Oncorhynchus tshawytscha (Chinook salmon): 112254023
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Entry
112254023 CDS
T05605
Name
(RefSeq) neural cell adhesion molecule 2 isoform X1
KO
K06491
neural cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03265
Virion - Ebolavirus and Lyssavirus
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
112254023
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112254023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254023
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112254023
04090 CD molecules [BR:
otw04090
]
112254023
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112254023
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112254023
Membrane trafficking [BR:
otw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
112254023
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
NCAM1/2
112254023
CD molecules [BR:
otw04090
]
Proteins
112254023
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
112254023
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112254023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_6
Pur_ac_phosph_N
Izumo-Ig
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
112254023
NCBI-ProteinID:
XP_024281998
LinkDB
All DBs
Position
LG07:complement(14223596..14618169)
Genome browser
AA seq
839 aa
AA seq
DB search
MILQLLWFLVCGSQAVLQVSISLNKVELSVGESKFFKCTVIGEPVKLEWFNPQGERIVSS
QRVALHTGEDSSRLTIYNAVVEDAGIYRCQTTDAQGQTQEATMVLEMYQKLTFRDVRSPQ
EFRHGEAAEVVCDVIASPAPAVSWFYQKGFKSMEITEEHYSRFQVLPNNNLQIHKVTKAD
EGVYRCEARVEARGEIDFVDIEVVVNVPPVLSILQQSFNATADYQESVTFTCVTSGSPDP
DVTWHRKGQRLQRSEQYVLNTMEGGRSTLTIRNIIQGDGGGYTCRATNKAGAEERELFLK
VFVQPHITQLRNVTAVEGSAAMISCVAEGEPLPEISWRRANDGRSFTDGDKSQDGRMDVR
GRHGKSMLTISGVKLTDLGRFDCEALSRIGGHQKSMFLDIEYMPKFQTNQTIFYSWEGNP
VNISCDVKSNPPATMLWRRERLTISAEGTANTRVHTIDGKSLLEVTPVSDRDFGRYNCTA
RNNIGAKYQEFILAQADVPSNPYSVRLSAVSQRIATVTFMKPDSHGGVPIGHYLVNYKDV
GSQDWRDVKSHGVQTIVLLTGLEPNTTYEVRVAAVNGKGQGEFSHTESFQTLPIREPSPP
AVHGQRGMGKAYRLGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVSGQQDFALLQPLQW
NTRYEVEITARNVKGLSEPTFYQFFMPQKPDIIADSLFSGLGLGPVVGLGLVVLLLVLVV
VDVSCYFLRQCGLLMCITRKLCSKKTATSGKSKEMEEGKAAYLGDGSKDPIVEMRTEEER
ITNHDGSPVHEPNETTPLTEPEKLPLKEENGKETLKPDMIEIKVHSDNSIHTKQDDSKA
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgattctccaactcctatggtttcttgtctgcggcagtcaagctgttctgcaggtgtcc
atatccttgaacaaggtggagctaagtgtgggagagtccaagttcttcaaatgcacagtg
atcggcgagccagtgaagttggagtggtttaacccccagggggagcgcatcgtgtcgtcc
cagcgtgtggccctgcacaccggggaggacagctccaggctgaccatctacaacgctgta
gtggaggacgcgggcatctaccgctgccagaccaccgacgcccagggacagacacaggag
gccaccatggtgctggagatgtaccagaagctgacattccgcgacgtgaggtccccccag
gagttccgccatggcgaggcggcagaggtggtgtgtgatgtcatcgcctcgccggcaccc
gcggtctcttggttctaccaaaagggctttaagagcatggagatcacagaggagcactac
agcaggttccaggtgctgcccaacaacaacctgcagatccacaaggtgaccaaggcggac
gagggcgtgtaccgctgcgaagcgcgagtggaggcccgcggcgagatcgactttgttgac
atcgaggtggtggtgaatgttcctcctgtgctgtcgatactacagcagtcattcaatgcc
acagcagactaccaggagtcagtgactttcacctgcgtcacatcgggatcccctgacccc
gatgtcacctggcacaggaagggccagaggttgcagaggtcggagcagtatgtcctcaac
accatggagggaggcaggagtaccctgaccatccgcaacatcatccaaggggacgggggc
ggctatacctgccgagccaccaacaaggccggggcggaggagagggagctcttcctcaaa
gtgttcgtccagccacacatcacccagctgcgtaacgtgacggcggtagagggcagcgcc
gccatgatctcctgcgtggccgagggtgagccgctgcctgagatctcctggaggagagcc
aacgatggtcggagcttcaccgacggagacaagagccaagatggacgtatggatgtgcgg
ggccgccatggcaagtccatgttgaccatcagtggggtgaagcttactgacttgggacgt
tttgactgtgaggccctcagcaggatcgggggccaccaaaagagcatgttcctcgatata
gagtacatgcccaagttccagaccaaccaaaccatcttttactcgtgggagggcaacccg
gtaaacatcagctgtgacgtcaagtccaacccgcccgccaccatgctatggaggagagaa
cgcctcaccatctcggccgaaggcactgccaacacacgtgtccacacaatcgacggcaag
tccctgctagaggtcaccccagtgtccgacagggatttcggacgctacaactgcacggca
cgtaacaacatcggagcgaaataccaggagttcatcttggcccaggcagacgtgccctcg
aacccgtactcggtgcgcttgtcggccgtgtcgcagcgcatcgccacggtgacattcatg
aaacccgactcacatggcggtgtacccattggccactacctggtcaactacaaggatgtg
ggctcgcaggactggagagacgtcaagtctcatggtgtccagacgatagtactgctgaca
ggcctagagcccaacaccacctatgaagtgcgagtggctgcagtcaatgggaagggccag
ggggagttcagccatacggagtccttccagactctacccatacgtgagcccagcccccca
gcagtgcatggccagagagggatggggaaggcctaccggctgggccttgtcaagcaagac
gacgggggcatgcccatcgtggaatacattgtcaagtacaagacggacaaggaggagcag
tggatgacgaagctggtgtcggggcagcaagactttgccctgctgcagccgctgcagtgg
aacacgcgctatgaggtggagatcacggctcgcaacgtcaagggcctctcggagcccacc
ttttaccagttcttcatgccccagaaaccagacatcatagcagactccctgttcagcggc
ctggggctggggcctgtggtgggcctgggtctggtcgtactcctcctggtcctcgtggtg
gtggacgtcagctgctacttcctgcgccagtgtggcctgctcatgtgtatcacgcgcaag
ctctgcagcaagaagactgccaccagcggcaagagcaaggagatggaggagggcaaggcc
gcctacctgggcgatgggtccaaggatcctatcgttgagatgagaacggaagaggagaga
ataactaaccacgatgggagcccagtgcacgaacccaacgagactacacctctcacagag
ccagagaagctaccgctgaaggaggagaacgggaaggagacgctcaagcccgacatgatc
gagatcaaagtgcacagtgataacagcatccacacaaagcaggacgacagtaaagcataa
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