Oncorhynchus tshawytscha (Chinook salmon): 112253830
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Entry
112253830 CDS
T05605
Name
(RefSeq) polycomb group RING finger protein 6-like
KO
K11470
polycomb group RING finger protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112253830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112253830
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112253830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
RAWUL
zf-C3HC4
zf-RING_2
zf-RING_10
zf-RING_6
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
112253830
NCBI-ProteinID:
XP_024281622
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All DBs
Position
LG01:complement(56968248..56976991)
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AA seq
288 aa
AA seq
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MEDSTTELEGPGCLSVGQQSEEATPTDISHQNSVDNDGSKDHNGTSNNVDSDSGDEPELP
LNQFYPYIRCTLCCGILIDSTTITECLHTFCKSCIVKHFFYSNRCPNCSIVVHQTQPLYN
IKPDRQLQDIVYKMLPHLEEMERARMIDFYKQRGLEVPKPVMASPAVPVLKNQKQRRALL
PQSVFAIPPELDVSLQLEFLGAEEGIDGYKPLERRYVRVSGDATVHHVALFIRRKMELSP
ACQVDVVCGDHLLDRYQSLREVQRSMRDDALQDGLLILHFGLVLAAHT
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcaccacggaactcgaaggacccggttgtttgagtgtcggtcagcagtca
gaagaggcgacaccaaccgatattagccaccagaacagtgtcgacaacgatggttcgaaa
gaccacaatgggacatctaataatgttgactcggattcaggggatgagcctgaactccct
cttaatcaattttacccttacatccgctgtactctctgctgcggaatcctaattgattcc
accaccatcacagagtgtctgcacactttttgtaaaagctgcatagtgaaacacttcttc
tacagcaacaggtgtcccaattgcagcattgtagtccatcagacacaaccattgtacaac
ataaaacctgacagacagttgcaagatattgtttacaagatgctgccacatctggaagaa
atggagagagcaaggatgattgatttttacaaacagagaggactggaggtgcctaaacca
gtgatggcgtcccctgcggtccctgtgctgaagaaccagaagcagaggagggcattgctg
ccccagtctgtcttcgccatccctcctgaactggatgtgtcactgcagctggagtttttg
ggagcggaagaaggcatagacggctataagcctttggagaggcggtatgtgcgagtatcg
ggggatgccactgtccaccatgtggcgctcttcatcaggaggaagatggagctgagcccc
gcctgccaggtggatgttgtgtgtggagaccacctcctggaccgttaccagtcgctacga
gaggttcagcgctccatgcgagatgacgctctacaggatggtcttttgattctccacttt
ggactggtgctggctgctcacacgtga
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