Oncorhynchus tshawytscha (Chinook salmon): 112253946
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Entry
112253946 CDS
T05605
Symbol
sh3bp4a
Name
(RefSeq) SH3 domain-binding protein 4-A
KO
K20066
SH3 domain-binding protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253946 (sh3bp4a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112253946 (sh3bp4a)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112253946 (sh3bp4a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Src homology (SH) domain-containing proteins
SH3 domain binding proteins
112253946 (sh3bp4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
SH3_1
SH3_9
ZU5
Pox_RNA_Pol_22
Motif
Other DBs
NCBI-GeneID:
112253946
NCBI-ProteinID:
XP_024281855
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All DBs
Position
LG14:11874855..11903821
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AA seq
981 aa
AA seq
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MAAHRIIRVTNSNHVLPRCKSEGTLIDLNEGLSEASLTDVKVPSSSALRLDNSASFVTAH
EVVAIKDYCPSSFTTLKFSKGDRLYVMDTSGGEWWYAHNNTEMGYIPSAYVQPINCRNSS
LSDSGMIDNLGECTEEGAKELDLLGEWTGVSVKTTPYSPYFNSNPFSLHTSSTNPFINSG
HLHGSLDQNCNERGRSTDLLVFDSLASPVSPWGPNSTSRTTMINGFSSCNIFDMMSATSP
NQDLQVLQTLRRDNPFFRSKRSYSLSELSILQTQSNPPLPSSGFFTGLKAPSPEQFQSRE
DFRTAWLNHRKLARSCHDLDSLGQSPGWGQTQPVETNIVCKLDSRGGAVQLPETQISVHV
PEGHVVPGDTQQISMKALLDPPLELNNDHCSTVSPVVEIKVSNMETKSFITLEMTVSVTV
KKDSGQVAEVLCVRSDCKEGPYIIIPHAYLYKDTVQVQLDNLEPCMYVVVVVQAQHVNLN
TTVWDNVLKKVTLGVYGPKHIHPSFKTVVALFGHDCAPNTLLVSEVGKQAHSSPPVALTL
WGKHQFVLGRPQDLQVGLYSNMSNYMIKANEQTRMIRAFQVKLGKVSRLIYMITSNNPED
ISDFTLQVQVKDGLDCILAQFCVQTPQPPPKSGARNTGHRRFLKKKEVVGKILLSPLAIT
AKYPQFQERCITNLKFGKLLKSVIRQNKSTYLLEYKKGDVIALLSEEKIKLRGQLWTKEW
YIGYYQGKTGLVHAKNVLVLGKVKPIYFCGPDLTTTMLVEQILKPCKFLTYIYASVRTVL
MENIGNWKTFADALGYGNLPLSCFCRTELDNEPEKVASVLEKLKEDCTNMDIKERKTFQK
ELMTALLKMDCQGLVARLIMDFVLLTTAVEVAPRWRELAEKLARVNKQQMEQYDAPHRDK
NGLVDNESMWKPAYDFLLTWAAQIGDSYRDVIQELHLGLDRMKNPITKRWKHLTGTLILV
NSLDTLRSSAFSPVGQGDYAI
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaccggatcatcagagtgaccaacagtaaccatgttctccctcgctgcaaa
tcggagggcacgctcattgatctcaatgaagggctctctgaggctagccttacagatgtc
aaagtgccttcttccagtgccttacggctggacaattcagcttcctttgtaactgctcat
gaagtagtcgccatcaaagattactgcccatctagctttaccactttaaagttttccaaa
ggtgaccggctttatgtgatggacacgtcaggtggagagtggtggtatgcccacaacaac
acagagatgggctacatcccctcagcatacgtccagcccatcaactgtaggaactcatcg
ctcagtgatagtggcatgatagacaatctaggggagtgtacagaggaaggggctaaggag
ttggatctcctaggggagtggacaggggtgtccgttaagaccactccttattcgccttat
tttaacagcaatcccttctccctccatacctcctccaccaaccccttcatcaacagtggt
