Oncorhynchus tshawytscha (Chinook salmon): 112254123
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Entry
112254123 CDS
T05605
Name
(RefSeq) RNA-binding protein 12
KO
K24526
RNA-binding protein 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112254123
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112254123
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
112254123
NCBI-ProteinID:
XP_042180945
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All DBs
Position
LG07:20548459..20551083
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AA seq
874 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGAIKGSKVSLLLSSKTEMQNMIELSRRRFETGNVEGAAGNGSRPGPTVRTGGRGSLPTT
LQGFSNTTPTTVTTAASAHETISNKNVSTFATTGMGNMPPSFSNNFSSPNLTMGSTMTTA
MSSLNSVPPPIPPLPTMPSLPPMPSIPPMPLPPPVSSMPPVPTVSPLTQGPPVLPMSHLS
HMGSMPPFNPGIPPPGGLASGLPLGTPNHMFLGHMNPLLNIQAHMKAAIGNSDELYVHLQ
GLPFSGTEMDIREFFRGLAVDSIRLVRDNMGRSSGRALAKFFSPQDTFEALKRSTGMLGQ
RYVDISPATERQWMSVSSGGIGVGGQAHSKFNNEPQDQHRRSNMSSASPSTRDRARSRSP
HNKEFCVYLKGLPYEAVNKQICEFFKNLDIVEDSIYIAYGPTGRATGEGFVEFKNEMDYK
VALGCHMQYMGSRFIQVHPISKNAMFEKIGSIRQRMQGGDKKNNSESVKSPRNCAHISNI
PYNVSKKDVRLFLDGISVFDESLKVLVDSSGNGLGQAVMQFRAEEDALNAERLHRQKLNG
RDAFVHLITFEQMKEIERNPPPQVKRGQKPQGNTQGQAHSHVQAQNPVQGHPFAGMTGDE
FNFLRNTVGNLGNGPFTPFTVPGNGLVGPPPPPLAASLGDVALSIPPPMVAGHLPGAVLE
PPGFRPGSNNGPPGFGPEGLRGMPPFDNGPRKSRGLNHNNRGGGHGQSGGCPQSAFGPGS
DPLRGQSTGGPGNPRGPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSVCLQFSEKGLPTG
EAMVAFESHKEATSAVMDLNDRPIGARKVKITLG
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcagggtctcccgatagtggcgggcaccatggacatacgc
catttcttctctggattgactatcccggatggtggggtgcatattgtagggggtgaacat
ggtgaggcttttattgttttcgccacagatgaagatgccaggcttggcatgatgcgtaca
gggggagcaatcaaaggttctaaagtgtcacttttgctgagcagcaagacagagatgcag
aatatgatcgaacttagccgcaggcgttttgaaacaggcaatgtggagggagccgcagga
aacggtagcaggccaggccccacggttcgcacaggtgggaggggcagtttacccaccact
ttacaaggcttcagcaacaccacaccaaccacagtcaccacagctgcatctgcacatgaa
actataagcaacaaaaatgtgtccacgtttgccacaactggcatgggaaacatgcccccc
agtttcagcaacaacttcagcagcccaaatcttaccatgggatccactatgacaacagcc
atgtcctccctcaactctgtaccaccacctatcccccctttgccaaccatgccatccctt
ccacccatgccttccataccccccatgccccttccaccacctgtgtcctctatgcctcct
gttcccactgtgtcacctttaacccaaggcccccctgtccttcccatgagtcatctgtcc
cacatgggctcaatgccaccatttaacccaggcatcccaccccctggtggactggcctca
gggctgcctctaggaaccccaaaccacatgtttctgggccatatgaaccctctgttaaat
atccaggcacacatgaaggcagcaataggtaattcagatgagttatatgtccaccttcaa
ggcctgcccttctcaggtacagaaatggatattagggagtttttccgtgggttagcggtg
gactccatccgactggtcagggacaacatgggcaggagtagcggcagggcgctggccaag
ttcttttcccctcaggacacttttgaggcactcaaaagaagcaccggaatgttagggcaa
aggtatgttgacatctctccggccacagagaggcagtggatgagtgtcagcagtggtggc
atcggggttggagggcaagcccactcaaaattcaataatgagccgcaagaccagcaccgc
cgcagcaacatgagttcagcgtccccgtcaaccagagaccgtgcgaggtcccgttcccct
cacaacaaggagttctgtgtttacctgaaaggcctgccctatgaagcagtaaacaaacag
atctgtgagtttttcaaaaacttggatattgtggaagacagcatttacattgcttatgga
cccactggccgagctacaggcgagggctttgtcgagttcaaaaatgaaatggactacaaa
gttgcactcggctgtcacatgcagtatatgggtagccgattcatacaagttcaccccatc
agtaaaaatgctatgtttgaaaagattggttccattcgtcaaaggatgcagggtggtgat
aagaaaaacaactcagaatcagtcaagagccctagaaactgtgctcacatctcaaatatt
ccatataatgtgtcaaagaaagatgtccgtctgtttctagatggcatttcagtatttgac
gaaagtcttaaagttctggttgacagcagtggtaacggtctaggtcaggctgttatgcag
ttcagggcagaggaggatgcactaaatgctgagagactacacaggcagaagttaaatggc
agagatgcctttgtacatttgatcacctttgagcagatgaaggaaattgagagaaaccca
ccaccacaggttaaaagaggccagaaaccccaagggaacactcaaggccaggcacacagc
catgttcaggcacagaatccagttcaaggtcacccctttgccggtatgacaggagatgag
ttcaacttcctcagaaataccgtaggcaatttaggcaatggtccttttacgccgtttact
gtcccaggtaatggactagtgggcccccctccacccccacttgcagcaagtcttggggat
gtagcccttagcatacccccacccatggttgccggtcacttgcctggagcagttctggaa
cccccgggcttccgaccaggcagcaacaatggcccacctggctttgggccagagggattg
aggggcatgccaccttttgacaatggccctagaaagagcagaggcctcaaccacaacaac
cgaggaggtggccatgggcaatcaggagggtgtcctcagtctgcctttggccctggctct
gaccctctgagaggacaatcaaccggaggccctggtaaccctcgtggacctaccattgta
aagattcaaaacatgcctttcactgtaacagttgatgagattctcgatttcttttatggg
tatcaggtgctgcctggttcagtctgtctgcagttcagtgaaaagggcctgcccaccggt
gaggcaatggttgcctttgagtcacacaaggaggcaacatctgctgtcatggatttaaat
gataggcctattggggctaggaaagtgaagataaccctaggataa
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