Oncorhynchus tshawytscha (Chinook salmon): 112253979
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Entry
112253979 CDS
T05605
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X2
KO
K20307
trafficking protein particle complex subunit 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112253979
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112253979
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10
Foie-gras_1
SNAP
TPR_7
Motif
Other DBs
NCBI-GeneID:
112253979
NCBI-ProteinID:
XP_024281916
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Position
LG07:11799702..11817304
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AA seq
1274 aa
AA seq
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MEAHEEKPIIYTMENKPIVTCAGDQSLFTSLYTSLAQQLPRESMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKDGNRALLTFPFLHIYWTDCCDTEMYKASVKDDMLRWQSTLRLHGSVD
WLIVVVESEAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKESSRSQDSWSAF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCAPVKRWSGLLLRRPIDMEKRELIQRGEAS
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVYVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANCSHTVGLWTYATEKLKSLGYLCGLVAEKVPTSEDLNRTVDL
LAGLGEERPETVNSLQSPYKKLNEALSSVEAFEKHYLELSHAAMEMYRAIGRMRSARLIG
KSLAEFYMKKGDPERAEGFLDDSLRSYVAEGWRLQVTHTRKQMAECQKLLQQTEDYLQTS
ALLAGDANLTEEERKHFCQEILTFASQPPAPSDQTVALSMAAFAQLRQMQFSPPGAVVHV
GAALQLELRVRCLMPVAMQVEQLAATLHFSLEQGGARGRAGSAQRRAGHGPQGQGDGVVM
FPQGSPLAGAGMGASLPPALELYEMQDRSPSDSSLTSTGVVCKNMHLLLRRHDSSASLDT
PTAGALPAAVAVDDGAQMLRARDITLQPGDNSILFTAPTGEPGSYTLRQLCGSVGRVQFV
QSHIYPVVQYEVYSQEPQLTIEPLSDNLLAGIPQKVTFTIATGHYSVKKGDALQLSNTDS
MPILHSSCCSATVLSSTGERMGESALSIQSSEKVTSISLPPTPPYHTLEFQLEVLCHIPP
TPFKPDIERLTNGEVRHRPKSHSHVDSGMINIDQKVSIDCPWSIYSTLIALTFYVPFKAK
HSILSAGKRKYIQVCLQNVSDTNFHLADPVLTERQPTVSMELLSLNVKTQQPVCSQQSVF
CLWEMRWAKPLPLCLQCAFSASFAPVSASDTHTAFKPYRYEFQLDRVSTLYSLKAEISPP
SGDQHCRTGALCGLEVSITRQAEPSETEGEEEESTEIEGLRTTKLMYEVVDNSSNWAVCG
KSSGVVSMPVAASATHRVQMEVMPLFAGHLPFPNIKVFKYLPHNAVPAIQPDTDSCLEND
TISLLDKGLDDQGDTASIRSRGSVHSVGSGEQQRGLPMPRLEPFSPGQVFYWSQGRQVLV
LPVTDDHVMEVNVT
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccatgaagaaaagccaataatctacactatggaaaacaagccgattgtgaca
tgtgctggcgaccagagcctgttcacttctctctacacctctctggcacagcagttaccc
agggagtccatggagtggaggaggtcctacggacgcgcaccaaagatgattcacctcgag
gccaactttgttcagttcaaagaggagctacttcctaaggatggaaacagagccctgctc
acctttcccttcctgcacatatactggacagactgttgtgacactgagatgtacaaggcg
tcggtgaaggatgacatgctgcggtggcagagcaccctgcggctgcacggctcggtggac
tggctcatcgtggtggtggagagcgaagccaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtggacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtggttctgtcggaccctctgaaggagtcgtctcggtcccaggattcgtggagcgccttc
ctgaccaagctgcgcaccttgctactcatgtccttcaccaagaacctgggccgtttcgag
gatgacatgcgcactctccgcgagaaacgcactgagcccggctggagcttctgcgactac
ttcatggtgcaggaggagttggcctttgtgttcgagatgctgcagcagtttgaggatgcc
ctggtccagtacgatgagctggacgctctcttcactcagtatgtcctcaactttggggct
ggagacggggccaactggctgggctcgttctgtgccccggtgaagcgctggagcggcctg
ctcctgcggcggcccatcgacatggagaagcgcgagctgatccagcgcggcgaagccagc
