Oncorhynchus tshawytscha (Chinook salmon): 112254361
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Entry
112254361 CDS
T05605
Name
(RefSeq) semaphorin-3F isoform X1
KO
K06840
semaphorin 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_3
Ig_2
ig
I-set
PSI
Ig_6
V-set
Motif
Other DBs
NCBI-GeneID:
112254361
NCBI-ProteinID:
XP_024282622
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Position
LG07:31538535..31639333
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AA seq
798 aa
AA seq
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MLLDSLWTVHMLLALVVGALCNHNIIDPHAAPRVFISFKELRSTGTAQHFAYLLNTSDYR
ILRMDEDHDRMYVGSKDYILSLDLHDINKEPLILHWPVSQQRKTECVLSGKDTNGECGNF
IRLIEPWNRTHLYVCGTGAYNPICTYVNRGRKPQAAMHLQMPQTGGRASRAAQPNDVSET
LGLKEYIWHLEPGKVESGKGKCSYDPKLNSVSALINGELYAGVYIDFMGTDSAIFRTGKQ
TAMRTDQYNSRWLNDPSFVHVQLIPDSAERNDDKLYFFFRETSAEMGQSPVTQARIGRIC
LNDDGGHCCLVNKWSTFLKARLICSVPGADGIETHFDELRDVYIQPTQDTKNPVIYGVFS
VSGSVFRGSAVCVYSMADIRQVFNGPFAHKEGPNYQWVAYTGKIPYPRPGTCPGGTFTPN
MKSTKDYPDEVINFMRNHPNMYNAVYPMHKRPLVVRTNVDYEFTTITVDQVAAADGNYEV
LFLGTDRGTVQKVIVLPKDDLQTEELVLEEVEVFKVPTPIITMKISSKRQQLYVSSELGV
THLALHRCDVYGEACADCCLARDPYCAWDGKSCSRYSTSQKRSDPFRRSRRQDVKYGNPI
RQCRGFNSNANKNTLEMVQYGVEGSSTFLECQARSPHAAIKWHLQRDNSDRRKEMRSDGR
VLKTEQGLLLRSLQPSDSGVYQCTATEKNFKHTLVKLQLVVLSGRAINNVLVEGGGLGPS
ALQSSAWTPSAGQYKDLLTILSQPEMGLINQYCQDYWQLGDPMMGAIKANDMKELKEQKK
PRNRRHHGEGEDEEEVET
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgctgttggacagtctgtggacggtccacatgctcctggccctggttgtcggggctctg
tgcaatcacaacatcatcgaccctcatgctgcaccccgcgtcttcatctccttcaaagag
ctgaggtccaccggcactgcccaacactttgcctacctgctcaacacgtctgactaccgt
atcctgcgtatggacgaggaccacgaccgcatgtacgttggcagtaaggactacatcctg
tccctggacctgcatgacatcaacaaggagccgctcattctccactggcctgtctctcag
cagaggaagactgagtgtgttctaagtgggaaggacaccaatggcgagtgtgggaacttc
atccgtctgattgagccatggaacaggacccacttgtatgtctgtggtactggggcctac
aaccccatctgcacctacgtcaaccgtggacgcaaaccgcaggccgccatgcacctgcag
atgccccagaccggagggagggctagccgcgcagcccaaccaaacgatgtgtccgaaaca
ctgggactaaaggaatacatatggcatttggagccgggcaaagtggagtctgggaaagga
aagtgctcctacgacccaaagctcaacagcgtctcagctttgatcaacggtgaactctat
gctggggtctacattgacttcatgggaacagactctgccatcttccgtactgggaaacag
accgccatgcgtacagaccagtataactccagatggttaaatgacccgtcctttgtccat
gtgcagctcatccctgacagcgcagagaggaatgacgacaagctttacttcttcttccgt
gagacgtctgctgagatgggccagagtcccgtgactcaggcccgcatcggtcggatctgc
ctgaatgatgatggtggacactgctgcttggtcaacaagtggagcactttcctgaaggca
cggctcatctgctcagtgccgggggccgacgggattgagacgcacttcgacgagctccga
gacgtttacatacagccgacccaggacaccaagaatcctgttatctacggagtcttttcc
gtctcgggctcagtgtttaggggttcagcggtgtgtgtctactccatggcagacatccgc
caggtcttcaatgggcccttcgcccacaaagaagggcccaattaccagtgggtcgcctac
actgggaagatcccctaccctcgacctgggacgtgcccaggtggaacgttcacccccaac
atgaagtccaccaaagactacccagacgaagtcatcaacttcatgaggaaccaccccaac
atgtacaatgcagtgtacccaatgcacaagcgccccctggtggtccggaccaatgtggac
tacgagttcaccaccatcactgtggaccaggtggccgccgcagacgggaactatgaagtg
ctgttcctgggaactgacagggggacagttcagaaggtgattgttctgcccaaagacgac
ctgcagactgaagaactggtcctggaggaggttgaggtgttcaaggttccaactccaatt
ataaccatgaagatttcgtccaaaaggcaacagctctatgtgtcttctgagcttggtgtg
acccacctggccctccaccgctgtgatgtgtatggggaggcgtgtgctgactgctgcctg
gcccgggacccctactgcgcctgggacggaaagtcctgctcccgctactccacctcgcag
aagaggtctgacccctttagacgcagccggaggcaggacgtgaagtacgggaaccccatc
cggcagtgcaggggcttcaactccaatgcgaataagaacaccttggagatggtgcagtat
ggggtggagggcagcagcaccttcctggagtgccaggcccgttctccccacgccgccatc
aagtggcacctgcagagggacaacagtgaccgccggaaagagatgcgctctgacgggcgg
gtcctgaagacagagcaaggtctgctgctgcgttctctccagccctcagactctggggtc
taccagtgcacggccacagagaagaacttcaaacacacgctggtcaagctgcagctggtg
gtcctgtctggccgagccatcaacaacgtcctggtggagggtgggggactggggccatct
gcgctccagtccagcgcttggacgcccagcgcgggtcagtacaaggacctgctgaccatc
ctgagccagccagagatgggcctgatcaaccagtactgtcaggactactggcagctggga
gaccccatgatgggagccatcaaggccaatgacatgaaagagctcaaggagcagaagaaa
ccacgcaaccgccgacatcacggtgagggagaggacgaagaggaggtggagacatga
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