Oncorhynchus tshawytscha (Chinook salmon): 112253938
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Entry
112253938 CDS
T05605
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253938
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112253938
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10
Foie-gras_1
SNAP
TPR_7
Motif
Other DBs
NCBI-GeneID:
112253938
NCBI-ProteinID:
XP_024281837
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All DBs
Position
LG14:complement(13059007..13076560)
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AA seq
1274 aa
AA seq
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METHEETPIIYTMENKPIVTCAGDQSLFTSLYTSLAQQLPKEPMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKDGNRALLTFPFLHIYWTDCCDTEMYKASVKDDMLRWQSTLRLHGSVD
WLIVVVESEAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKESSRSQDSWNSF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCAPVKRWSGLLLRRPIDMEKRELIQRGEAN
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANCSHTVGLWTYATEKLKSLGYLCGLVAEKGPTSEDLNRTVDL
LAGLGEERPETVNSLQSPYKKLNEALSSVEAFEKHYLELSQAAMEMYRAIGRMRSSRLIG
KSLAEFYMKKGDPERAEGFLDDSLRSYVAEGWSLQVTHTRKQMAECQKLLQQTEDYLQTS
ALLAGDANLTEEERKHFYQVILTFASQPPAPSDQTVALSMAAFAQLRQMQFSPPGAVVHV
GAALQLELRVRCLMPVAVQVEQLAATLHFSLEQGGARGRAGGTQRRTGQGPQGQGDGVVL
FPQGSPLAGAGMGASLPPALELYEMQDRSPSDSSLNSTGVVCKNMHLLLRRHDSSASLDT
PTAGALPAAVAVDDGAQMLRARDITLQPGDNSILFTAPTGEPGSYTLRQLCGSVGRVQFV
QSHIYPVVQYEVYSQEPQLTIEPLSDNLLAGIPQKVKFTIATGHYSVKKGDALQLSNTDS
MPILHSSCCSATILSSTGELVGERALSVQSSEKVTSISLPPTPPYHTLEFQLEVLCHIPP
TPFKPDIERLTNGEVRHRPKNHSQADSGMIHIDQKVSIDCPWSIYSTLISLTFYVPFKAK
HSILSAGKRKYIQVCLQNVSDTNFHLVDPVLTERQPTIPVELLSFNAKTQQTVCSQQSVF
CLWEMRWVKHLPLCLQCAFSASFAPVSASDAHTAFKPYRYEFQLDRVSTLYSLKAEILPS
SGDQHCRTGALCGLEVSITRQAEPSETEGEEEESTEIEGLRTTKLMYEVVDNSSNWAVCG
KSTGVVSMPVAASATHRVQMEVMPLFAGHLPFPNIKVFKYLPHSAVPAIQPDTDSCLEND
TMSLLDKGLDDQGDTASIRSRGSIHSVGSGEQQRGLPMPRLEPFSPGQVFYWSQGRQVLV
LPVTDDHVMEVNVT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggagacccatgaagaaacgccaataatctacacaatggaaaacaagccgattgtgaca
tgtgctggcgaccagagcctgttcacttccctctacacctctctggcacagcagttaccc
aaggagcccatggagtggaggaggtcctacggacgcgcaccaaagatgattcacctcgag
gccaactttgttcagttcaaagaggagctgcttcctaaggatggaaatagagccttgctc
accttccccttcctgcacatatactggacagactgttgtgacacagagatgtacaaggcg
tcggtgaaggatgacatgctgcggtggcagagcaccctgcggctgcacggctcggtggac
tggctcatcgtggtggtggagagcgaagccaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtagacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtggttctgtctgaccctctgaaggagtcgtctcggtcccaggattcgtggaactccttc
ctgaccaagctgcgcaccttgctgctcatgtccttcaccaagaacctgggtcgcttcgag
gatgacatgcgcacgctccgcgagaaacgcaccgagcccggctggagcttctgcgactac
ttcatggtgcaggaggagttggcctttgtgtttgagatgctgcagcagtttgaggatgct
ctggtccagtatgacgagctggacgctctcttcactcagtatgtcctcaattttggggct
ggagacggggccaactggctgggctcattctgtgccccggtgaagcgctggagcgggctg
ctcctgcggcggcccatcgacatggagaagcgcgagctgatccagcgcggtgaggccaac
ctgctggacctgcgcagctacctcttctcccgccagtgcaccctgctcatcttcctccag