ctgctggacctgcgcagctacttgttctcccgccagtgtaccctgctcatcttcctccag
aggccctgggaggtcacccagcgagccctggagctgctgcacaattgcgtccaggagctg
cgcctgctcgaggtgtatgtggtccagggggcgttggactgctgggtgtttctcagctgt
ctggaagtgctccacaggatcgagggctgctgcgaccgcgcccagctagaggccaactgc
tcccacactgtcggcttgtggacctacgccacggagaagctaaagtctctgggctacctg
tgtggcctcgttgccgagaaggtccccacctccgaggacctaaaccgcaccgtggacctt
ttggctggcctgggggaagagagaccagagacggtcaacagcctgcagagcccttacaaa
aaactcaatgaggccttatcgtctgtggaggcatttgaaaaacactatctggagctgtct
catgctgctatggagatgtacagagccataggcaggatgcgctcagcccgactcattggg
aagagtctagctgagttttacatgaagaaaggtgacccggagagagcagagggcttcctt
gatgactctctgaggtcatacgtggcagaggggtggagactgcaggtgactcataccagg
aagcagatggccgagtgtcagaagctcctgcagcagactgaagactacctgcagaccagt
gccttgctggcgggcgacgccaacctgacagaggaggagaggaagcacttctgccaggag
atccttaccttcgccagccagcccccggcaccctcagaccagactgtggctctgagcatg
gcggcgttcgcccagctgcgccagatgcagttcagcccgcctggcgccgtggtgcacgtg
ggtgccgccctgcagctggagctgcgcgtgcgctgcctgatgcctgtggccatgcaggtg
gagcagctggctgccactctccacttcagcctggagcagggcggggcgaggggccgtgcg
ggtagcgcccagaggagggcgggccatggaccacaaggccagggggacggggtggtcatg
ttcccccagggaagccccctagctggggccgggatgggggcttcgctacctcccgccctg
gagctttacgaaatgcaggaccgcagtccgtcggacagctcgctcacctccacgggggtg
gtgtgtaagaacatgcacctgctgctgcggcgccacgacagctccgcctccctagacacg
cccaccgccggggccctcccggcagcggtcgccgtggacgacggggcccagatgttgagg
gcacgcgacataactctgcagcccggcgacaacagcatcttgttcacggcccctactgga
gagccgggctcgtacacgttacgtcagctgtgcgggagcgtggggagagtccagtttgtc
cagtctcacatctaccctgtggtgcagtacgaggtctactcccaggagcctcagctcacc
atcgagcccctctcagacaacctgttggcaggcattccccagaaggtgacgttcaccata
gcaacaggccactacagtgtgaagaagggtgacgcgttgcagcttagcaatacagactcc
atgcccatcctccactctagctgctgctctgctaccgtcctgtccagcacgggagagcgc
atgggggagagtgctctttccatccagtcatcggagaaggtgaccagcatctccctgccc
cccacccctccctaccacaccctggagttccagctggaggtgctgtgccacatccccccc
acgcccttcaagcccgacattgagcgtctcaccaacggcgaggtccgccaccggcccaag
agccacagccacgtagacagtggcatgatcaacatcgaccaaaaggtctccatcgactgt
ccttggtccatctactccactctcatagccctaaccttctatgtccctttcaaagccaag
cactcaatactctctgctgggaaaaggaagtacatacaggtgtgtctccagaacgtgtcc
gacacaaacttccacctggcggacccggtcctcacagagcgccagcccacagtctcgatg
gagctgctctcactcaatgttaaaacgcaacagccggtgtgcagtcagcaatcagtgttc
tgcctgtgggagatgcgttgggccaaacccctcccgctgtgcctgcagtgtgcattctcc
gccagcttcgcgcccgtctccgcctcggacacacacacagccttcaaaccctaccgctat
gagttccagctggaccgggtctctaccctttacagcttgaaggccgagatctcgccgccg
tccggggaccagcactgtcgcaccggcgccctctgtggcctcgaggtgtccatcacacgg
caggcggagcccagcgagacggaaggggaggaggaggagtctacggaaatagagggcctg
aggaccaccaagcttatgtatgaagtggtggacaacagcagtaactgggcggtgtgtggc
aagagctcgggggtggtgtccatgcccgtggctgccagcgccacacacagggttcagatg
gaggtcatgcccctgttcgccggtcacctgcccttccccaacatcaaagtgttcaagtac
ctgccccacaatgccgtcccagccattcagcccgacacggacagctgcttagagaacgac
accatttccctgctggacaaagggctggacgaccagggcgacacagccagcatccgcagc
cggggcagcgtccactcggtgggcagcggggagcagcagaggggtctgcccatgccccgc
ctggagcccttcagtccgggacaggtgttctattggagccaggggcggcaggtgctggtg
ctgcccgttactgatgaccacgtgatggaggttaacgtcacatga
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