Oncorhynchus tshawytscha (Chinook salmon): 112254196
Help
Entry
112254196 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional enhancer factor TEF-5
KO
K09448
transcriptional enhancer factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112254196
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
112254196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
Motif
Other DBs
NCBI-GeneID:
112254196
NCBI-ProteinID:
XP_042175199
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MDGDAEGVWSPDIEQSFQEALAIXPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRT
RKQVSSHLQVLARRKSREIQSKLKAMNLDQASKDKALQNMAALSSAQIVSPSLIKSQLPP
LPHSPYPPQARFWPGPIPGQPGPSQDIKPFAQSPYPNLPGPAPPPISTYEPLAPPLPPAA
TAVPVWQDRTIASSKLRMLEYSAFMEVQRDPDNYSKHLFVHIGQTNPSYSDPLLEAVDIR
QIYDKFPEKKGGLKELYEKGPQNAFFLVKFWADLNSSGMQDGPGSFYGVSSQYSSSENMT
ITVSTKVCSFGKQVVEKVETEYARMEGGKCVYRIHRSPMCEYMINFIHKLKHLPEKYMMN
SVLENFTILQVVTNRDTQETLLCIAFVFEVSTSEHGAQYHVYRLVKD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggacggggacgccgagggggtgtggagcccagacatagagcagagcttccaggaggcc
ctggccatcntacccccctgtggacggaggaaaatcatcctctcagacgaaggcaagatg
tacggtcgcaatgagttgatagccaggtacatcaagctgaggacaggcaaaacccgcaca
agaaagcaggtttctagccatttgcaagttctcgcccggagaaaatctcgcgagatccag
tcaaagctgaaggccatgaatttggaccaggcgtctaaagacaaggccctccagaacatg
gcagcactgtcgtctgctcagattgtgtcaccgagcctgatcaagagccagctacccccg
ctgccccattcaccctaccccccgcaagccaggttttggccaggccctatcccaggacaa
cctggcccctctcaggatatcaaaccttttgcacagtccccatacccaaacctaccaggc
cctgctcccccacctatatcaacctatgaacccttggcaccccccctccccccggctgct
acggcagtacccgtgtggcaggaccggaccatcgcctcctccaagctgcggatgctagag
tactctgcctttatggaggtgcagagggacccggacaactacagcaaacacctgtttgtc
cacattggtcagaccaacccttcctacagcgaccctctactggaggcagtggacatcagg
cagatctacgacaagttcccagagaagaaaggcggactcaaagagctttatgagaaaggc
ccccagaatgcctttttcctagtcaaattttgggcggatcttaacagcagtggcatgcag
gacggcccaggctccttctatggagtcagtagccagtacagcagctctgagaacatgacc
atcaccgtctccaccaaagtctgctccttcggcaaacaggtggtcgagaaagtagagacg
gagtacgcccgaatggaaggagggaagtgtgtctacagaatccaccgctctcccatgtgc
gagtacatgatcaactttatccacaagctcaaacacctgccagaaaaatacatgatgaat
agtgttctggaaaactttaccatccttcaggtggtgacaaaccgtgatactcaggagacc
ttgctgtgtatagcgtttgtgtttgaggtctcaacgagtgaacacggggcacagtaccac
gtctacaggcttgtcaaagactga
DBGET
integrated database retrieval system
