Oncorhynchus tshawytscha (Chinook salmon): 112254333
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Entry
112254333 CDS
T05605
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112254333 (ift52)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
112254333 (ift52)
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GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
Motif
Other DBs
NCBI-GeneID:
112254333
NCBI-ProteinID:
XP_024282547
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All DBs
Position
LG07:29165211..29171710
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AA seq
434 aa
AA seq
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MEKEQRSSVVFNASKRELFTANNGYKSLQKRLRAQWKIQSMKEELSLEKLNGVKLWITAG
PREKFTAAELEVLKQYLDGGGDVLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDESVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFYQVKEAGKLAVMGSCHMFSDQYLDKEENSKIMDVVFQWLM
GDNIILNQIDAEDPEITDYTMLPDTGCLSERLRVCLQEGEENPRDFTSLFDMSLLKLSTN
TLPQVISSYKQMNVKHEPLQLITPQFETPLPQLEPAVFPPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKDQRDAKHILEHIFFQVVEFKKLN
QEHDLDTETRFSPF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagcagcgcagcagtgttgtttttaacgcatccaagagagaactgttcact
gccaacaatggttacaagtccctgcagaagagactcagggcacaatggaagattcagagc
atgaaagaggagctctccttggagaagttgaatggtgtgaagttgtggattactgctggc
cccagggaaaagttcactgcagctgagttggaggtcctgaagcagtacctggatggggga
ggagatgtccttgtgatgctgggtgaaggaggggagatgaagtatgacaccaatatcaac
ttcctccttgaggagtttgggataatggtcaacaatgatgctgtcgtgaggaatgtttac
tacaagtatttccatccaaaagaagcacttgtgtccaatggtgttctgaacagagagatc
agtcgggctgcaggcaaagtggtgacggggatcatcgaagatgaaagtgtcgggaacaat
gcacaggccctcacatttgtgtacccgtatggagcgacactgagcgtgatgaagcctgct
gtggctgttctctccactgggtccgtctgcttccccctcaacaggcctgtcctcgccttc
tatcaggtcaaggaggcaggcaaactggcagtgatggggtcctgtcacatgttcagtgac
cagtacctggacaaagaggagaacagtaaaataatggatgtcgttttccagtggctcatg
ggtgataacattattctgaaccagatagatgcagaggaccccgagatcacagattacacc
atgctgccagacacaggctgcctgtctgagcgactgcgagtatgcttgcaagagggagag
gaaaatccaagagactttacctccctgtttgacatgtctctactcaaactatcaacaaac
acgttgccccaagtcatcagttcctacaagcagatgaatgttaaacacgagcctctccag
ctgatcacacctcagtttgagactccccttccacagctggagcctgctgtcttcccgcct
gccttcagggatctgcctccccccatgcttgacctctttgacctggatgaaaccttctct
tctgagaaggtgcgtttggcacagctctccaacaaatgcacagacgatgatctagagttc
tacgtgaggaagtgtggggacatcttgggggtgacggggaagttggataaagatcagagg
gatgccaaacacatcctggagcacatcttcttccaggttgtggagttcaagaagctcaat
caggaacatgatcttgacacagagaccaggttttccccgttctga
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