aggccctgggaggtcacccaacgagccctggagctgctgcacaattgtgtccaggagctg
cgcctgctcgaggtgtctgtggtccagggggcgttggactgctgggtgttcctcagctgt
ctggaagtgctgcataggatcgagggctgctgcgaccgcgcccagctagaggccaactgc
tcccacactgtcggcctgtggacctacgccacagagaagctaaagtctctgggctacctg
tgtggcctggtggctgagaagggccccacctccgaggacctaaaccgcaccgtagacctt
ctggctggcctgggggaagagagaccagagacggtcaacagcctgcagagcccttacaaa
aaactcaatgaggccttatcgtctgtggaggcatttgaaaaacactatctggagctgtct
caagctgcaatggagatgtacagagccataggcaggatgcgctcatcccggctcattgga
aagagtctagctgagttttacatgaagaaaggtgacccggagagagcagagggcttcctt
gatgactctctgaggtcctacgtggcagaggggtggagcctgcaggtgactcataccagg
aagcagatggccgagtgtcagaagctcttgcagcagactgaggactacctgcagaccagt
gccttgctggcgggcgacgccaacctgacagaggaggagaggaagcacttctaccaggtg
atccttaccttcgccagccagcccccggcaccctcagaccagactgtggctctgagcatg
gcggcattcgcccagctgcgccagatgcagttcagcccgcctggcgctgttgtgcacgtg
ggtgccgccctgcagctggagctgcgtgtgcgctgcctgatgcctgtggccgtgcaggtg
gagcagctggctgccactctccacttcagcctggagcagggtggggcgaggggccgggcg
ggcggcacccagaggaggacaggccagggaccacaaggccagggggacggggtggtcctg
ttcccccagggaagccccctagctggggccgggatgggcgcttcgctaccccccgcactg
gagctttatgaaatgcaggaccgcagcccgtcggacagctcgctcaactccacgggggtg
gtgtgtaagaacatgcacctgctgctgcggcgccacgacagctcagcctccctagacacg
cccaccgccggggccctcccggcagcggttgccgtggacgacggggcccagatgctgagg
gcacgcgacataacgctacagcccggcgacaacagcatcttgttcacggcccctactgga
gagccgggctcgtacacgttacgtcagctgtgcgggagtgtggggagagtccagtttgtc
cagtctcacatctaccctgtggtgcagtacgaggtctactcccaggagcctcagctcacc
atcgagcccctctcagacaacctgttggcaggcattccccagaaggtgaagttcaccata
gcaacaggccactacagtgtgaagaagggtgacgcgctgcagcttagcaatacagactcc
atgcccatcctccactctagctgctgctctgctaccatcctgtccagcacgggagagctc
gtgggggagcgtgctctttctgttcagtcatcggagaaggtgaccagcatttccctgccc
ccaacccctccctaccacaccctggagttccagctggaggtgctgtgccacatccccccc
acgcccttcaagcccgacatcgagcgtctcaccaatggcgaggttcgccaccggcccaag
aaccacagtcaggcagacagtggcatgatccatatcgaccagaaggtctccattgactgt
ccttggtccatctactccacgctcatatccctcaccttctatgttcctttcaaagccaag
cactcaatactctctgctgggaaaaggaagtatatacaggtgtgtctccagaacgtgtct
gacacaaacttccacctggtggacccggtcctcacagagcgccagcccacaatcccggtg
gagctgctctcattcaatgctaaaacacaacagacggtgtgcagtcagcagtcagtcttc
tgcctgtgggagatgcgttgggtcaaacacctcccactgtgcctgcagtgtgcattctcc
gccagcttcgcgcccgtctccgcctctgacgcacacacagccttcaaaccctaccgctac
gagttccagctggaccgggtctctaccctttacagcttgaaggccgagatcttgccgtcg
tctggagaccagcactgtcgcaccggcgccctctgtggcctcgaggtatccatcacacgg
caggcagagcccagcgagactgaaggggaggaggaggagtctacagaaatagagggcctg
aggaccaccaagctcatgtatgaagtggtagacaacagcagtaactgggcggtgtgtggc
aagagcacgggggtggtgtccatgcccgtggctgccagcgccacacacagggttcagatg
gaggtcatgcccctgttcgctgggcacctgcccttccccaacatcaaagtgttcaagtac
ctgccccacagtgccgtcccagccattcagccggacacagacagctgcttagagaacgac
accatgtccctgctggacaaaggtctggacgaccagggcgacacggccagcatccgtagc
cggggcagcatccactcggtgggcagtggggagcagcagaggggtctgcccatgccccgg
ctggagcccttcagtccaggacaggtgttctattggagccaggggcggcaggtgctggtg
ctgcctgttactgacgaccacgtgatggaggttaacgtcacatga
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