Oncorhynchus tshawytscha (Chinook salmon): 112253973
Help
Entry
112253973 CDS
T05605
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112253973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253973
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
112253973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
112253973
NCBI-ProteinID:
XP_042179435
LinkDB
All DBs
Position
LG01:complement(57387651..57502755)
Genome browser
AA seq
1881 aa
AA seq
DB search
MVDKNIYIVQGEICTVVGAIKRNSRWNTHTPLDEEQDPLLNSFSHLKEILNNMKELSDVE
PNIFLRPFLEVVRSEDTTGPITGMALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGANMKKLKMRAGGMSESSKWKKQKRSPHPPRHM
VRSASGGLEQAPTTTLSNNNLSDRVRNKIGGIDIEGGVPFIEQDSLSVSDSVASSMSIPT
DSGLDTCSKATSREDLTDLDQSSSAATTPSTEPGHLYTQSECRQVEHAQSASVESIPEVL
EDGESVTEHSDSSSLHDMDYVNPRGVRFTPQQTQRDGEDGAALIPYSLPCLRELFRFLIS
LTNPHDRHNTDAMMHMGLQLLTVALEAAHIAPYQSLLGLVKDELCRHLFQLLSVDRMNLY
AASIRACFLLFESMRGHLKFQLEMYLKKLMDIITSENMKMPYEMKEMALEALVQLSRIPS
FVTELYINHDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQ
AKVLNSTTQQDHSAEMVLAEGECSTNDRTDTTTEASRQVNSANGQNVPEADSVPLPPTSG
HLMAEKMRLGRQDQEETEPAEKKEPKKPHRFSSCLPDSQELLDIRNKKKLLNSGTEQFNQ
KPKKGIQFLQEKGLLSSPMDNNEVAQWLRENPRLDKKQIGEFISDRKYMELLDSFVNTFT
FRGLRIDEALRLYLEAFRLPGEAPVIHRLLETFTDTWHKVNGSPFMTNDAGFALAYAVIM
LNTDQHNNNVRKQNIPMTIEQFKKNLKGVNGNTDFDQDMLEDIYNAIKNEEIVMPDEQSG
LVKENYVWNVLLHRGATSEGVFLHVPAGSYDHDLFTMTWGPTIAALSYVFDKSLDDTIIQ
KAIAGFRKCAMISAHYGFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNGKAQIAAKTM
FHLAHRHGDILREGWKNIMDSMLQLFRAELLPKAMVEVEDFVEPNGTISLQREETPSNRG
ESAVLSFVNWLTLSGAEQSGQRGPSTENQEAKQAAMLCIKQCDPEKLITESKFLQLESLQ
ELMKALISVTPDEETYDEEDAAFCLEMLLRIVMENRDRVSCVWQTVRDHLCHLCVQATES
CFLVERAVVGLIRLAIRLLRREDISSQVLLSLRLLLMMKPHVLARVSREVAYGLHELLKT
NAANIHCTDDWFTLFALIECIGAGIKPPASFKVTSTTPDIDTGAQSDSELSFHHLSEVSL
DRGYTSDSEVYTEHGKSRMPRSVTDVDVTSSGWLVVGKDDLDISKVAASGSKTLLNPLVN
QYSLSLGQDMGFHDTKSLIKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYR
TYEKKKNHKYDSQKSRVRRKPRDKEGASRRAKASSQRPSRSHSDDEEDEGVPASYHTVSL
QVSQDLLDLMHTLHTRASSIYSSWAEEQRRLEPVGKKIEADSQTLWTSCWCPLLQGIAWL
CCDARRLVRMQALTYLQRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVCGM
EETRMRACTLLSKVFLQHLSPLLSLSTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLK
NMLLVMDTAGIFHSADSRTGYSDLWEITWERIDCFLPNLREELFKQTVIPQPDPAPSPPV
ELVQPAAPCPPASPPPAQAPSPVSVPASPTEPKTSSRPVSPQDPPPPSTNGTDRSSPVPP
STPPMPTPVKMSPQIASPLIQSPTSQSPLILQPLASHLQVGGVPPMSLPIILNPALIEAS
CPVPLLPAPHPTEHSDTPQVK
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatatacattgtccaaggggagatctgtactgttgtaggtgccatc
aagaggaattcaaggtggaatacccatactcctttggatgaggaacaagatccattgctt
aacagtttcagccacctgaaagagattctcaacaatatgaaagagctgtcagatgtggag
cccaacatattcctgcggcccttcctggaggtggtacgatctgaagacaccaccggacca
atcacaggcatggccctcacctctgtcaacaagttcctttcctacggcctcatagatgct
