Oncorhynchus tshawytscha (Chinook salmon): 112254289
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Entry
112254289 CDS
T05605
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112254289
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112254289
04261 Adrenergic signaling in cardiomyocytes
112254289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112254289
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112254289
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
dCache_2
MCP-like_PDC_1
Fe_dep_repress
Motif
Other DBs
NCBI-GeneID:
112254289
NCBI-ProteinID:
XP_042180168
UniProt:
A0AAZ3RJZ5
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Position
LG07:complement(27634760..27944395)
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AA seq
1112 aa
AA seq
DB search
MAICAQSYGILCMFSIQTVLIISVSSPATGSLRFPQHYTMMHWAGRIEKELEKTLQLVTG
AQQMKGIYNEKKSQFDIKRNNPKDLVERVARDIAKLLTSKRRALERLAREAEQLQTMYPW
QDGIKESDMEYYDSKAESDYTEDEDGEENLMENPYSVKLEFVDDPNFKNKVNYSYSAVQI
PTDIYKGSPVILNELNWTQALERVFIDNRREDSSLRWQVFGSSTGVTRYYPATPWRAPNK
IDLYDVRRRPWYIQGASSPKDMIIIVDVSGSVSGLTLKLMKSSVMQMLDTLSDDDYVNVA
RFNEKADAVVPCFKTLVQATMRNKKIFKESIMNMQAKGTTDYKSGFQFAFEQLLNDTGAP
RAGCNKMIMMFTDGGEDRAQDIFEKYNWPNKTIRVFTFSVGQHNYDVTPLQWIACANKGF
YYEIPSIGAIRINTQEYLDVLGRPMVLAGPKAKLVQWTNVYQDALGLGLVITGTMPVFNL
TADANSQTQLVLGVMGVDVAINEIKRKTPTYRLGANGYTYAIDKNGYLLLHPNLQPKIIN
FREPVTLDFLDAELEDSKKEEIRRDMIDGKSGNRKIKTLIKSVDERYIDEAMRTYTWTPV
EGTDYSLGLVLPTYSENHIKANLSDQILQVQYFESLLPNSFESEGHVFIAPREYCNELEL
SNNNTDFLLNFIALMEKVTPDSKQCDNLLLHNLILDTGIIRQLVEKVWKTKDLTTYGFLA
VFAATDGGITRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTLNDELLNPEN
DTIGILVSTAVEITVGGKTIKPAVVGVKLDLEAWVDKFKILASNQTSPTSDNRQVQQTCG
PTSGCEMDCDANSEDLLCYLVDDGGFLIMSNQKDYWNKIGMFFSEVDPYLMHALYNNSFY
NRKQSFDYQSVCDPVPSSNTGAAPRGVFVPTIADFVNLAWWTSAAAWSLFQQLLCGMAYH
SWFVTDEVEAEGMDSRETSCVTIQTQFYFTNINSSYDILQDCGNCSRLIHAKRLNNTNLL
FVVAEKMPCNTCELEKLSQAETEFKDDNPSCEDMSAARYRKGPTVCYDYNLAENTSDCGR
GHSFRPSFQTLLTIQLVLLYPIASTHILPLLL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctgcgctcagtcctacggtattctatgtatgttctcaatccaaactgtcctc
atcattagcgtctcttcgccggcaacggggagcctccgcttcccccagcactacacaatg
atgcattgggcaggccgtattgagaaggagctggagaagactctgcaactggttactgga
gcccagcagatgaaagggatttacaatgagaagaagagccagtttgacatcaagaggaac
aatcccaaggacctggtggagagggtggcacgagacatcgccaagctgctcactagcaag
aggagagccctggagaggctagccagagaggcggagcagctgcagacaatgtatccctgg
caggacggtatcaaggagagcgacatggagtactatgattcgaaagcggaatcagactat
acggaggatgaagacggggaagagaacctgatggagaacccctactccgtgaagctggag
tttgtggacgatcccaactttaaaaacaaagtgaactactcctacagcgccgtccagatc
cctacagacatctataagggctccccagtcatcctgaatgagctgaactggacccaggct
cttgagagggtgtttattgataaccgccgggaggacagctctctgcgctggcaggtgttc
ggcagctcgacgggggtcacaagatactacccagccactccttggagagcgcccaataag
