Oncorhynchus tshawytscha (Chinook salmon): 112253652
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Entry
112253652 CDS
T05605
Name
(RefSeq) Usher syndrome type-1G protein homolog isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112253652
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
USH complex and associated proteins
112253652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
SAM_1
Ank_5
SAM_2
Attacin_C
Motif
Other DBs
NCBI-GeneID:
112253652
NCBI-ProteinID:
XP_024281383
UniProt:
A0A8C8BWF1
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All DBs
Position
LG01:complement(81277528..81316241)
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AA seq
501 aa
AA seq
DB search
MNDKYHRAARDGYLDLLREATRKELNAPDEDGMTPTLWAAYHGNLDALRLIVGRGGDQDK
CDIWGNTPLHLAAANGHHNCLSFLVSFGANVWCLDNDYHTPLDMAATKSHMDCVRYLDSI
AAKQSALNPKLVSKLKDRAFRMAERRIKDCVKMQQKHHQRMERKFLKESVASDNSDAMSF
TSYNSSSTLNRKLPQFNTLTSNMPYSQATLHSTAKGRTKIKKKLEKKKQVDGTFKIYEDG
RKSVRSLSGLQLGQDVMFLKQGTYANSKDRSRLNIRDMFPHHGNNHDYHDDDHDDYDDDH
ADTISHISRAISDPGLHETAYSEISADSGRDSLFTRPGLGTMVFRRNYVSGGLFGIGARD
KGFAAVSEPVGRAPNVRLRGHLPRRQPSLDDAIEIGSIGSALSLQERHLQELPWEEADVG
LDEELEPENGPLETFLASQGLGEFMPIFRKEKIDLEALLLCSDQDLTSIHIPLGPRKKLL
EACKRRLDTLEEPEGIEDTDL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagtaccaccgggcggcccgggatggctacctggacctactcagagaggcc
actcggaaggagctgaatgcgcctgatgaagatggaatgacaccgactttatgggctgcg
taccacggcaaccttgacgcgctccggcttattgtgggaagaggaggtgaccaggacaag
tgtgatatctgggggaacactccgctccacctggccgccgccaacggccaccacaactgc
ctatccttcctggtgtcgttcggagccaacgtgtggtgcctggacaatgactaccacacg
cccctcgacatggccgccaccaagagccacatggactgtgtccggtacctggactccatc
gccgccaagcagtcggccctcaaccccaagctggtgagcaagctgaaagacagagcattc
cgcatggcggagaggaggataaaggactgtgtgaagatgcagcagaaacaccaccagcgg
atggagaggaagttcttgaaggagagtgtagcgtcggataactcagatgccatgagcttc
actagttataacagcagcagcacgctaaaccgcaaacttcctcagttcaacactctcact
tccaatatgccatactcacaggccactcttcactccacagccaagggtaggaccaagatt
aagaagaagctagagaagaagaaacaggtggacggcaccttcaagatctacgaggatggg
aggaagagtgtacgctcgctgtctggccttcagcttggccaggacgttatgttcctcaag
cagggcacctatgccaactccaaggatcgctcgcgtctcaacatccgggacatgttccct
caccacggcaacaaccacgattaccatgacgatgaccatgacgattatgatgacgaccat
gcggacaccatctcccacatttcccgtgccataagcgacccgggccttcacgagacagcc
tactctgagatcagcgccgactcaggccgcgactctttgttcacccggccaggtctcgga
accatggtgttccgacggaactacgtatccggcggtctcttcgggatcggagcccgggac
aagggttttgcggctgtcagtgaacctgtaggccgggcccctaacgttcgtctccgtggc
cacctcccacgtcgccagcccagcctggacgatgcaatagagataggcagcatcggcagt
gccctgagcctccaggagaggcacctacaggagctgccctgggaggaggctgatgtgggc
ctggacgaggagctggagcctgaaaacggcccactggagaccttcctggcctcccagggc
ctgggggagttcatgcccatcttcaggaaggagaaaatcgacctggaggccctactgctc
tgctcggaccaggacctgacctccatacacatccccctgggacccaggaaaaagctacta
gaggcctgtaagagacggttggacaccctggaggaaccagagggcatcgaggacactgat
ctctga
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