Oncorhynchus tshawytscha (Chinook salmon): 112254021
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Entry
112254021 CDS
T05605
Symbol
gart
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3 isoform X1
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00230
Purine metabolism
otw00670
One carbon pool by folate
otw01100
Metabolic pathways
Module
otw_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
112254021 (gart)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
112254021 (gart)
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
112254021 (gart)
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
112254021 (gart)
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
112254021 (gart)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
Dala_Dala_lig_C
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
112254021
NCBI-ProteinID:
XP_042180081
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All DBs
Position
LG07:complement(14051214..14075364)
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AA seq
1021 aa
AA seq
DB search
MAVRLLVIGSGGREHTLAWKLAQSPHIQQVLVAPGNAGTANCGKISNSEVSVSNHSILAQ
FCKEHSVGLVVVGPEVPLAAGMVDDLQAAGVPCFGPSAKAAQLEASKSFSKAFMDRHGIP
TANWCSFTDPHEACSYIRTASFPALVVKASGLAAGKGVIVAKDQEEACQAVLDIMKDKTF
GSAGETVVVEELLEGEEVSCLCFSDGCSVSPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVSQELLQQIRETVLQKTVDGMKEEGTPYVGVLYAGLMLTKQGLKVLEFNCRFGDPECQV
LMPLLKSDLYEVLQSTLEGKLASSPPEWHQDRSAVTVVMASPGYPGSYKKGVAITGLSQV
EETGVQVFHAGTSLKEGGVVSSGGRVLTVTAVRSSLEMALHAANRGVAAVGFPGAVYRRD
IGHRGIAHLTQHSRGLTYKDSGVDIAAGNRLVDMIKPFAKATSRSGCNAELGGFAGLFDL
KAAGFIDPILVSGTDGVGTKLTIAQACQQHSTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGRLDVGVASAVIRGVAEACGLAGCALLGGETAEMPGVYGPGEYDLAGFCVGAVERGALL
PRLGDICEGDLLIGVASSGVHSNGFSLVRKVLERAGVTYSSPAPFGKPGQTVGEVLLTPT
KIYSRLLLPILRSGAIKAYAHITGGGLLENIPRVLPQELSVDLDASRWIIPPVFSWLQEE
GGLCEEEMGRTFNCGLGAVLVVAFPDAQSVLRKLQAHEDAWIVGSLAHKQPGAEPVVIRN
LKHSLRLGPSPCVVDLGPMQNGASQGDSSSTVPRKRTRVGVLISGTGTNLQALMEQTKRT
SSSAEIVVVISNQPGVLGLKRASLAGIQTRVVDHKLYGSRAEFDGTIDHVLEEFDVEVVC
LAGFMRILTGSFVRKWNGKLLNIHPSLLPSFKGVNAQKQALQAGARVSGCTVHFVAEEVD
AGAIIAQEAVPVLMNDTEESLSDRIREAEHRAFPAALELVAAGGVRLGDDGRIIWNPNAQ
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcggttgctggtgattggcagtggtgggcgggaacacaccttggcatggaag
ctggcacagtcaccacacatccagcaggtcctggtggcaccagggaacgctggcaccgcc
aactgtggaaagatctccaactctgaggtgtctgtgagtaatcactccatcctggctcag
ttctgtaaggagcatagcgtggggctggtggtggtagggcccgaggtgcctctcgcagca
ggcatggtagatgacttgcaagcggcaggggtcccgtgtttcggcccctcagcgaaggct
gcccagctggaggccagtaagagtttctccaaggcctttatggaccgtcacggcatcccc
acagccaactggtgctccttcaccgacccccacgaagcctgcagctacatccgcacggcc
agttttcctgctctggtggtgaaagccagcggcctggctgcagggaagggtgtcattgtg