aaccacgaggcggcggcggaggctatcgagaacatggcggatgccgtcacacacgccaga
ttcgtagggacggaccccgccagcgatgaagtagtgctcatgaaaatcctacaggtcctg
aggactttgctgctcacgcccgtaggagcccacctgaccaacgagtctgtgtgtgagatc
atgcagtcgtgtttccgcatctgcttcgagatgcgcctcagcgagctcctgaggaaatca
gccgaacacacactggtggacatggtgcagctgctgttttccagactaccccagtttaaa
gaggaggccaaaagttttgtgggcgccaacatgaagaagctgaagatgcgtgctggtggg
atgagtgagtcgtcaaagtggaagaagcagaagcgttcgccccaccccccccgccacatg
gtgcgaagtgcctcgggcggattggagcaggcccctaccaccaccctcagcaacaacaac
ctctctgaccgtgttagaaacaagatcggtgggatagacatagaaggtggtgtcccattc
attgagcaggatagtttgtctgtctcagacagcgtggcctcctccatgtccatccccaca
gacagtggcctggacacctgctccaaggccacctccagagaggacctgacagacctggac
cagagcagctctgccgccaccaccccttccacagagcctggacacctgtacactcagtct
gagtgtaggcaggtggagcatgcccagtcagcctcggtggagtccatccctgaggtcctg
gaggacggagaatctgtgacggagcattcggactcatcctcattacatgacatggactat
gtcaacccccgaggagtccgcttcacaccacagcaaacacagagagacggtgaggatggc
gcggctctcatcccctactccctgccctgtctgcgggagctcttccgcttcctcatctca
ctgacgaacccccatgaccgccacaacacggacgccatgatgcacatgggcctgcagttg
ctgaccgtggctctggaggcggctcacatcgccccctaccagtcactgctgggcctggtc
aaagacgagctctgcagacacctcttccagttgctaagtgtggaccgtatgaacctgtat
gccgcctccatccgagcgtgcttcttgctctttgagagcatgcgaggacatttgaagttc
cagctcgagatgtatctgaagaagctgatggacatcatcacgtcagagaacatgaagatg
ccctatgagatgaaggagatggccctggaggccctggtgcagctttcgaggatccccagc
ttcgtcaccgagctctacatcaatcatgactgtgacttctactgctcaaacctgtttgaa
gacctcaccaagctgctctccaagaatgccttccctgtgtccggacagctctacacaacc
cacctcctctcactagaggccctactcactgtgattgacagtactgaggcccactgccag
gccaaggtgctcaacagcaccactcagcaggaccactcagcagaaatggtgttggcagaa
ggggagtgctcaaccaacgaccgtacagacacaaccacggaagcgagcaggcaggtgaac
agtgccaacggtcagaatgttccagaggctgacagtgtgcccctaccacctaccagcggg
cacctgatggcagagaagatgagactgggcagacaagaccaggaggagacagaaccagct
gaaaagaaagaaccaaaaaagccacatcgcttctcgtcttgtttacctgattctcaagag
ctgttggacatcagaaataaaaagaagctgctgaacagcggcacagagcagttcaaccag
aagcctaagaaggggatccagttcctgcaggagaagggtctcctcagcagccccatggac
aacaacgaggtggcccaatggctccgggagaacccccgccttgacaagaagcagatcgga
gagttcatcagtgaccgcaaatacatggagctactggacagctttgtcaacacgttcacc
ttccgagggctgcgtattgacgaggcgctgcgtctgtatctggaggccttcagactgcca
ggagaggctccggtcatccatagacttttggaaaccttcacagacacctggcataaagtg
aacggctctcccttcatgaccaacgacgcaggcttcgccctggcctatgctgtcatcatg
ctcaacacggaccagcacaacaacaatgtgcgcaagcagaacatccccatgaccattgag
caattcaagaagaatctgaagggtgtgaatggaaatacagactttgatcaggatatgctg
gaggacatctacaatgcaatcaagaatgaagagatagtgatgccagacgagcagtctggc
ctagtgaaggagaactatgtatggaacgtgctgctccaccggggggccacctccgagggg
gtcttcctccatgtgcctgccggcagctacgaccacgacctgttcaccatgacctggggg
cccaccatcgcagccctctcctacgtcttcgacaagagcctggacgacacaatcatccag
aaggccattgctggctttaggaaatgtgccatgatatcagctcattatggattcagtgat
gtttttgataatttgatcatctccctctgcaagtttacaacgctcagcagtgagtcggtg
