Oncorhynchus tshawytscha (Chinook salmon): 112254230
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Entry
112254230 CDS
T05605
Name
(RefSeq) RNA-binding protein 5-B-like isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112254230
Spliceosome [BR:
otw03041
]
Complex A
Other components
Complex A specific factors
112254230
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
G-patch
OCRE
RRM_1
Zn_ribbon_RanBP
G-patch_2
DUF7066
GSIII_N
zf-C2H2_4
Vit_open_b-sht
Motif
Other DBs
NCBI-GeneID:
112254230
NCBI-ProteinID:
XP_024282351
LinkDB
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Position
LG07:26549050..26560146
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AA seq
835 aa
AA seq
DB search
MGADKRVSRTERSGRYGGNNQGRGERRERGDQEREHVTRRWGEERRIERYDGGEHRGNRA
SPEQRDRKRRNNDGAEEGYHSDGDYPEQDYRGEPGEEKESKTIMLRGLSLHVTEGDVRAA
LDQLEGPQPIDVRLMKKRTGISRGFAFVEFYHLQDATRWMETNQKLLVIQGKSVAMHYSN
PRHKFEDWLCNTCGLYNFRRRLKCFRCGASKAECETNTTGVRETQQSGDYYGDTIILRNI
APLTTVEAIMTALAPYANLSTSNIRLIKDKQTGQNRGFTFVQLSSPLEASQLLTILQGLQ
PPLKLDGKTIGVDYAKSARKDLLLPDCNRISAFSVASTAIAAAQWSSSQPQQGAEGQLSE
YSYLEEGYVPYTQDYQAYYQQAAGDLSQGNGILGAAPAATGVVISQVAQVYQPRLISHTA
TQALQLAQQLEAKQTGVHSAAATITAPVSTATATLSGLATDTAVPDTSTYQYDESSGYYF
DPETGLYYDPNTHYYYNSQTQQYLYWDSEKQTYVPASAADQTEQTANAAAASKEAKESKE
RKQEKPKSKTAQQIAKDMERWAKSLNKQKENFKSSFQPVSQEERKEAAAADAGFTLFEKK
QAGSLEMLMSEAVQRPEEQAPTNSAKVGLVAAYSGDSDPEEGGAAEPERDGGEQGQDQLT
DWKKMACLLCRRQFPNKDGLVRHQQLSDLHKQNLEVHRRSKLSEAELEELERKETEMKYR
DRAAERREKYGIPEPPAPKKKKFTAQPAPVVNYEQPTKDGLNSDNIGNKMLQAMGWQEGR
GLGRNQQGITAPIEAQLRAKGAGLGTKGSSYGLSASDTYKDAVRKAMFARFTEME
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgataagcgggtgagtcgcacagagcgtagcggcagatacggcggcaacaat
cagggccggggtgagaggcgagagcgaggagaccaggaacgagagcacgtcacgcgacgc
tggggtgaagagagacgcatcgaacgctacgatggaggggaacaccgggggaacagagcc
agtccagagcagagagacaggaagcggcggaacaacgatggagctgaagaaggctaccac
tctgatggagactacccggagcaggactacaggggggagccaggggaggagaaggagagt
aaaaccatcatgctccggggcctgtctcttcacgtcacagagggagacgtccgagctgcc
ctggaccagctggagggaccccagccaatagatgtccggttgatgaagaagaggacaggt
ataagcagaggtttcgccttcgtggagttttatcacttgcaagatgctacccgatggatg
gagaccaatcagaaactcctggtcatccaaggcaagagtgtggccatgcactacagcaac
ccccggcacaagtttgaagactggctctgcaacacttgcggcctgtacaatttccggagg
aggctgaagtgcttcaggtgcggagcatccaaagctgagtgtgaaaccaacaccactgga
gtccgagagacccagcagagcggagactactacggcgacacgatcatccttaggaacatc
gccccccttaccactgtggaggccatcatgactgccctggccccctacgccaacctgtca
accagcaacatccgtctcatcaaggacaaacagacgggccagaacagaggcttcaccttc
gtacagctttcctcccctctggaggcttctcagctcctaactatcttacaaggactgcag
ccccctctcaagctggatgggaagaccatcggtgtggactatgccaagagtgccaggaag
gatctcttgctcccagactgtaaccggatcagtgccttctctgtggccagcacagccatc
gctgctgcccagtggtcctccagccagccacagcagggtgctgaaggacagctgtcggag
tacagctacctagaggagggctacgttccctacacacaggactaccaggcctactaccag
caggcagcaggagacctctcccaggggaacggaatactgggagcggccccagctgctaca
ggagtggtgatctcacaggttgcacaggtctaccaaccccgacttatcagtcacactgcc
acacaggcactgcaattggcccaacaactggaagcaaaacagaccggagttcactctgca
gctgcaaccattacagcgccggtttccacagcaacagcgacactctctggactggccaca
gacactgctgttcccgacacctccacctaccagtatgacgagtcctctggctactacttc
gaccctgaaactggcctctactacgacccaaatacccattactactataattcccaaaca
cagcagtacctgtactgggacagcgagaagcagacttacgtccctgcctcagccgccgac
caaactgagcagacggcaaacgcagcagcagctagcaaagaggctaaggaatccaaggag
aggaaacaagagaagcccaagagcaagacggctcaacagattgctaaggacatggagcgc
tgggcgaagagtctgaacaagcagaaggagaacttcaaaagcagcttccagcccgtcagc
caggaggagaggaaagaggccgcggccgccgacgcaggcttcacactcttcgagaagaag
caggctggaagcttggaaatgctcatgtcagaagcagtgcagcgcccagaggagcaggcc
ccaaccaactcagccaaggttggtctggtggcagcctacagtggggacagtgacccagag
gaggggggtgcagcagagccggagcgcgatggtggtgagcagggccaggatcagctgaca
gactggaagaagatggcctgcctgctgtgtaggagacagttccccaataaggacggcctg
gtgcgccaccagcagctctctgaccttcacaagcaaaacctggaggtccaccgcagatct
aagctgagtgaggctgagctggaagagctggagaggaaagagaccgagatgaagtacaga
gaccgggctgcggagaggagagagaaatacggcatccctgaacccccagcacccaaaaag
aagaaattcacagcacagccagcaccagtcgttaactatgagcaacccaccaaagacggt
ctgaacagtgacaacattgggaacaagatgctgcaggccatgggatggcaggaaggcaga
ggtctgggccgcaaccagcagggcatcactgctcctattgaggcccagctgagggcgaag
ggagctggtctgggaaccaaaggcagcagctacggcctgtctgcctcagacacttacaaa
gacgctgtccgcaaagccatgtttgcccgcttcactgaaatggagtga
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