attgacctgtatgacgtgcgcagacgaccatggtacatccaaggggcatcctctcccaag
gacatgatcatcattgtggatgtgagtggcagtgtcagtggactcaccctgaagctgatg
aagtcctctgtgatgcagatgctagacactctgtcagatgatgactatgtgaatgtagcc
aggtttaacgagaaggcagatgccgtggtcccctgctttaagaccttggtccaggccacc
atgagaaacaagaagatcttcaaggagtccatcatgaacatgcaagccaaaggaaccact
gactacaagtctggcttccagttcgccttcgaacagctactcaatgataccggcgccccg
agggcgggctgcaataagatgataatgatgtttacagatggaggagaggatcgtgcccag
gacatctttgagaagtacaactggcccaacaaaactattcgagtatttaccttttcagtc
gggcagcacaactatgatgtcacacctttgcagtggatagcttgtgccaacaaaggattc
tactacgagattccatccattggcgccatcagaattaacacgcaggagtacctggatgtg
ctgggtcggcccatggtgctggctgggcccaaggccaagctggtccaatggaccaacgtc
taccaggatgctctgggtctgggtctggtcatcaccgggaccatgccggtcttcaacctc
accgctgacgcaaactctcagactcagctcgtccttggtgtcatgggagtggatgttgcg
atcaacgaaattaagaggaagacgccaacgtataggcttggagccaatggatacacgtat
gcaattgacaaaaatggctatttgctcctgcaccccaacttacaacctaagatcattaac
ttcagagagcctgtcactctggacttcctggatgctgagctggaggacagtaaaaaggag
gagatccgtcgtgacatgattgatggaaaatcagggaataggaaaatcaagaccctcatt
aagtcagttgatgagaggtacattgatgaggctatgcggacatacacctggacaccggtg
gaaggcacagattacagtctcgggctggttctgcccacgtacagtgagaaccacatcaag
gctaacctgagtgaccagatcctgcaggtgcagtattttgaatctctgctgccaaacagt
tttgagtctgaaggacatgtattcatagctcccagggaatactgcaatgagctggagctc
tccaacaacaacactgacttcctgctcaacttcatcgctctcatggagaaggtgactccc
gactccaaacaatgtgacaacctgctccttcataacctcatcctggacacgggcatcatc
agacagctggtggagaaggtgtggaagaccaaagacctcaccacatatggctttttggca
gtgtttgctgcaacagatggagggattacaagagtttttcccaacaaggctgctgagacc
tgggaggaggaccctgagccttttaacgccagctattaccgccgtagtctggacaacaag
ggctacatcttcagagcgccttatcgcaccttgaatgatgagctgctgaatccagagaac
gacaccatagggatcctggtcagcactgcagtggagatcacagtgggagggaagacaatc
aaacctgcagtggttggagtaaagctggatcttgaggcctgggtggacaaattcaagatc
ctggctagcaaccaaacaagtccaacaagtgacaaccgccaagtccaacaaacgtgtgga
ccgaccagcggctgtgagatggactgtgacgccaacagcgaagacctgctgtgttacctg
gtggatgacggtggtttcctgatcatgtccaatcagaaggactactggaacaagattggc
atgttcttcagtgaggtggacccctacctgatgcatgctctctacaacaactccttttac
aaccggaagcagtcctttgactaccagtctgtgtgtgaccccgtgccgagcagcaacacc
ggggctgcaccaagaggcgtgtttgtgcccaccattgccgactttgtgaacctggcctgg
tggacatcagcagctgcctggtccctattccagcagctgctctgtggaatggcttaccac
agctggtttgtcacagatgaggtggaggcagaggggatggactccagagagaccagctgt
gtgacgatacagactcagttctacttcaccaacatcaacagttcctatgacatcctgcag
gactgtggcaactgctccaggctaatccatgccaagaggttaaacaacaccaacctgctg
tttgtggtagcagagaagatgccctgcaacacctgcgagttggagaaactgtcccaggcg
gagacagagttcaaggacgataacccatcatgtgaggatatgagtgcagcgaggtatcga
aaagggccaactgtgtgctacgactacaatctcgctgagaacacatctgactgcgggcgc
ggccactccttccgcccctccttccagaccctgctcacgattcagctcgtcctgctctat
ccaatcgccagcacccatattctgcccctcctactttaa
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