagcagatggcaggtctgttagagatggcagaa
gccctgtctaataagcactatagggaaaaggagctgcggaacacccagctggagaccaag
gagagtgagctgcactccctcagaggaaaagctggcagaattgtccagctccagcaggtg
ctgctctcctctcgggcagaggtccacgagttggaggaggcctttgagaaggagaaaggc
aggatgaaggagcagctggtggagatggagaagctggtcatggctctggagatggtgatg
gaccctgccagtccacacagatctcagctagacaaggtcaactgtgagaacagcgcactg
aaggacagattggccatgttacagcaggatgtccagagacttgaggtggagattatccag
aagaaaaagaaactggacaaagtggagcaggaacatgagaagaacagggaggagcaggag
aggcattgcaaagagaacgccgaataccgtgaggagctcctggacatgagcgcccggaac
ttgcagctgagcaacgaaaacgctgagttgagctcccgtctccgtggcgaccagggggca
gtccagatgctgacagagcggctggcgcaggtgtcccaggagcaggaggagggggcggcc
acagccaggcagctccaggagacctccacccagcaggagagggagaggttccacctgcag
gcagcctggcagcatgacaaggagctgctggagagagagctcaacaccaccaaggaaaag
ctccaacgtttgtcagaggtggagtcctcgctgaccagcctgaccctgaagcaccagtgg
ctggagcaggataaggagaggctgctgagggaggcagaggagaggacccataaagttgag
atgctccaggattctcttcgctccgtggactcccagacagagctgcttcgttccaaactc
caggctgtgggtcaggtgaagactgatcaggaccaggaagttgccaaccaccagaggatg
ctgcaggaggcccaggacaaggtaacggagctggaggccagcatgggcaggctgagtagg
gagaaggaacagctgcgtctggcccagaaacatcatgaggaggaggccaccatggcccta
caggaggagtgccagagcctgcgccttcgaaaccaggagctgctccacgaggtgtgtcag
ctgcagggccaagacttcgaggtacagagtctgacccaggagtgcctaactatgaagagc
aaacaggcacaactggaggctgcttgggcggaggcacaggaccaggcactgcgggcagag
acagccttgaccctggcccaggtccagcatgcccagcagctgcagcagttcagggagcag
gcaggactggggtctagggagcagctggcacacctccaggcccagctagcagaggagcgg
cgcagggggcagcagctggaggagaccctccgcacacaggcccagcaagccagtgcccag
atgggcctgcagcaggagcaatatgaaaaggtgatgggggacatgcaggagaggatggag
gaggtggagaccaagctgaggagtgtgcgcatgattctgcaggagaaggtcaaccagctg
aaggagcagctggcgaagaatgccaagtcggacatcatgctgaaggacctgtatgtggag
aactcccagctgatgaaggcactgcaggtcactgagcagcgacagaagagtgctgagaaa
aagaccttcatcttagaggagaagattacagccctcaacaagctccttcgtaagatcgcc
cctgcctccctctcggcgtag
DBGET
integrated database retrieval system
