KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112253695
Entry
112253695         CDS       T05605                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4 isoform X1
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010  ABC transporters
otw04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    112253695
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    112253695
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:otw02000]
    112253695
Transporters [BR:otw02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    112253695
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 AAA_21 AAA_29 nSTAND1 AAA_22 MMR_HSR1 RsgA_GTPase AAA_23 Dynamin_N DUF87 AAA_7 cobW T2SSE ABC_ATPase
Other DBs
NCBI-GeneID: 112253695
NCBI-ProteinID: XP_042179883
LinkDB
Position
LG07:4687247..4731438
AA seq 1317 aa
MEQLKKDVKFNPSTTANFFSRVFFCWVTPLFSIGNKRRLEEDDMYQVLPDDASQGLGEEL
QRHWDKEVRMAAKELRMPKLTKAIVKCYGKPYAVLGIFSFTVEVIKVIQPVFLGKLIQYF
EKYDPDDMDALYEAFGYAAGISLSTVALTVLQMHYYYHVQRTGMKIRVAMCHMIYKKALC
LSSAAMGKTTTGQMVNLLSNDVNKFDEVTNNLHYLWIAPLQAVVVIILLWYEIGLSCLAG
VAVLLFLLPLQTMFGKLFGSLRSKTAALTDNRIRTMNEVVSGIRIIKMYAWEKPFSALVN
DVRREEISKIMSSSYLRGLNLASFFAASKIIVFITFAVYVLLGNTISASRVFVAVSLYGA
IKITVTLFFPQAIEKVFETIISIRRIKHFLLLEEIERPKMRFTPEEKKDASVEIKDLICY
WDKCLDTPSLQNLSLTVKSEQLVAVIGPVGSGKSSLLSAILGELPHDKGVLRVKGQLTYA
SQQPWVFPGTIRSNILFGKELHPQKYEKVLRACALQRDMELLPDGDLTVIGDRGATLSGG
QKARVNLARAVYQDADIYLLDDPLSAVDAEVGRHLFEQCICGILKNKPRILVTHQLQYLQ
AANQILVLKEGHVVGRGTYSELQHSGVDFTSLLKRDEEEPQTNNNHSVVKHAFSQNSISS
WNSVVSHTSSMHSVKDGAEQLSTVAEESRSEGNIGASLYFKYLNAGASILVMLCTVLLSL
IAEVAYVLQDWWLAYWAGEQEKLNINGTVIVQNGLNITQELDLGFYVGIYAGLTLASVIF
GFAKSLVMFNVLVKAAQSLHNRMFNSILRTPVRFFDINPIGRILNRFSKDISQLDFMLPN
TFVDFSQSILQNIGVVVVAASVMPWILIPVVPLLIIFLFLRRYFLQTSRDVKRLESTTRS
PVFSHLSSSLQGLWTIRAFGAEERFQNTFDAHQDLHSESWFLFLVTSRWFALRLDGICAA
FVTVTAFGCLFLRDGLEAGAVGLVLSYAVTLLGNFQWTIRQSAEMENMMTSVERVVEYTE
LESEAPWETQKRPPPEWPSKGLITFDRVSFSYSSDGPVVLKDMKAMLRPKEKVGIVGRTG
AGKSSLVSALFRLAEPEGRIYIDGVLTSEIGLHDLRQKMSIIPQDPVLFTGTMRKNLDPF
SQHTDEDLWNALQEVQLKSVVEELPNKMETVLAESGSNFSVGQRQLVCLARAVLRKNRIL
IIDEATANVDPRTDELIQKTIRDKFRECTVLTIAHRLNTIIDSDRILVLGAGMIQEFDKP
YVLLQNQESALYRIVQQTGKAEAASLLESAKQAYMNNGNSHDPKMANGVVVFFETAV
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggaacaactgaagaaagacgtgaaatttaatccatcaacaacagccaatttcttttca
cgggtgtttttctgttgggtaacccctttatttagtattggaaataagcggaggctagaa
gaagatgacatgtaccaagtgcttcctgatgatgcttctcagggcctgggagaggaacta
cagaggcattgggataaggaggttcgaatggctgccaaggagctgcggatgcccaaactc
accaaagccattgtgaagtgctatgggaaaccctacgcagtgctggggatctttagtttc
accgttgaggtgattaaggtgatccagccagtgttcttgggaaagctgatccagtacttt
gagaagtacgatcctgatgatatggacgcactgtatgaggcctttggctacgctgctggt
atctctctgtccaccgttgcactgaccgtcctccaaatgcattattactaccacgtccag
aggaccggcatgaagatacgagtggccatgtgtcacatgatctacaagaaggccctgtgt
ctcagcagcgcggcgatgggaaaaacaaccacaggacaaatggtgaacctgctatccaac
gatgtcaacaagtttgatgaggtgaccaacaatctgcactacctctggatagcacctctg
caggctgtggtggttatcatactcctgtggtatgagattggcctgtcgtgcctggcaggc
gtggctgtccttttgttcctcctgccactacagaccatgtttggaaagctcttcggctcc
ctcaggagtaaaaccgctgccttgactgacaataggatacgcaccatgaatgaagtggtg
tctggaatcaggatcatcaaaatgtatgcctgggagaagcccttctcagcactggtcaat