catctacatggttctctggaccagaactgtaatgagaggggaaggtccacggacctgtta
gtctttgactccctggcctccccagtctccccttggggacctaactctacctccaggacc
accatgatcaatggcttcagtagctgcaacatatttgacatgatgtcagccaccagcccc
aaccaggacttacaggttttacagacactgcgaagggataacccattcttcaggagcaag
cgatcgtacagtttatcggagttgtccatcctacagacacaatccaacccccccttgcct
tcttccgggttcttcaccggcctcaaggctccctcgccagagcagtttcagagcagggag
gacttcaggactgcgtggctaaaccatcggaagctggccagatcttgccatgatctggac
tctctggggcagagccctggttggggacagactcagccggtggagaccaacattgtctgt
aaactagacagtcgtggaggggccgttcagctcccagaaacccagatcagcgtccatgtc
cctgaaggacacgtggttcctggagacacccagcagatctccatgaaggccctactggac
cctccactggagctgaacaatgaccactgctccacagtcagcccagtggtggaaatcaaa
gtgtccaacatggagaccaagtccttcatcactctggagatgaccgtgtccgtgacggtg
aagaaagacagtggtcaggtagccgaggtgctctgcgtccggagtgactgcaaggaggga
ccctacattatcatcccacatgcttacctatacaaggacacagtacaagtccagttggat
aacttggagccgtgtatgtacgtggtggtagtggtgcaggcccagcacgtcaaccttaat
acaactgtatgggacaatgtgttgaagaaagtcaccctgggtgtctatgggcccaagcac
atccatccttcgtttaagacagtcgtggccctatttgggcatgactgtgcccctaatacc
ctactggtgagtgaggtggggaagcaggcccactcctccccgccagtggcgctcacgctg
tgggggaagcatcagtttgtcctgggtaggccccaggaccttcaggttggcctatactcc
aacatgtctaactatatgattaaggctaatgagcaaaccaggatgattcgggccttccag
gtcaaactggggaaggttagccgactcatttacatgatcacatccaacaaccctgaggac
atatcagacttcaccttgcaggtccaggtcaaagacggcctggattgtatcctggctcag
ttctgcgtccaaacaccgcaaccgcctccgaagagtggagcgcggaacactggccacagg
cggttcctgaagaagaaagaggtggtgggtaagattcttctgtcacctctggccatcact
gccaaatatccacagttccaggagcgctgcatcaccaacctgaagtttggcaagttgctc
aaatctgtgatcaggcaaaacaagagcacatacctgttggaatacaagaagggagatgtg
atcgccttgctgagcgaggagaaaatcaaactacgaggacaactgtggaccaaagagtgg
tatattggatattatcagggaaagaccggtcttgttcacgcgaaaaacgttctggttttg
gggaaagtcaagcctatttatttctgtggtccggacctcacaacaaccatgctagtggag
cagattctgaagccttgcaaatttctcacatacatctacgcctctgtgaggacagtactc
atggagaatatagggaactggaagacctttgcagacgcactgggatatgggaacttgcct
ttgtcttgtttctgtcggactgaactggacaacgagcctgagaaggttgcctcggttctg
gagaagctcaaggaggactgcactaacatggacatcaaggagagaaagaccttccagaag
gaactcatgacagccctgttgaagatggactgccaaggcctggtggccaggctgatcatg
gactttgtcctgctgaccacggccgtggaggtggccccgcgctggagggagctggcggag
aagctggcccgggtgaacaagcagcagatggagcaatacgatgctccgcacagggacaag
aacggcctggtggacaatgagtcaatgtggaagccagcctacgacttcctgctgacctgg
gcggcccaaatcggggacagctaccgggacgtgatccaggagctgcacctgggcctggac
cgaatgaagaatcccataaccaagcgctggaagcatctcaccggaacgctcattctggtc
aacagcctagatacgttacgcagctctgccttcagccctgtaggacagggggactatgcc
atttga
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