Oncorhynchus tshawytscha (Chinook salmon): 112253737
Help
Entry
112253737 CDS
T05605
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112253737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
112253737
NCBI-ProteinID:
XP_024281472
UniProt:
A0AAZ3PMU5
LinkDB
All DBs
Position
LG07:complement(6507743..6515738)
Genome browser
AA seq
867 aa
AA seq
DB search
MHIWILKIILLIAASLSLVEMYDNYGEICRNLCTCEEKEGILTVSCENRGIIRLTEISPV
HFSMYHLLLTGNLLKKLSLNDFINYTGATILHLGNNAIDEVETGAFNGLQGLKRLHLNNN
KIDVLRDDTFVGLESLEYLQIDYNYITNIEPNALSKLHQLTVLILNDNLLSALPTNIFRN
VPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELIALKAWLESISYTALV
GEVVCETPFRLHGRDLDEVSKQELCPRRAISEYEMRPPPPLSTNGYFQTTPASVTASATS
SNAFKASSRPTKGTRQSNRTRSKPTSRIPANPYNYGPIIAYQTKSPVPLDCPTTCTCNLQ
IADLGLNVNCQERKIENISDLKPKPYNPKKMYLTGNYIPVVRRSDFLEATGLDLLHLGNN
RISLIQDRAFGDLTNLRRLYLNGNLIDRLTAEMFFGLQSLQYLYLEYNKIREIVGGTFRF
VPNLQLLFLNNNLLKTLPAGIFTGLSLSRLNLRSNHFQNLPVSGVLDQLKLLLQIDLIEN
PWDCSCDVVGMKIWLEQLSAGTVVNEVKCETPKRHSGIDMRSIQSEQLCPDYSDVVVSTA
PPSDEPLPDRATTTETYQRSNPTSSVVPLSVLILSLLLVFIMSVFVAAGLFVVVVKKRKK
SQSDRTSTNNSDVSSFNLQYSLYSNNRTVPKVKAPAGHVYEYIPHPMGHMCKNPIYRSRE
GNTVEDYRDLHELKVTYRSDVDEERNSNMRSPTYSVSTIEPREDPSPAENAEHFFRGIIE
ADNQSPSGNSLEYKYTGPVSYTYNPNFDVRRQFLHPERIRETVLYGTAPSTVYVEPNRNE
YLELKAKLQVEPDYLEVLEKQTTFSQF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcatatctggatactgaaaataatcctcctgatcgcagcatctctgagtctggtcgag
atgtacgacaattacggggagatctgtaggaatctatgtacatgcgaagagaaggaaggg
atactgacggtaagctgtgagaatagagggatcatccgactgacagaaataagcccggtg
catttttcaatgtaccaccttctgctgacagggaacctcttaaagaaactgtccctcaac
gacttcatcaactacactggggcgaccatattgcatttaggcaacaatgctatcgatgaa
gtggaaacgggtgctttcaacggactccagggattaaagagattgcacttgaacaacaac
aagatagacgtcctaagggatgatacgtttgtcggcctggagagtttggaataccttcag
attgattacaattacatcaccaatatagagcctaatgccctgagtaaactgcatcagctc
acagttctcattttgaatgacaatttgctctctgctctgcctaccaacattttccggaat
gttcccttgacacatctggacctcaggggcaaccggttgaaaatgtttccttacattggg
ctcctggagcacatggacaaagtggtggaattacaacttgaggagaacccgtggaattgc
tcatgtgagctcattgccctgaaagcttggctggagagcatatcgtacacagctttggtg
ggggaggtggtatgtgagacaccgttcagactgcatggcagagacctggacgaggtctcc
aaacaggagctgtgcccccgccgagcaatctctgaatatgaaatgcgcccccctccccca
ctcagcaccaatggatatttccaaaccacgccagcttcggtgacagcctcagccacctcg
tcaaatgctttcaaggcatcgtcaaggcctaccaagggcacccgtcaatcaaaccgaacc
aggtcaaagcccacctcccggattccagctaacccttacaactatggccccatcattgct
tatcagaccaaatctcctgtgcctttggactgtcccaccacctgtacatgtaatctgcag
attgctgatcttggactaaacgtcaactgccaggagagaaagattgagaacatatctgac
ctgaagcccaagccatacaatcccaaaaaaatgtatctcacggggaattacattcctgtg
gtacgcagatctgatttcttggaggctaccggattggatttgcttcacctaggaaacaat
aggatatccctcatacaagacagagcttttggggatttaaccaacctgcgtaggctgtat
ttaaatggtaatctaatcgacaggcttacagcagagatgttttttggcctgcagagtttg
cagtatctctacttagaatacaacaaaatccgtgagattgtagggggcacgttccggttt
gtgccaaaccttcagctgcttttcctcaacaataaccttctgaaaaccttaccagcggga
atctttactgggctgtccctctctagacttaatctccgcagtaaccacttccaaaacctg
cctgtgagcggtgtgttagatcagttaaaattgctgttgcagatagatctgattgagaac
ccgtgggattgctcgtgtgacgtcgtcggcatgaagatatggctcgagcagctcagtgct
ggcaccgttgttaatgaggttaaatgcgagacacccaaacgtcacagcgggattgatatg
cgttccattcagtctgaacagctgtgtccagattactctgacgtagtcgtctcaacagcg
cccccctctgacgagcctctgccggacagagccaccaccacagagacctaccagagatct
aaccccactagcagcgtcgtccctctctctgtcctcatcctcagcctgctgctcgtgttc
atcatgtccgtttttgtggcggcggggctgtttgttgtcgtggtgaaaaagcgtaaaaag
tcccagagcgaccgcaccagcaccaacaactctgacgtgagctcgtttaacttgcagtac
agcctttacagtaataaccgaaccgtccccaaagtcaaagcccccgccggacacgtgtat
gagtacatccctcaccctatgggccacatgtgcaaaaatcccatttacaggtccagggaa
ggcaacacagttgaggattaccgcgacctccatgaattgaaggtgacttataggagcgat
gtggatgaggagaggaacagcaacatgagaagtcccacttatagcgtgagcactattgag
cctcgcgaggacccctcccctgcagagaatgctgagcacttcttcaggggcatcatagag
gcggacaaccaatccccctccggtaacagtctagaatacaagtacactggccctgtctcg
tacacgtacaacccaaactttgatgttagacgccagttcttacacccagagaggatacga
gaaacagtgctttatggcacagcgccgagtactgtttacgtggagcccaacagaaatgaa
tatttggaactaaaagcgaaacttcaagtcgagccggactacctcgaagttcttgagaaa
cagaccactttcagtcagttttga
DBGET
integrated database retrieval system