gagaacctgcccacagtgtttgggagtaacgggaaggcacagatagcggcaaaaacgatg
ttccacctggcccaccggcacggtgacatcctgagggagggctggaaaaacatcatggac
tccatgctgcagctgttcagagccgagctgctgcccaaggccatggtggaggtggaggat
tttgtggagccaaatggaacgatttcccttcaaagagaagagacaccgtcaaatcggggt
gagtctgcggtgctgagctttgtgaactggctgacactgagtggagcagagcagtctggt
caacgtgggccctctactgagaaccaggaagccaagcaggcagccatgctctgtatcaag
caatgtgacccagagaagctgatcacagagagtaaattcctgcagctggagtctctacag
gagctgatgaaggccctgatctcagtcacacctgatgaggagacgtatgatgaggaggat
gctgcgttctgcctggagatgctgctacgcatagtcatggagaacagggaccgtgtgtcg
tgtgtatggcagacggtgcgagatcacctgtgccacctgtgtgtccaggctacagagagc
tgcttcctggtggagagggccgtggtgggcctcatcagactggccatccgcctgctgcgc
agagaggacatcagctcccaggtgctgctgtccctgcgtctcctgttgatgatgaaacca
cacgtcctggcccgggttagccgggaggtggcctatggcctccatgagctgcttaagaca
aacgctgccaacatccactgcacagacgactggttcacccttttcgccctaatcgagtgc
atcggggccgggatcaaaccccccgcctccttcaaggtcacctccactaccccagacatc
gacacaggtgcccagtcagacagtgagctgtcgttccaccacctcagtgaggtgagtctg
gaccgggggtacacctcagactctgaggtctacacagagcatggaaagtccaggatgccc
cgctctgtcactgacgtggacgtgactagcagcggatggctggtggttgggaaagacgac
ctggacatcagcaaggtagcggcttctgggtccaagaccctgctaaaccctctagtgaac
cagtacagcctgtccctgggtcaagacatgggtttccacgacaccaagtctctcatcaag
tgtgtggagtccctctccttcatagtacgagacgctgcacatgtcacccccgagaacttt
gagctgtgtgtcaaggccatccgggtgtttgtggaggccagcctaaacggaggctacagg
acctatgagaagaagaagaaccacaagtacgactcccagaagtcccgtgtgaggaggaag
ccccgggacaaggagggtgcgtcccgccgcgccaaggcctccagccagaggccttcccgt
tcccatagtgatgacgaggaagacgagggggtccctgccagctaccacacggtgtcatta
caggttagtcaggacctgttagatctgatgcacacgctgcatacgagggcctccagcatc
tacagctcctgggcagaggagcagcgccgcctggagccagtagggaagaagattgaggcc
gactcccagacactgtggaccagctgctggtgcccactgctccaagggatagcctggctg
tgctgcgacgccaggaggctggtgcgaatgcaggccctgacctacctccagagggcactg
ttggtccatgacctgcagacactagatgctgtggagtgggagtcctgttttaacaaggtg
ctgttccccctgctgaccaagcttctggacaatattagccctgcagacgtgtgtggcatg
gaggagaccaggatgagggcttgcaccctgctgtcaaaggtgttcctgcagcacctctct
cccttgttgtctctgtccaccttcgctgccctgtggctcaccatcctggacttcatggac
aagtacatgcacgctggctccagtgacctgctgctggaggccatcccagagtctctgaag
aacatgctgctggtgatggacacagcaggaatcttccacagcgctgactctcgtacagga
tactctgacctgtgggagatcacttgggaacgcatcgactgcttcctgcctaacctccgg
gaggagctcttcaaacagacagtcataccacaaccagatcctgctcctagtcccccagtg
gagcttgtccagccggctgccccctgccccccagcctcgccacccccagctcaggcccca
tctcctgtgtcagtgccagcttcccccacagagccaaagacctccagcagaccagtgtcg
ccccaagatcccccaccacctagtaccaacggaacagacagatcatctccagtgcctcca
tcgactccccccatgcccaccccagtgaagatgtccccccagatcgctagcccactgata
cagtcccccacgagtcaatcccccctcatcctgcagcccctggcctcccatctgcaggtg
gggggcgtgccccctatgtccctccccattatcctcaaccccgccctcattgaggccagt
tgccctgtcccgctgctccccgctccccaccccactgaacatagtgacaccccgcaggtc
aaatag
DBGET
integrated database retrieval system
