Oncorhynchus tshawytscha (Chinook salmon): 112253707
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Entry
112253707 CDS
T05605
Name
(RefSeq) oocyte zinc finger protein XlCOF6-like
KO
K09228
KRAB domain-containing zinc finger protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112253707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112253707
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112253707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_11
zf-C2H2_8
Zn-ribbon_8
zf_C2H2_ZHX
zf-C2H2_jaz
Rad50_zn_hook
Glrx-like
BNIP3
Motif
Other DBs
NCBI-GeneID:
112253707
NCBI-ProteinID:
XP_024281431
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All DBs
Position
LG07:complement(4049290..4062237)
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AA seq
618 aa
AA seq
DB search
MKRSPKILMTKPIKMQDNASFEEKLIEEAEEMDTSEDLQDDNLIEREHFHSSNNEQQDGY
LAVRRNVILERTKFNQRQQEAGETADDFISALHCLSEHCGYGALLSEMIRERLVMGLLDR
RLSQQLQMDPELTLDEAVTRIRQNELVKKPQDLPEYTYKVASSAANVESVLSHSKQQFPA
NTQCQSEKNQNSERPQETQTTQEKEEEPVDTDDSDDWIEGFSPGGEKPHYCFDCGKSYRK
VRDLIRHQRSHTGEKPHHCPVCDRSFAQLDKLKLHQKMHMKEKHVTQMEETKLKVDCVHT
QQRTASRGRQKTKMRAETPRKIVQSQPGKELSCKSSIRKNQHSEKLRQTQTMQENEEDPE
DTSDDWTKSFSTVEKPYICSDCGKSFKQANRLIRHQRTHTGEKPYNCPDCDKSFARLDNL
KLHQKTHMKEECNFRCSDCVKSFVRLKQLEKHQLTHNKSFERHRIHLSKRKQFLCTICGK
ECRNMKIHMRIHTGETPYLCTECGKSFPYTKSYQRHILTHNTSGERATYPCLECGKCFTR
RDGMLRHVRRIHTGERNHQCKDCGKRFFRKETLKRHMLVHTGEKPYQCSVCGQRFSQDGD
RKRHEKRHYSGVSNFLDL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagccccaagatactgatgactaagccaatcaagatgcaagacaacgcaagt
tttgaggaaaagctcattgaagaggcagaggagatggacacctcagaagacctgcaagat
gacaacctgatcgagcgggaacacttccacagttctaataatgagcagcaagatggatat
ttggcagttaggaggaatgtaatattagaacgaacaaaattcaaccaaagacaacaggaa
gcaggagagacagctgatgattttatctctgcacttcattgtttgtcagaacattgtggt
tatggagctctgctcagtgagatgataagagagagactagtcatgggattacttgacaga
agactgtcccagcaattacaaatggacccagaactaacacttgatgaagctgtcacacgc
attcgtcaaaatgaacttgtgaaaaagccacaggacctgccagagtatacctacaaagtt
gccagcagtgcagcaaatgtagagagtgtgctttcacatagcaaacagcaattcccagcc
aatacccagtgccaatcagagaagaatcaaaactcagaaagaccacaagaaacccaaaca
acacaggagaaagaagaggagcccgtagatactgatgactctgatgattggatcgagggt
ttcagtcctggaggagagaagccacactactgctttgactgcggtaagagctatagaaaa
gtgagggatcttataagacaccagagatcacatactggagagaagcctcaccactgccct
gtttgcgacagaagttttgctcaattagataagcttaaattacaccaaaaaatgcatatg
aaagagaaacatgtcacacagatggaagaaactaaactgaaggtagactgtgtgcacaca
cagcaaagaactgccagcagaggcaggcagaagactaaaatgcgtgcagaaacaccaaga
aaaatagtccagtcacagccaggaaaagaattgtcttgcaaaagttcaattagaaagaat
caacactcagaaaaactgcgacaaacccaaacaatgcaggagaatgaagaggatcctgaa
gatacttctgatgactggaccaagagtttcagtactgtagagaagccatacatctgctcc
gactgtggtaagagcttcaaacaagcgaatcgtcttataagacatcagcgaacacataca
ggagagaagccttacaactgccctgactgtgacaaaagttttgctcgattagataatctt
aaattacaccaaaaaacacatatgaaggaggaatgtaatttccgctgctctgactgtgtg
aaaagctttgtccgactgaagcagcttgaaaaacatcagctaacacacaataaaagtttt
gaaaggcacaggatacatttaagcaaaagaaaacaatttctctgcacaatttgcgggaag
gagtgtcgcaacatgaaaatacacatgcgaatacacactggagagacaccgtatctctgc
actgagtgtgggaagagttttccatatacaaaatcataccaaagacacatactaacacac
aatacctctggagaaagagcaacctatccttgtttggaatgtggaaagtgttttactcgc
agagatggcatgttgagacacgtgaggaggattcatactggagagagaaatcatcagtgc
aaagactgtggaaagcgattctttcgaaaagagacactgaagagacacatgctagttcac
actggagagaaaccataccaatgctctgtctgtgggcaacgcttctcccaagatggagac
agaaaacgccatgagaagaggcactactctggtgtctcaaatttcctcgatttataa
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