gatgtcagaagggaagagatctccaagatcatgtcaagctcctacctgcgaggtctcaac
ctggcctccttctttgcggccagtaagatcatagtcttcatcaccttcgctgtctacgtc
ctcctggggaacaccatctcagccagccgggtgtttgtggcagtgtctctatatggtgcc
atcaagatcacagtgaccctcttcttcccacaggccatagagaaggtgttcgagaccatc
atcagtatccgcaggatcaagcatttccttctgttggaggagattgagagacccaaaatg
agatttaccccggaggaaaagaaagacgcctctgttgagatcaaggacttaatttgctac
tgggacaagtgtctggacaccccatctctccagaacctgtcactcacagtgaagtcggag
cagctcgttgctgtcattggacctgtggggtctggaaagtcctctctgctcagcgccatc
ctgggggagctgcctcacgacaagggggtgttgagggtcaaaggtcagctgacctacgcc
tcccagcagccctgggtgttccctggaaccatccgcagcaacatcctgtttggcaaagag
ctccatcctcaaaagtatgagaaggtcctgagagcctgcgccctccagagggacatggag
ctgctgccagacggggacctgacagtgataggggacagaggagccaccctcagtggggga
cagaaagctagagtgaacctggcccgggctgtgtaccaggatgctgatatctacctgctg
gacgaccctctaagtgctgtggatgctgaggtcgggagacacctgtttgaacagtgtatc
tgtggtattctgaagaataagccccgcatcctggtgacccaccagttgcagtacctccaa
gcagccaaccagatcctcgtcctcaaggagggtcacgtggtggggagggggacatactcc
gagctgcagcactctggggttgacttcacctccctgctgaagagggacgaggaggagcca
caaaccaacaacaatcactcagtggtcaaacacgccttttcccagaactcaatttcctcc
tggaactcagtggtctcccacacctcctccatgcactctgttaaagatggagctgaacag
ctttcgacagtagcagaggagagccgatcggaaggcaacatcggtgccagcctctacttc
aagtacttaaatgcaggagccagcatactggttatgctgtgcacagtcctcctcagtctc
atcgcggaggtagcgtacgttcttcaggactggtggctggcctattgggcaggagagcag
gagaaactcaatattaacggcactgtgattgtccaaaatggcctcaacatcactcaagaa
ttggacctcggtttctatgtgggcatttatgcaggtttgactctggcctcggtcatcttt
ggctttgccaagagtctggtgatgttcaatgtgctggtgaaagctgctcagtctctgcac
aaccgcatgttcaactctatcctccggacacctgtacgcttctttgacatcaacccaatt
ggaagaattctcaacaggttctccaaggacatcagccagctggatttcatgttacctaat
acctttgttgacttcagtcagtcgatcctgcagaatatcggcgtagtggtggtggcagcc
tccgttatgccctggatcctcatccctgtggttcctcttctcatcatattcctgttcctg
agacgctacttcctgcagacgtcacgggacgtcaaacgcctggagtccaccactcggagt
cctgtcttctcccacctgtcatcgtccctccaaggtctgtggacgatccgagccttcgga
gccgaggagagattccagaacacctttgacgctcatcaggatctgcactcagaatcttgg
ttcctgttcctggtcacctctcgatggttcgctctccgactggatggaatctgcgcagcc
tttgtcactgtcactgcctttggctgcctcttcctcagagatgggctggaggcgggagct
gtgggtttggtgttgtcctacgcagtcacccttcttgggaacttccaatggaccattcgt
cagagtgcggagatggagaacatgatgacgtcagtggagagggtggtggagtacacagag
ctggagagtgaagcaccctgggaaacccagaagcgtcctcctcctgagtggccgagcaaa
ggcctcatcacctttgaccgagtcagcttctcatacagctcagacggacctgtggtcctg
aaggacatgaaggccatgttgaggcccaaagagaaggttggcatcgtgggcaggacgggt
gcggggaaaagctccctggtatcggcgctcttccgcctggcagagccagagggcaggatc
tacattgacggagttctgacctcagagatcggcctccatgacctgcgccagaagatgtcc
atcatacctcaggacccagtgcttttcaccggcaccatgaggaagaacctggaccctttt
agccagcacacagacgaggacctgtggaacgctctccaagaggtccagctgaagtctgta
gtggaggagctgcccaataagatggagacggttctggccgagtcgggctccaacttcagt
gtgggtcagaggcagctggtctgtctggcccgggctgttctgaggaagaaccgcatcctc
atcatagacgaggccacagccaacgtggaccccagaacagacgagctgatccagaagacg
atacgagacaaattcagggagtgcaccgttctcaccatcgcccaccgcctcaacaccatc
atagacagcgaccgcattctggtgctaggcgctggtatgatccaggagtttgacaagccg
tacgtccttcttcagaaccaggagagtgctctctacaggatagtccagcagacgggcaag
gctgaggcagcttccctactggaatcagccaaacaggcgtatatgaacaacggcaacagc
catgatccaaaaatggccaacggagtggtggtcttctttgagactgctgtgtga

DBGET integrated database retrieval system