Oncorhynchus tshawytscha (Chinook salmon): 112254376
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Entry
112254376 CDS
T05605
Symbol
si:dkeyp-97e7.9
Name
(RefSeq) DEP domain-containing mTOR-interacting protein isoform X1
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04140
Autophagy - animal
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112254376 (si:dkeyp-97e7.9)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112254376 (si:dkeyp-97e7.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112254376 (si:dkeyp-97e7.9)
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
112254376 (si:dkeyp-97e7.9)
mTORC2 complex
112254376 (si:dkeyp-97e7.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112254376
NCBI-ProteinID:
XP_024282668
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Position
LG07:complement(32165720..32169591)
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AA seq
407 aa
AA seq
DB search
MEKMGSSINRKSMARLHKAKVMIAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAKELTDW
LISNKEAPDQAAAVCLMQHLMDHDIVHHVCDKHPIFKDAKLLYRFRKDDGTFPFNTEVKV
FMRGQRLYEHLITGRDSILQLREEQGVAYQRSIPGCQLMDWLLQNGETESRRQGLEFCRA
LLEHGIIQHVSKKYDFFDSRLLYQFCINFRRRRHLSELLNETDRDKKEGASVHALEDNHA
DSPFVLPKIPPQEESSGFQSAVQPNKPLKMIPNVHQANLNSLQLHASGYLPPATLSSAPV
VRCNPKSVLKRNVTCEELLSPGAPFIKRVLTVMGDAVGWGFVIRGVAPVYVQAVDPGSPA
AAAGVKVRQFVCQVNGRSVLHLDYRQVTRLVMTGPHTVVLEVMEPLG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgggaagcagcataaacagaaaatcaatggccagactgcacaaggctaaa
gttatgattgctggagaacaactgaggttgaggctgcatgatggcaaactgatcaaggat
cgacggtaccatctgcgcacttaccccaactgctttgtagccaaagagcttacagactgg
ttgatcagcaacaaggaagctcccgatcaggccgcagcggtctgcctcatgcaacacctg
atggaccatgacattgtgcaccatgtttgtgacaagcaccctatattcaaggatgcaaaa
ttgctgtaccgtttccgtaaggatgatggcacatttccatttaacaccgaggtgaaggtc
ttcatgcgaggacaacgattgtatgagcatctaataacaggcagagactccattctgcaa
ctaagggaggagcagggtgttgcataccagcgctccatccctggctgccagttgatggac
tggttgttacagaatggagagacggagagtaggcgccagggtttggagttctgccgtgct
ttgctagagcatggcatcattcagcatgtgtcaaagaagtacgacttctttgacagtaga
ttactgtatcagttctgcatcaattttcgccgccggcgccacctgtctgagctcttgaat
gaaactgatcgagacaaaaaggaaggtgcatcagtgcatgcactggaggacaaccatgcc
gacagcccctttgtcctgcccaagatccccccacaagaggaaagcagtggttttcaatct
gcagtgcagcccaataaaccattgaagatgatacccaatgtgcatcaggccaatttgaac
tctctgcagctacatgctagtggatatttaccccctgccacactctcctctgccccagtg
gtgagatgcaatccaaaatcagtgcttaagaggaatgtaacatgtgaggagctactgtcc
cctggtgcacctttcatcaagagagtgttgacggtgatgggagatgcagtgggctggggc
tttgtgatcagaggtgtggctccagtttacgtgcaggcagtcgatcctggaagccctgct
gctgctgcaggggttaaggtgcgtcagtttgtgtgccaggtgaatgggcggagcgttctt
cacctggattaccgccaggtcaccaggttggtgatgaccggacctcacactgttgtgttg
gaggtcatggaaccactggggtga
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