Oncorhynchus tshawytscha (Chinook salmon): 112254343
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Entry
112254343 CDS
T05605
Symbol
cntn3b
Name
(RefSeq) contactin-3
KO
K06761
contactin 3/4/5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112254343 (cntn3b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112254343 (cntn3b)
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Contactins
112254343 (cntn3b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112254343 (cntn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
112254343
NCBI-ProteinID:
XP_042180214
LinkDB
All DBs
Position
LG07:30023629..30092396
Genome browser
AA seq
1031 aa
AA seq
DB search
MMLLWKQLVLLSIIGCLAAHAQDVLFQGPRWRTEPSDLILPINFPDQEATIRCEAEGNPT
PQYRWSLNGTLIDLGSDYRRHMSGGNLIVNRLDRDQDTGIYQCTAFNTWGTILSRRATLK
FAYLDNFKTQTTRSAVSVREGQGVVLLCGPPMHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSSPTPLVLRNDGAMGEYEPKIEVHFPDT
VPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIQNFQQEDTGTYE
CVAENSRGKNAARGRISFHAKPHWLQTMIDGALSIEENLFWECKANGKPKPSYSWLKNGD
NLMAEGRRQIENGALSIAALNLSDTGMYQCVAENKHGIIYSSAELMVLASPPSFSKNPLK
ALLKARSGSDVALECKPQASPRAISLWKKGNEIVQRNERITLLPNGTLKIANVTRRDAGS
YTCIAKNPFGTASTTGRLFITEPTRITQRPANMEIIVGESIVLPCQIASDPALDVSFSWA
FNGQLIDFHGDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVINTDVESLSASAILVVKG
PPGPPDTVAVEEITDSTAQLSWKPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEEINGN
TLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDAMPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPLGAVTWTRVVISTPGVARYVFRNDTIPAFSPFDV
KVGAYNNRGEGPFSSIATVFSAEEVPSEAPKRVWGRSVSAAQIEVIWEALPATPERVLGY
EVVYWEDDTKPDTVGKVRISANYSAVNVTGLKANTQYYLALCTFNTAGTGPQSTPINATT
KKPPPGQPPLNVEWTMIGSLLTLHWDPVTAMETEAEVIGYLVLLRRHRDNEVNSIMTNKT
RLELTLSSNDNYLIQIKALSEGGEGVGSEPIHIHKLSMGAQGSGASRLSLLSPSHLSAVL
VSALILLSSSW
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacaacttgtgctgctatcaatcattggttgccttgcagctcat
gcacaagatgtcctgttccaagggccaagatggaggacagagcccagtgacctcattctc
cccatcaacttccctgaccaggaagctaccattagatgtgaggcagaggggaaccccacc
ccacagtacagatggtcgcttaacggaacactcattgatctggggagtgactaccggcgt
cacatgtctgggggcaacctgatcgttaaccgtctggacagggaccaagacacggggata
taccagtgcactgccttcaacacatgggggaccatcctcagccgcagagccactctgaaa
tttgcatacctagataacttcaagacccaaacgacacggagtgctgtcagtgtccgagag
ggccaaggagtggttttgttatgtggaccacccatgcattctggagagctgacatttgca
tggatcttcaatgagtacccatactttgttcagcaagacagtcgtcgattcatctcccag
gagacaggaagtctgtacattgctaaagtggagccttctgatgtgggaaactatacctgt
gtggtcaacaacagcatcactaaggggaaagtcctcagctctcctacaccactggtcctg
aggaatgatggagcaatgggtgaatatgaacccaaaatagaagttcatttccctgacact
gttccagctgcgaagggatccacggtgaaactggaatgtttcgctctgggaaacccagtc
ccagaaataagttggaggagaaccagtggcgtcccgtttcccagtaaggtgaagatgaag
aactccaacgcagtccttgaaattcaaaatttccagcaggaagacactgggacgtatgag
tgtgtggcagaaaatagcagaggcaaaaacgctgcacgaggtcgtatctccttccatgcg
aagccccattggctccagacaatgatcgatggggccctgtccattgaggagaatctgttc
tgggagtgtaaggctaacgggaagcccaagccctcctacagctggctgaagaatggagac
aacctaatggcagagggccggagacaaattgaaaacggggctctctccatagcagcatta
aacctgtcagacaccgggatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagcgctgagctaatggtgttagcatcacctcccagtttctccaagaatccactgaag
gccctgctaaaagctcgctcaggcagtgatgtggctttggagtgcaagccccaagcctcg
ccccgggcaattagcctgtggaagaaaggcaatgagatcgtgcagagaaacgagaggatt
actctgctccccaacgggacactgaagattgccaatgtaaccaggagggatgcgggaagc
tacacgtgcatcgctaagaatccgtttggaactgcaagcaccactggaaggctgtttatc
acagagcccaccagaatcacccagcggcctgctaacatggagatcattgttggcgaaagt
atcgtgctgccctgccagatagccagcgatccagccttggatgtgtctttctcctgggcc
ttcaacgggcagctcatagacttccatggggatgctgaccatttcgacagagtaggaggg
agcatctcaggagatctgatgattcgtaacatccagttgaatcacggaggaaagtatgtc
tgtgttatcaacaccgacgtggagagcttgtctgcttcagccatcttggttgtgaaaggt
ccccccgggcccccggacactgtagcggtggaggagatcacagatagcacagcccagctc
tcctggaaacctggtagggacaatggcagccctatcaccggctacatcatccaggccagg
acacccttcactgtgggctggcaagctgtagacacagttcccgaggaaatcaatggcaac
acgttgacagccactgtagtgggtctgaatgcctgggtggagtatgagttccgggttgtg
gcccgcaacagtgtgggcatgggagagcctagtccagcctcagccaagaccaggacagag
gatgccatgcctgatacagctcccactgatgttggaggcggaggcggcacaaaatctgaa
ttagtgataacttgggagcccgtgcctgaggaactgcagaatggagagggcttcggttac
atcatcgccttccggccactgggtgctgtcacttggacgcgagtggtcatctccacgcct
ggggtcgcccgatacgtcttccgcaacgacaccatcccggccttctctccgttcgatgtg
aaggttggggcgtacaacaaccgcggggaggggcctttcagttccatagccacagtgttt
tcagcagaggaagtccccagtgaggctcctaagagggtttggggcaggagtgtgtctgca
gctcaaattgaagtgatctgggaagccctccctgccacccctgaaagagtgctgggttat
gaggtggtgtattgggaagatgacaccaagcctgacacagtaggcaaagtgagaatctct
gctaactactcagcagtcaacgtgactggactgaaagccaacacacagtattacttggct
ttgtgtacctttaacactgctgggacagggccacagtctacacccataaacgccaccacc
aagaagccaccacctggccagcctcctctgaacgtagagtggaccatgattggatctctg
ctcactctgcactgggatcctgtcacagccatggagacggaggcagaggtcatcggatat
cttgtgctgttgagaagacaccgggataatgaggtaaacagcatcatgacaaacaaaacc
aggttggagctgacgctgtcttccaacgacaactacctgatccagatcaaggccctgagt
gagggcggtgaaggtgtgggcagcgaacccatccacatccacaaattaagcatgggcgca
cagggctcgggagcgtctcggcttagtctgctgtcgccgtctcatctctctgcagtcctc
gtcagtgctctcatcctcctcagctcctcctggtga
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integrated database retrieval system
