KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112253658
Entry
112253658         CDS       T05605                                 
Name
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    112253658
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112253658
Enzymes [BR:otw01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     112253658
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     112253658
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 112253658
NCBI-ProteinID: XP_042179717
LinkDB
Position
LG07:complement(1435077..1528251)
AA seq 1050 aa
MTSHSHQEGLLGKEQQLDVLKTSALNHIPTVDINSALPLRLPPAAIPMDLRIDQHHHQQQ
LSMSPSAAQASAAQAREQQLQQELLSLKQKQQIQRQHLIAEFQRQHEQLNRQHEAQLQEH
VKHQQELLALKHQQELLEHQRKMEKHRLEQELEKHQREQKLLLLKNKERGQESAVASTEV
KMRLQEFVLNKKKALAQRSLNHGGLPNDPRYWYGKTQHTSLDQSSPPQTGMGTYNHPVLG
IYNARDDFPLRKTASEPNLKLRSRLKQKVSERRSSPLLRRKDSPITTAKKRSLDMADSAC
NSAPGSGPSSPNNNSISNIPNENGVTVSNSIDVSLAQRLCGGELSQLSLYTSPSLPNITL
GLPATATSASNVTSAQQDGGQHSALSLSPPYLGGAPLATYLADGGGAGGHGPLLQHLVLL
EQTGAHGPLLAGVDALQSPAIHMLRGQHRPLGRTQSAPLPQQNAQAQALQQLVVQQQHQQ
FLEKHKQQFQQLHINKLMGKPSEPTGTRQHQSHPEETEEELREHQALSPQDGGFPCGFAI
KQEPPDPQESQEEDMQQELLFRQQAMLLEQQRIHQLRNYQASMEAAGLSITFPGHRPLSR
AQSSPASASSFPISVPPPEPPTKPRFTTGLVYDSLMQKHQCMCGNTHTHPEHAGRIQSIW
SRLQETGLRGQCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDCSVTPMLVRLPCG
GVGVDSDTIWNEVHSSTAVRLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGF
CYFNSVAIAARLLQQRLNVCKILIVDWDVHHGNGTQQAFYDDPNVLYLSLHRYDDGNFFP
GSGAPDEVGSGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRSVVMPIANEFSPDVVLVSSG
FDAVQGHPPPLGGYTLTSKCFGYLTRQLMTLAEGRVVLALEGGHDLMAICDASEACVSAL
LGNQLDPLPQTLLEQRPNQNAVCSIEKVIETHSKYWRSMQRDSPRLGLSVLEAQRGDSEE
AETVSAMASLSVANKQSRSEEEPMEEEAPL
NT seq 3153 nt   +upstreamnt  +downstreamnt
atgacatcacacagtcaccaagaaggactcctgggcaaggagcagcagctggatgtcctg
aagacgtctgccctcaaccacatccccacagtggacattaactctgccctgcccctgcgt
ctgcccccggctgccatccccatggacctacgcattgaccagcaccatcaccagcagcag
ctgtccatgtctccttctgcagcccaggcgtctgcagcccaggccagagagcagcagctg
cagcaggagctcctgtccctgaaacagaaacaacagattcagagacagcacctcatcgct
gagttccagaggcaacatgagcagctcaaccgccagcatgaagcccagctacaggaacat
gttaagcaccagcaggagctcttggccctgaaacatcagcaggagctgttggagcaccag
aggaagatggagaagcaccgtctggagcaggaactggagaaacaccagagagaacagaaa
ctactgctgctgaagaacaaggagagaggacaggagagtgcagtggccagtacggaggtg
aagatgcgactgcaggagtttgtgctgaacaagaagaaggctctggcccagaggagtctc
aaccacggggggttgcccaacgacccccgctactggtacgggaaaactcagcacacttcc
ctggaccagagctctcctcctcagactggtatgggtacctacaaccaccctgtcctgggc
