Oncorhynchus tshawytscha (Chinook salmon): 112254014
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Entry
112254014 CDS
T05605
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
KO
K04520
amyloid beta A4 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112254014 (appa)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112254014 (appa)
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112254014 (appa)
Peptidases and inhibitors [BR:
otw01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
112254014 (appa)
Proteoglycans [BR:
otw00535
]
Cell surface proteoglycans
Others
112254014 (appa)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Others
112254014 (appa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
HTH_Tnp_Mu_1
CDC45
Motif
Other DBs
NCBI-GeneID:
112254014
NCBI-ProteinID:
XP_024281985
LinkDB
All DBs
Position
LG07:complement(13469138..13514315)
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AA seq
778 aa
AA seq
DB search
MGDRMALLLLVVATTALAVEVPTDGGMGLLAEPQVAMFCGKLNMHVDVQSGKWESDPSGT
KSCIGTKEGILQYCQEVYPELQITNVVEANQPVSVQNWCKKGRKQCRSHLHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRTLNLHDYGMLLPCGIDRF
RGVEFVCCPSDRETDSTEQDEDDSDVWWGGAETDYTDNSMERGAAKPAGFTPQQQQEEEE
TEETAPAMVEEEEEDDDDEEEGQEVLDNDQDGDGNEDEEEEDDDDVIDERDDSEPTTNIA
MTTTTTTTTESVEEVVREVCWANAETGPCRAMLARWYFDREEGRCAQFIYGGCGGNRNNF
ESEEYCLSVCSNVMPTATPSPPDAVDRYLETPGDDNEHAHFAKAKESLEAKHRERMSQVM
REWEEAEREAKSLPRADKKAVIQRFQEKVEALEQEAASERQQLVETHMARVEALLNDRRR
LALESYLTSLQAQPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRPQV
LTHLRVIEERMNQSLGLLYKVPGVADDIQDQVELLQKEQADMAQQLSNLQSDVRVSYGND
ALMPDSLPDSTRASLDLLPQEEDLGMGLDGLGFIHPESFNQVNTDNQVEPVDAHPIPDRD
FPTRPVSGLKPEEIPELRMEAEERHSTGFEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVI
ATVIVITLVMLRKKQYTSIHHGVIEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccgtatggctttgttgctgctggttgttgcgaccacggcgttagcagttgag
gtgccgacagatggtgggatgggcctgctggcggagccccaggtggccatgttctgtggg
aagctcaacatgcatgtggatgtccagagcggcaaatgggagtcagacccctccggcacc
aagagctgtatcggcaccaaggagggcatcctgcagtactgtcaggaggtataccctgag
ctgcagatcaccaacgtggtggaggccaaccagccagtcagcgtccagaactggtgcaag
aagggccgcaagcagtgccgcagtcacctgcacatcgtggtgccctaccgatgcctagtg
ggggagtttgtcagtgatgccctgctggttcctgataagtgcaagttcctgcaccaggag
cgcatggacatgtgtgagagccacctgcactggcacactgtggccaaagagtcctgtgga
gaccgcactttgaatctccatgactacgggatgctgttgccgtgcggcattgaccgtttc
cggggggtggagtttgtgtgctgtccgtcagacagggagaccgacagcactgagcaggac
gaggacgactcggatgtgtggtggggaggagccgagacggactacactgacaacagtatg
gaaaggggggcagcaaagccagctgggttcacaccccagcagcaacaggaggaggaggag
acagaggagaccgcccctgccatggtagaggaggaggaagaagatgatgatgatgaggaa
gaggggcaggaggtgctggacaatgaccaggatggagacgggaacgaggacgaggaggag
gaggatgatgacgacgtcattgacgagcgcgacgatagtgagcccaccaccaacatcgcc
atgactaccaccactactactaccactgagtctgtggaggaagtggtcagagaggtgtgt
tgggcgaatgcggagacgggcccatgccgtgccatgcttgcacgctggtactttgaccgc
gaggagggccgctgtgcccagttcatctatggcggctgcgggggcaaccgcaataacttt
gagtcggaggagtactgcctgtctgtatgcagcaacgtcatgcccaccgccacccccagc
cctcccgacgccgtggaccgttatctggagacgcccggggatgacaacgaacacgcccac
tttgccaaggccaaggagagcctggaggccaaacaccgcgagaggatgtcccaggtgatg
agggagtgggaggaggccgagagggaggccaagagtctacctcgtgctgataagaaggct
gtcatccagcgtttccaggagaaggtggaggccctggagcaggaggcagccagtgagagg
cagcagctggttgagacccacatggcccgggttgaggccctgctcaatgaccgccgtcgc
ctggccctggagagctacctgacctccctgcaggcccaaccacccaggcctcgtcatgtg
ttcagcctattgaagaagtatgtccgtgcagagcagaaggacagacagcacacccttaaa
cactttgagcacgtccgcatggtcgaccccaagaaggccgcacagatccgaccccaggta
ttgacccacctgcgtgtgattgaggagaggatgaaccagtccctgggcctgctctacaag
gtgcccggagtggccgacgatatccaggaccaagttgagttgctgcagaaggagcaggca
gatatggcccagcagctgtccaacctgcagagtgatgtgcgggtgagctacggcaatgat
gccctgatgcctgacagtcttccagacagcaccagggcctccctggacctgctgccccag
gaagaagacctgggcatgggcctggacggactgggctttatccaccccgagagcttcaac
caggtcaacaccgataaccaggttgagcctgtggatgcccaccctattcctgatagagac
tttccaacacgaccagtgtctggtctgaagccagaggagatccctgagctcaggatggag
gcagaggagaggcacagcaccggattcgaagtgcaccaccagaaactggtgttcttcgcc
gaggatgtcggctctaacaagggtgccatcatcgggctgatggtgggaggcgttgtcata
gcgaccgtcatcgtcatcaccctggtgatgctgaggaagaagcagtacacatccatccac
catggagtcatcgaggtggatgcagcagtcacccctgaggagcgccacctgtccaaaatg
cagcagaacggctatgagaaccccacctacaagtttttcgagcagatgcagaactga
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