Oncorhynchus tshawytscha (Chinook salmon): 112253851
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Entry
112253851 CDS
T05605
Name
(RefSeq) lymphocyte-specific helicase isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112253851
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112253851
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
Shugoshin_C
Homoserine_dh
Motif
Other DBs
NCBI-GeneID:
112253851
NCBI-ProteinID:
XP_024281659
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All DBs
Position
LG01:57030346..57049182
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AA seq
853 aa
AA seq
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MSCVKEETRSVSPHCPKPNESEEPLGTAMEETLPGNSAASVKAENAVSEVVITKEMEEEE
MQLVEKGEKKEEEIMKKAREAQRKETHDIRFKRLQHLLDKSNIYSKFLLTKMEQQQQEEM
LKKEKLEKKAEKSIGRKAGRVEKNKRKREEDYKIADVMSKEEIMSKAKKCKVEDEEVPGM
KKLEAEDIEKMSDSNADIKGRLSETVRDNAKHLLDPDRKVNGQAVPAQQPLLFTGGVMRS
YQIEGVEWLRMLWENGINGILADEMGLGKTIQCIAHVAMMLERKVMGPFLVVAPLSTLPN
WINEFKRFTPEVSVQLYHGPAKDRMALLKQIRKPQGPHNMLPVVVTSFEIAMIDRKFLQR
FHWKYLIVDEGHRIKNLNCRLVRELKMLPTDNKLLLTGTPLQNNLAELWSLLNFLLPEVF
DDLKSFESWFDIDTIGSDAKNVVANEREQNILHMLHQILTPFLLRRLKSDVTLEVPPKKE
IVVYAPLTVKQESFYTAVVNKTIAKVLGQVKVEAPVVLTTDGRPKRRTRRPVDYKETDGD
TPYDLEKYLERVQKEAEQSPAPVVDVQMPLDSQINLKLQNILMLLKRCCNHPYLIEYPLD
PATQEFKIDEQLVQTSGKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYQY
SRLDGSMAYPDREENMTKFSSDPEVFLFLLSTRAGGLGINLTAADTVIIFDSDWNPQADL
QAQDRCHRIGQTKPVVVYRLVTANTIDQKILERASAKRKLEKMVIHKKKFKGGKAELKQT
KSCVDVSELMDLLNTRDYEKEVKSTKGKVISDKDLEALLDRSDLLDKAKRSSKQKVGVFK
VIEAKESSEISLT
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtgtaaaggaagaaacccgaagcgtgtctcctcattgtccgaagcctaacgaa
tctgaagaaccgctgggtacggctatggaggagactttgcctggaaattcagctgcaagt
gtgaaagctgaaaatgcggtgtctgaagttgtcatcacaaaagagatggaggaggaggag
atgcagttggtggagaaaggagagaaaaaagaagaggagattatgaaaaaggctcgagaa
gctcagaggaaggaaactcatgacattcgcttcaagagactgcaacacttgctggacaaa
agtaacatatattccaaatttcttcttacgaagatggaacagcagcagcaggaggaaatg
ctgaagaaagaaaaactggaaaagaaggcagagaagagcattggcagaaaggctgggaga
gttgaaaaaaataaaaggaagagggaggaagactataaaattgctgatgtcatgtctaaa
gaggaaattatgtccaaggccaagaaatgtaaagtggaggacgaggaggtccctgggatg
aagaagttagaagcagaggacatcgaaaagatgagtgactccaatgctgacatcaagggc
cgtctgtcggagactgtgagagacaatgccaagcatctactggacccagacaggaaggtg
aacgggcaggctgtgcccgcccagcagcccttgctcttcactgggggagtcatgaggtct
taccaaatagagggtgtggagtggctcaggatgttgtgggagaatggtatcaatgggatc
ctggcagatgagatgggtctggggaagacaatccagtgcatcgcccacgtggccatgatg
ttggagagaaaggtgatgggtcccttcctggtagtggcccccctgtccactctgcccaac
tggatcaatgagttcaagcgcttcactccagaggtgtcagtgcagctgtaccatggacct
gctaaggataggatggcgttgttaaagcagattcgtaagccccagggacctcacaacatg
ttacctgtggtggtcacctcctttgagattgccatgatagacaggaagtttctgcagcgc
tttcactggaagtacctgattgtggatgaaggccacaggatcaagaacctgaactgccga
ctggtgagggaattgaagatgctgcccacggacaataagctgctcctgacgggcacaccg
ctgcagaacaatctagctgagctgtggtcactgctcaacttccttctgcctgaggtgttt
gacgacctcaagagctttgagtcgtggtttgacatcgacaccattggttcggatgcaaaa
aatgttgtggctaacgaacgagagcagaacatcctgcacatgctccaccagattctgacg
ccattcctgctgagaagactgaagtctgatgtgacgttggaggtgccgcccaaaaaggag
attgttgtgtacgccccactcactgtcaaacaggagtctttttacactgctgtggtcaac
aagaccatcgccaaagtgctgggccaggtgaaggtggaggctccagtagtgctgacgacc
gacggcaggcctaagcgcaggaccaggaggcctgtggactacaaagagactgatggtgac
acgccctacgacctggagaaatacctggagagggttcagaaggaggctgagcagagcccc
gccccggttgtggacgtgcagatgcccctggactctcaaatcaacctgaaactgcagaac
atcctcatgctgctgaagaggtgctgtaaccacccctatctcatagagtacccactggac
ccggccactcaggagttcaagattgatgagcaactggtccagacctcagggaaattcctc
attctagacagaatgctgccagagctgaagaagaggggacacaaggtgctgattttcagc
cagatgacgtccatcttggatatcctaatggactactgctacctgcggggttaccaatac
agccgactggatgggagcatggcctatcccgacagagaagagaacatgacaaagttctct
tctgacccagaggtgtttctcttcctactgagcaccagagcaggtggcctgggcatcaac
ctgactgctgctgacacggtcatcatctttgacagtgactggaaccctcaggctgacctg
caggcccaggacagatgccaccgtatcggacagacaaaacccgtggtggtgtaccgactg
gtcactgccaataccattgaccagaagatcctggagagagcgtcagccaagaggaagctg
gagaagatggtcattcacaagaaaaaattcaaaggaggaaaggctgagctcaaacagacc
aagagttgcgtcgacgtgtctgagctgatggatcttctcaacaccagagattacgagaag
gaagtgaaaagcaccaaggggaaggtcattagtgataaggacctggaggctctgctggac
cgcagtgaccttctggacaaggccaagaggagctctaaacagaaggttggagttttcaag
gtgattgaagccaaagaatcatcggagatcagcttgacctaa
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