atctacaacgctagagacgacttccccctccgcaagacagcctctgagcccaacctgaag
ctacgttctcgtctgaagcagaaggtgagcgagcgacggagcagccccctactgaggcgt
aaagacagcccgatcacaaccgccaagaaacgctcactggatatggcagattcagcgtgt
aacagcgctcctggatccggccccagctctcctaacaacaacagcatcagcaacatcccc
aatgagaacggcgtcactgtctccaacagcattgatgtgtccctggctcagcggttgtgt
ggtggtgaactcagccagctgtctctgtacacgtccccctccctccccaacatcacccta
ggtctgcccgccacggccacctctgcttccaatgtgacctcagcccagcaggatgggggt
caacattcggccctctccctcagccccccctacctaggcggtgcccccctagccacctac
ctggctgacggagggggcgcaggggggcacggcccactactgcagcacttggtcctgctg
gaacagactggcgcgcacgggcccctactggcaggtgtggacgccctccagtctcccgcc
atccacatgctgcgtgggcagcaccgtcccctgggtcggacccagtcggccccactgccc
cagcagaacgcccaggcccaggccctgcagcagctggtggtccaacagcaacaccaacag
ttcctggagaaacacaaacagcagttccagcagctacacatcaacaagttgatgggcaag
cccagtgagcccacggggacccggcagcaccagagtcacccggaggagaccgaggaagag
ctgagggagcaccaggccctctctccccaggacggcggctttccgtgtgggttcgccatc
aaacaagagcccccagacccccaagagagccaggaggaggacatgcagcaggaactgctg
ttcagacagcaggccatgttgttggagcagcagagaatccaccagctgagaaactatcag
gcttccatggaggcagccggtctgtcaatcaccttcccaggtcaccgccccctctccagg
gcccaatcgtctccggcctccgcgtcctccttccccatctctgtcccgcctcctgagcct
cccaccaaacctcgcttcaccacagggttggtgtatgactctctgatgcaaaagcaccag
tgtatgtgcgggaacacacacacccatccggagcacgccgggcgcatccagagcatctgg
tccagactgcaggagacaggacttaggggacagtgtgagtgtatccgtggtaggaaggcc
actctggaggagctccagacagtccactctgaagcccacgtcctgctgtatggaaccaac
cccctccgacagaaactagactgttcagtcacgcccatgttggtcagattaccatgtgga
ggagtgggggtggacagtgacaccatctggaacgaggtccattcctctactgcagttcgt
ctggctgtgggttctgtggtggagctggtgttcaaagtggccactggtgaactgaagaac
ggctttgctgtggttcgaccccctggacaccatgcagaagagagcactcccatgggcttc
tgctactttaactcggtagccatcgcagcccggctgctccaacagagactcaacgtctgc
aagatccttatagtagactgggatgttcaccatggcaacgggacccagcaggcattttac
gacgaccccaacgtgctgtacctgtctctccatcgatacgacgatggaaacttcttccct
ggcagcggagcacccgacgaggtgggcagtggtccaggagtaggttttaacgttaacatg
gccttcaccggggggctggagccacctatgggagatgcagagtacctggcagccttcagg
tctgtggtgatgcccatagctaatgaattttctcctgacgtggtgctggtgtcctcaggc
ttcgacgccgtccagggtcaccctcctcccctaggcggttacaccctcacctccaaatgt
tttgggtacctgacgcgtcagctgatgaccctggcggagggtcgtgtggtgctggcattg
gagggaggtcacgacctcatggccatctgtgacgcctccgaggcctgcgtctccgctctg
ctgggcaaccagcttgatcctctccctcagacgcttctggagcagagacccaaccagaat
gctgtgtgctccatagagaaggttatagaaacacacagcaagtactggcgctccatgcag
cgtgactcccccaggctgggcctgtctgtgctggaggctcagagaggagactcggaggag
gctgagaccgtcagcgccatggcctctctctctgtggccaacaaacagagcaggtcggag
gaggaacccatggaggaggaagcaccattatag

DBGET integrated database retrieval system