Oncorhynchus tshawytscha (Chinook salmon): 112253629
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Entry
112253629 CDS
T05605
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112253629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253629
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112253629
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Others
112253629
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
112253629
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
112253629
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112253629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
112253629
NCBI-ProteinID:
XP_042181032
LinkDB
All DBs
Position
LG08:4459668..4467108
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AA seq
434 aa
AA seq
DB search
MADAGNKESAPIGGDEFTNTELENNKNNTMVEEGSTLLRRMEISVAEAEKRTGKNTVNMQ
EIFTVYLIETRPIDAITEGHNPAPDSLWRRYSEFEILRNYLLVTYPFIVVPPLPEKRAEF
VWHKLSADNMDPDFVERRRVGLENFLLRVASHSVLSNDKILYHFLTEEHRWKEVVYETGF
QAKADSRIKALSATFRVKNPDKRFTEMKHYSDELQSLTSQLLRVRARVADRLYGVYKVHG
NYGRVFSEWSALEKEMGDGLQSAGHHMDAYAASVDDMLEEEEHYADQLKEYLFYAEALRA
VCRKHELTQYELETASSDLISKKQQREELATGMVRTFSFKGMTNKLFGQETPEQREAKLS
LLEEQIVQGEETVTEKTVECEEYVKGAWVDMQRFKEQKDRDLREALIGYAVMQISMCKKG
IQVWTNAKECFHKM
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctggaaataaagagtcagcgccgattggaggagatgaatttaccaacaca
gagttggagaataacaagaataacacgatggtggaggaaggatccactctgctgcggaga
atggagatcagtgtggccgaggcagagaaaagaactgggaaaaatacagtgaacatgcaa
gagatattcacagtgtacctcatagaaactcgacccatagatgcaataacagaaggccat
aacccagccccagactctctctggaggagatacagtgagtttgagatcctccggaactat
ttgttagtcacctatccatttatcgtggtgccgcctttgccagagaagagggcagagttt
gtttggcacaagctgtctgcagacaacatggacccagactttgtagagaggcgcagggtt
ggtctggagaactttctacttcgcgtggcctcccattcggttctgtccaatgacaaaatc
ctataccacttcctgactgaggaacacaggtggaaggaggtggtgtatgagacagggttc
caagccaaggcagactccaggattaaagctctgagcgcaactttcagggtgaagaaccct
gacaagcggttcacagagatgaaacactacagcgatgagcttcagtctctcacctcccag
ctgctcagagtcagagcaagagtagcagacaggctctacggcgtatacaaagtccatggg
aactacggaagagtattcagtgagtggagtgccttagagaaggagatgggagatggtcta
cagagtgcaggacaccatatggatgcctatgctgcctcagtagatgatatgttggaggaa
gaggagcactacgcagaccaactgaaggaataccttttctatgctgaagccttaagggct
gtgtgtaggaaacacgagctgacccagtatgagctggagacggcctcctcagacctcatc
tccaagaagcagcaacgggaggagctggccactgggatggtacggacgttctccttcaaa
ggaatgaccaacaagctgtttggtcaggagacaccagagcagagggaggctaaactcagc
ctactagaggagcagatcgtccagggagaggagacggtcacagagaaaacagtggagtgc
gaggagtatgtgaagggtgcgtgggtggacatgcagcgcttcaaggagcagaaggacagg
gatctgagggaggctctgattggctacgccgtcatgcagatcagcatgtgtaagaagggc
attcaagtgtggaccaatgctaaggaatgtttccacaagatgtaa
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