gccaaggaccaggaggaggcctgccaggctgtgctggacataatgaaggacaaaacgttc
ggctctgccggggagactgtggtggtggaggaactactggagggagaagaagtgtcttgt
ctgtgtttcagtgatggctgcagtgtgtcccccatgcccccggcccaggaccacaaacgc
ctgcaggacggggacctgggccccaacacaggcggcatgggggcctactgccccaccccc
caggtgtctcaggagcttttgcagcagatcagagagactgtcctccagaagactgtggat
ggcatgaaggaggagggaaccccctatgtgggtgtgctgtatgctgggctgatgttgacc
aagcaggggctgaaggtcctagagtttaactgtcgcttcggcgacccagagtgtcaggtg
ctgatgcccttgctgaagagtgacctgtatgaggtgctccagagcaccctggaggggaag
ttggcatccagtccacctgagtggcaccaggacaggtctgcagttactgtggtcatggcc
agccctggctaccccggctcctataagaaaggtgtcgcaatcactggtctgtctcaggtg
gaggagacaggggtgcaggtgttccacgccggcacgtcgctgaaggaagggggtgttgtc
tccagcggggggcgtgtcctcactgtcaccgctgttaggtcgtctctggagatggccctg
cacgcagccaatcggggtgtggccgccgtggggttcccgggagccgtgtaccgacgtgac
atcggtcaccgaggcattgcccacctcacccagcacagcagaggcctaacttataaggac
agcggagtggacatcgccgcgggaaatcgactggtagacatgatcaagccatttgccaag
gccacctctcgctcagggtgtaacgctgagctggggggcttcgccgggctctttgatctc
aaagctgcaggcttcatcgaccccatcctggtgtctgggacagacggagtagggaccaag
ctcacgattgcccaggcatgccagcagcacagcaccctgggacaggacctggtggccatg
tgtgtcaacgacgtgctggcccagggggcggagcctctcttcttcctggactacttctcc
tgtggccgtctggatgtgggagtggcctccgccgtgatcaggggcgtggccgaggcctgc
gggttggcgggctgcgctctgctgggcggggagactgcggagatgcctggcgtgtacggc
cccggcgagtacgacctggcagggttctgtgttggggcggtggagaggggcgccctgcta
cccaggctgggggacatctgcgagggggacctactcatcggggtggcctcctcgggggtg
cacagcaacggattcagcctggttcggaaggtcctggagagggcaggagtcacctacagc
tcccctgcacctttcgggaaacctggacaaaccgtgggcgaggttctcctgacgcctact
aagatctacagccgcctgctcctgccaatcttgcgcagcggcgccatcaaggcctatgcc
cacatcactgggggcggcctattggagaacatcccccgagtgctgcctcaggaactgtcc
gttgacctggacgcctcccgttggatcatccctcctgtgttctcatggctccaggaggag
gggggcttgtgcgaggaggagatggggcgcaccttcaactgtggccttggggccgtgctg
gtggtggcctttccggatgcccagagtgttctgaggaagctccaagcccacgaggatgcg
tggatcgtgggctcgctggcccacaagcagcctggggccgagccggtggtgatcaggaac
ctcaagcacagcctgcgtttaggcccctctccctgtgtagtagacctggggcccatgcag
aacggagcatctcaaggggacagcagtagcaccgtcccccgcaagaggaccagggtgggc
gtcctcatctcaggcacaggcaccaacctgcaggcgctgatggagcagaccaagagaacg
tccagctcagcagagatcgtggtggtgatctccaaccagccgggggttttgggcctcaaa
agggcctctctggctggcattcagacacgggtggttgaccataagctgtacggtagccgg
gcagagtttgacggcaccattgaccacgtgctggaggaatttgatgtggaggtggtgtgt
ctcgccggcttcatgaggatcctcacagggtccttcgtcaggaagtggaacggaaaactg
ctgaacatccatccgtccctgctgccctcattcaagggggtgaatgcccagaagcaggct
ctgcaggcgggggcacgggtctctggctgcaccgtccactttgtggctgaagaggttgat
gccggggccatcattgctcaggaggcagtgccggtgttgatgaatgatactgaggagagt
ctatcagatcgcatccgggaggcagagcaccgggccttccctgccgccctggagctggtg
gccgcgggcggcgtgaggctgggggatgacggacgcatcatctggaaccccaacgcacag
ggctaa
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